EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004616 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4118 bases
Position: chrreftig_79:448368-452485
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007722	2OG-FeII_Oxy	PF03171.20	5.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007822	-	1282	-	ENSCSAVP00000007722	323 (aa)	-	H2YQW2

Gene Model

Click here to download ENSCSAVG00000004616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004616	-	98	42.006	ENSCSAVG00000000201	-	94	47.297
ENSCSAVG00000004616	-	74	41.494	ENSCSAVG00000001337	-	99	41.494
ENSCSAVG00000004616	-	53	38.596	ENSCSAVG00000004871	-	89	38.596
ENSCSAVG00000004616	-	53	55.233	ENSCSAVG00000001775	-	100	55.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004616	-	75	38.525	ENSAPOG00000011678	si:dkey-10o6.2	79	38.525	Acanthochromis_polyacanthus
ENSCSAVG00000004616	-	93	37.658	ENSACIG00000024115	si:dkey-10o6.2	97	37.658	Amphilophus_citrinellus
ENSCSAVG00000004616	-	98	35.347	ENSACIG00000011675	-	98	35.347	Amphilophus_citrinellus
ENSCSAVG00000004616	-	99	35.821	ENSAOCG00000013068	si:dkey-10o6.2	99	35.821	Amphiprion_ocellaris
ENSCSAVG00000004616	-	99	35.135	ENSAPEG00000011246	si:dkey-10o6.2	99	35.135	Amphiprion_percula
ENSCSAVG00000004616	-	98	36.254	ENSATEG00000021945	si:dkey-10o6.2	98	36.254	Anabas_testudineus
ENSCSAVG00000004616	-	98	38.720	ENSATEG00000000030	si:dkey-10o6.2	98	38.720	Anabas_testudineus
ENSCSAVG00000004616	-	98	37.805	ENSATEG00000021952	si:dkey-10o6.2	98	37.805	Anabas_testudineus
ENSCSAVG00000004616	-	99	34.036	ENSACLG00000023011	si:dkey-10o6.2	99	34.036	Astatotilapia_calliptera
ENSCSAVG00000004616	-	99	37.117	ENSAMXG00000021555	si:dkey-10o6.2	99	37.117	Astyanax_mexicanus
ENSCSAVG00000004616	-	98	44.514	ENSCING00000012500	-	97	44.514	Ciona_intestinalis
ENSCSAVG00000004616	-	99	36.970	ENSCING00000007255	-	99	36.970	Ciona_intestinalis
ENSCSAVG00000004616	-	74	68.201	ENSCING00000011926	-	100	68.201	Ciona_intestinalis
ENSCSAVG00000004616	-	97	47.937	ENSCING00000022311	-	97	47.937	Ciona_intestinalis
ENSCSAVG00000004616	-	100	49.847	ENSCING00000016920	-	95	49.847	Ciona_intestinalis
ENSCSAVG00000004616	-	98	34.365	ENSCSEG00000000918	si:dkey-10o6.2	97	34.365	Cynoglossus_semilaevis
ENSCSAVG00000004616	-	98	35.562	ENSCSEG00000000927	si:dkey-10o6.2	98	35.562	Cynoglossus_semilaevis
ENSCSAVG00000004616	-	98	37.425	ENSCVAG00000015074	si:dkey-10o6.2	98	37.425	Cyprinodon_variegatus
ENSCSAVG00000004616	-	88	39.116	ENSDARG00000074628	si:dkey-10o6.2	80	39.116	Danio_rerio
ENSCSAVG00000004616	-	88	30.976	FBgn0053093	CG33093	85	30.976	Drosophila_melanogaster
ENSCSAVG00000004616	-	87	38.408	ENSELUG00000003488	si:dkey-10o6.2	90	38.408	Esox_lucius
ENSCSAVG00000004616	-	99	35.821	ENSFHEG00000019035	si:dkey-10o6.2	99	35.821	Fundulus_heteroclitus
ENSCSAVG00000004616	-	88	38.721	ENSGMOG00000018989	si:dkey-10o6.2	93	38.721	Gadus_morhua
ENSCSAVG00000004616	-	98	36.254	ENSGAFG00000006137	si:dkey-10o6.2	98	36.254	Gambusia_affinis
ENSCSAVG00000004616	-	98	35.799	ENSGACG00000006806	si:dkey-10o6.2	98	35.799	Gasterosteus_aculeatus
ENSCSAVG00000004616	-	99	34.036	ENSHBUG00000008853	si:dkey-10o6.2	99	34.036	Haplochromis_burtoni
ENSCSAVG00000004616	-	88	35.959	ENSHCOG00000017671	-	90	35.959	Hippocampus_comes
ENSCSAVG00000004616	-	88	37.716	ENSHCOG00000017626	si:dkey-10o6.2	90	37.716	Hippocampus_comes
