EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004679 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 5665 bases
Position: chrreftig_410:188311-193975
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007824	MRP-S27	PF10037.9	9.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007928	-	1057	-	ENSCSAVP00000007823	293 (aa)	-	H2YR63
ENSCSAVT00000007929	-	846	-	ENSCSAVP00000007824	257 (aa)	-	H2YR64

Gene Model

Click here to download ENSCSAVG00000004679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004679	-	78	35.377	ENSG00000113048	MRPS27	66	41.538	Homo_sapiens
ENSCSAVG00000004679	-	87	35.242	ENSACIG00000004470	mrps27	56	35.242	Amphilophus_citrinellus
ENSCSAVG00000004679	-	78	35.377	ENSCATG00000034419	MRPS27	53	36.869	Cercocebus_atys
ENSCSAVG00000004679	-	78	35.071	ENSCHOG00000002565	MRPS27	53	35.071	Choloepus_hoffmanni
ENSCSAVG00000004679	-	95	33.871	ENSCPBG00000000195	MRPS27	58	33.871	Chrysemys_picta_bellii
ENSCSAVG00000004679	-	82	36.364	ENSCGRG00001016241	Mrps27	50	36.364	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004679	-	82	36.364	ENSCGRG00000005290	Mrps27	50	36.364	Cricetulus_griseus_crigri
ENSCSAVG00000004679	-	82	35.648	ENSDARG00000059234	mrps27	52	35.648	Danio_rerio
ENSCSAVG00000004679	-	75	34.483	ENSDNOG00000008698	MRPS27	52	34.483	Dasypus_novemcinctus
ENSCSAVG00000004679	-	92	33.469	ENSEBUG00000008346	mrps27	55	33.469	Eptatretus_burgeri
ENSCSAVG00000004679	-	91	32.400	ENSFCAG00000005452	MRPS27	57	32.400	Felis_catus
ENSCSAVG00000004679	-	88	33.193	ENSFALG00000010306	MRPS27	57	33.193	Ficedula_albicollis
ENSCSAVG00000004679	-	90	33.333	ENSGALG00000015002	MRPS27	57	33.333	Gallus_gallus
ENSCSAVG00000004679	-	79	37.264	ENSGAFG00000010539	mrps27	52	37.264	Gambusia_affinis
ENSCSAVG00000004679	-	75	34.848	ENSHGLG00000001577	MRPS27	52	34.848	Heterocephalus_glaber_female
ENSCSAVG00000004679	-	88	32.618	ENSHGLG00100006845	MRPS27	56	32.618	Heterocephalus_glaber_male
ENSCSAVG00000004679	-	50	40.769	ENSJJAG00000015087	-	65	40.769	Jaculus_jaculus
ENSCSAVG00000004679	-	82	36.574	ENSLACG00000014327	MRPS27	50	36.574	Latimeria_chalumnae
ENSCSAVG00000004679	-	98	35.271	ENSLOCG00000011134	mrps27	58	35.271	Lepisosteus_oculatus
ENSCSAVG00000004679	-	86	33.476	ENSMICG00000004527	MRPS27	98	33.838	Microcebus_murinus
ENSCSAVG00000004679	-	87	33.480	ENSMMOG00000013203	mrps27	59	34.634	Mola_mola
ENSCSAVG00000004679	-	93	32.540	ENSMODG00000001687	MRPS27	55	32.540	Monodelphis_domestica
ENSCSAVG00000004679	-	78	35.714	ENSMUSG00000041632	Mrps27	81	30.279	Mus_musculus
ENSCSAVG00000004679	-	72	31.053	ENSNBRG00000011162	-	93	32.461	Neolamprologus_brichardi
ENSCSAVG00000004679	-	50	41.538	ENSNLEG00000032219	-	66	41.538	Nomascus_leucogenys
ENSCSAVG00000004679	-	75	37.374	ENSODEG00000016210	MRPS27	52	37.374	Octodon_degus
ENSCSAVG00000004679	-	51	46.617	ENSORLG00000003800	mrps27	73	46.617	Oryzias_latipes
ENSCSAVG00000004679	-	74	31.658	ENSOGAG00000008385	MRPS27	52	31.658	Otolemur_garnettii
ENSCSAVG00000004679	-	95	31.835	ENSPPAG00000038112	MRPS27	52	31.835	Pan_paniscus
ENSCSAVG00000004679	-	91	32.400	ENSPPRG00000014416	MRPS27	66	40.769	Panthera_pardus
ENSCSAVG00000004679	-	91	32.400	ENSPTIG00000020435	MRPS27	66	40.769	Panthera_tigris_altaica
ENSCSAVG00000004679	-	95	31.835	ENSPTRG00000016967	MRPS27	53	35.468	Pan_troglodytes
ENSCSAVG00000004679	-	93	33.469	ENSPSIG00000014565	MRPS27	59	33.469	Pelodiscus_sinensis
ENSCSAVG00000004679	-	79	35.885	ENSPMGG00000017275	mrps27	59	35.266	Periophthalmus_magnuspinnatus
ENSCSAVG00000004679	-	75	31.019	ENSPMAG00000009772	mrps27	63	31.019	Petromyzon_marinus
ENSCSAVG00000004679	-	79	37.264	ENSPFOG00000007317	mrps27	56	37.264	Poecilia_formosa
ENSCSAVG00000004679	-	70	38.378	ENSPLAG00000004766	MRPS27	91	38.378	Poecilia_latipinna
ENSCSAVG00000004679	-	51	42.857	ENSPREG00000015143	mrps27	68	42.857	Poecilia_reticulata
ENSCSAVG00000004679	-	86	33.906	ENSPCOG00000028430	MRPS27	66	41.538	Propithecus_coquereli
ENSCSAVG00000004679	-	82	33.953	ENSPNAG00000008002	mrps27	50	33.953	Pygocentrus_nattereri
ENSCSAVG00000004679	-	61	31.953	ENSSHAG00000011388	-	53	31.953	Sarcophilus_harrisii
ENSCSAVG00000004679	-	82	35.185	ENSSDUG00000001883	mrps27	50	35.185	Seriola_dumerili
ENSCSAVG00000004679	-	51	40.602	ENSSLDG00000019470	mrps27	71	40.602	Seriola_lalandi_dorsalis
ENSCSAVG00000004679	-	79	35.849	ENSSPUG00000000182	MRPS27	53	35.849	Sphenodon_punctatus
ENSCSAVG00000004679	-	86	32.906	ENSTGUG00000005691	MRPS27	56	32.906	Taeniopygia_guttata
ENSCSAVG00000004679	-	88	33.333	ENSTTRG00000011837	MRPS27	53	33.333	Tursiops_truncatus
ENSCSAVG00000004679	-	78	35.071	ENSUAMG00000007585	MRPS27	52	34.975	Ursus_americanus
ENSCSAVG00000004679	-	81	32.895	ENSXETG00000034180	MRPS27	60	31.600	Xenopus_tropicalis
ENSCSAVG00000004679	-	70	37.838	ENSXCOG00000007727	mrps27	87	37.838	Xiphophorus_couchianus