EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004652 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3069 bases
Position: chrreftig_194:2559-5627
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007789	PARP	PF00644.20	5.2e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007892	-	1092	-	ENSCSAVP00000007789	212 (aa)	-	H2YR29

Gene Model

Click here to download ENSCSAVG00000004652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004652	-	85	33.333	ENSCSAVG00000005358	-	75	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004652	-	100	45.581	WBGene00004049	parp-1	95	40.476	Caenorhabditis_elegans
ENSCSAVG00000004652	-	98	63.462	MGP_CAROLIEiJ_G0014978	Parp1	100	61.765	Mus_caroli
ENSCSAVG00000004652	-	98	63.462	ENSMUSG00000026496	Parp1	99	61.765	Mus_musculus
ENSCSAVG00000004652	-	98	63.462	MGP_SPRETEiJ_G0015777	Parp1	100	61.765	Mus_spretus
ENSCSAVG00000004652	-	99	62.857	ENSRBIG00000044893	PARP1	50	62.857	Rhinopithecus_bieti
ENSCSAVG00000004652	-	99	62.857	ENSRROG00000029280	PARP1	50	62.857	Rhinopithecus_roxellana
ENSCSAVG00000004652	-	98	52.404	ENSRROG00000040615	-	55	52.404	Rhinopithecus_roxellana