ENSCSAVG00000004616	-	88	39.057	ENSIPUG00000018911	-	91	39.057	Ictalurus_punctatus
ENSCSAVG00000004616	-	88	38.721	ENSIPUG00000018879	si:dkey-10o6.2	77	38.806	Ictalurus_punctatus
ENSCSAVG00000004616	-	98	34.545	ENSKMAG00000006197	si:dkey-10o6.2	98	34.545	Kryptolebias_marmoratus
ENSCSAVG00000004616	-	99	36.615	ENSLBEG00000003823	si:dkey-10o6.2	89	36.615	Labrus_bergylta
ENSCSAVG00000004616	-	80	38.023	ENSLBEG00000003839	si:dkey-10o6.2	82	38.023	Labrus_bergylta
ENSCSAVG00000004616	-	98	35.866	ENSMAMG00000023022	si:dkey-10o6.2	98	35.866	Mastacembelus_armatus
ENSCSAVG00000004616	-	98	36.446	ENSMAMG00000023020	si:dkey-10o6.2	98	36.446	Mastacembelus_armatus
ENSCSAVG00000004616	-	98	35.347	ENSMAMG00000023026	-	98	35.347	Mastacembelus_armatus
ENSCSAVG00000004616	-	98	35.542	ENSMAMG00000023025	-	98	35.542	Mastacembelus_armatus
ENSCSAVG00000004616	-	99	34.337	ENSMZEG00005012018	si:dkey-10o6.2	99	34.337	Maylandia_zebra
ENSCSAVG00000004616	-	78	38.760	ENSMMOG00000020383	si:dkey-10o6.2	78	38.760	Mola_mola
ENSCSAVG00000004616	-	98	36.391	ENSMALG00000011300	si:dkey-10o6.2	98	36.391	Monopterus_albus
ENSCSAVG00000004616	-	99	32.831	ENSNBRG00000015840	si:dkey-10o6.2	99	32.831	Neolamprologus_brichardi
ENSCSAVG00000004616	-	99	34.639	ENSONIG00000015572	si:dkey-10o6.2	99	34.639	Oreochromis_niloticus
ENSCSAVG00000004616	-	99	35.692	ENSORLG00000001314	si:dkey-10o6.2	99	35.692	Oryzias_latipes
ENSCSAVG00000004616	-	99	34.639	ENSORLG00020002660	si:dkey-10o6.2	99	34.639	Oryzias_latipes_hni
ENSCSAVG00000004616	-	99	35.736	ENSOMEG00000003617	si:dkey-10o6.2	96	35.736	Oryzias_melastigma
ENSCSAVG00000004616	-	98	34.251	ENSPKIG00000024109	-	97	34.251	Paramormyrops_kingsleyae
ENSCSAVG00000004616	-	91	36.242	ENSPKIG00000004206	si:dkey-10o6.2	75	36.242	Paramormyrops_kingsleyae
ENSCSAVG00000004616	-	87	35.959	ENSPKIG00000004183	si:dkey-10o6.2	79	35.959	Paramormyrops_kingsleyae
ENSCSAVG00000004616	-	99	33.841	ENSPMGG00000021603	si:dkey-10o6.2	99	33.841	Periophthalmus_magnuspinnatus
ENSCSAVG00000004616	-	98	35.494	ENSPFOG00000017244	si:dkey-10o6.2	97	35.494	Poecilia_formosa
ENSCSAVG00000004616	-	87	38.194	ENSPLAG00000008037	si:dkey-10o6.2	90	38.194	Poecilia_latipinna
ENSCSAVG00000004616	-	69	39.381	ENSPMEG00000020748	si:dkey-10o6.2	94	39.381	Poecilia_mexicana
ENSCSAVG00000004616	-	98	35.913	ENSPREG00000005108	si:dkey-10o6.2	98	35.913	Poecilia_reticulata
ENSCSAVG00000004616	-	99	34.337	ENSPNYG00000010698	si:dkey-10o6.2	99	34.337	Pundamilia_nyererei
ENSCSAVG00000004616	-	74	37.759	ENSPNAG00000014485	-	71	37.759	Pygocentrus_nattereri
ENSCSAVG00000004616	-	87	41.096	ENSPNAG00000014123	si:dkey-10o6.2	88	41.096	Pygocentrus_nattereri
ENSCSAVG00000004616	-	96	37.072	ENSSFOG00015015345	si:dkey-10o6.2	99	37.072	Scleropages_formosus
ENSCSAVG00000004616	-	87	42.177	ENSSMAG00000019016	si:dkey-10o6.2	90	42.177	Scophthalmus_maximus
ENSCSAVG00000004616	-	98	37.092	ENSSDUG00000000943	si:dkey-10o6.2	98	37.092	Seriola_dumerili
ENSCSAVG00000004616	-	98	36.795	ENSSLDG00000003462	si:dkey-10o6.2	98	36.795	Seriola_lalandi_dorsalis
ENSCSAVG00000004616	-	98	37.160	ENSSPAG00000020962	si:dkey-10o6.2	98	37.160	Stegastes_partitus
ENSCSAVG00000004616	-	88	35.374	ENSTRUG00000019532	si:dkey-10o6.2	90	35.374	Takifugu_rubripes
ENSCSAVG00000004616	-	98	35.843	ENSXCOG00000000855	si:dkey-10o6.2	98	35.843	Xiphophorus_couchianus
ENSCSAVG00000004616	-	98	35.045	ENSXMAG00000012432	si:dkey-10o6.2	98	35.045	Xiphophorus_maculatus