EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004697 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 13559 bases
Position: chrreftig_37:1095348-1108906
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000007858	IF-2	PF11987.8	1.3e-28	1	1
ENSCSAVP00000007858	GTP_EFTU	PF00009.27	4.2e-32	1	1
ENSCSAVP00000007859	GTP_EFTU	PF00009.27	6.3e-17	1	1
ENSCSAVP00000007858	MMR_HSR1	PF01926.23	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000007962	-	410	-	ENSCSAVP00000007857	118 (aa)	-	H2YR97
ENSCSAVT00000007963	-	1921	-	ENSCSAVP00000007858	436 (aa)	-	H2YR98
ENSCSAVT00000007964	-	559	-	ENSCSAVP00000007859	120 (aa)	-	H2YR99

Gene Model

Click here to download ENSCSAVG00000004697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004697	-	98	52.542	ENSG00000085760	MTIF2	97	32.448	Homo_sapiens
ENSCSAVG00000004697	-	98	54.237	ENSAPOG00000007546	mtif2	71	46.154	Acanthochromis_polyacanthus
ENSCSAVG00000004697	-	98	54.237	ENSAMEG00000003983	MTIF2	60	47.032	Ailuropoda_melanoleuca
ENSCSAVG00000004697	-	98	55.085	ENSACIG00000007794	mtif2	64	45.025	Amphilophus_citrinellus
ENSCSAVG00000004697	-	98	54.237	ENSAOCG00000011132	mtif2	63	45.045	Amphiprion_ocellaris
ENSCSAVG00000004697	-	98	54.237	ENSAPEG00000015985	mtif2	65	45.067	Amphiprion_percula
ENSCSAVG00000004697	-	98	51.695	ENSATEG00000015320	mtif2	62	43.237	Anabas_testudineus
ENSCSAVG00000004697	-	98	55.932	ENSACAG00000003328	MTIF2	61	47.285	Anolis_carolinensis
ENSCSAVG00000004697	-	98	52.542	ENSANAG00000036247	MTIF2	59	46.991	Aotus_nancymaae
ENSCSAVG00000004697	-	98	55.085	ENSACLG00000003856	mtif2	61	44.266	Astatotilapia_calliptera
ENSCSAVG00000004697	-	98	51.695	ENSAMXG00000013112	mtif2	60	43.864	Astyanax_mexicanus
ENSCSAVG00000004697	-	98	50.000	ENSBTAG00000015481	MTIF2	60	46.575	Bos_taurus
ENSCSAVG00000004697	-	98	52.542	ENSCJAG00000010030	MTIF2	59	47.465	Callithrix_jacchus
ENSCSAVG00000004697	-	98	52.542	ENSCAFG00000002829	MTIF2	64	48.387	Canis_familiaris
ENSCSAVG00000004697	-	98	52.542	ENSCAFG00020026538	MTIF2	59	48.387	Canis_lupus_dingo
ENSCSAVG00000004697	-	98	50.847	ENSCHIG00000010297	MTIF2	60	47.032	Capra_hircus
ENSCSAVG00000004697	-	98	51.695	ENSTSYG00000000850	MTIF2	59	46.774	Carlito_syrichta
ENSCSAVG00000004697	-	98	48.305	ENSCAPG00000014189	MTIF2	68	41.558	Cavia_aperea
ENSCSAVG00000004697	-	98	51.695	ENSCPOG00000005823	MTIF2	60	46.437	Cavia_porcellus
ENSCSAVG00000004697	-	98	52.542	ENSCCAG00000022488	MTIF2	60	46.911	Cebus_capucinus
ENSCSAVG00000004697	-	98	51.695	ENSCATG00000038926	MTIF2	59	46.651	Cercocebus_atys
ENSCSAVG00000004697	-	98	55.932	ENSCLAG00000007900	MTIF2	60	48.506	Chinchilla_lanigera
ENSCSAVG00000004697	-	98	52.542	ENSCSAG00000014153	MTIF2	59	46.296	Chlorocebus_sabaeus
ENSCSAVG00000004697	-	81	52.381	ENSCHOG00000012644	MTIF2	51	52.381	Choloepus_hoffmanni
ENSCSAVG00000004697	-	98	55.085	ENSCPBG00000020894	MTIF2	59	49.254	Chrysemys_picta_bellii
ENSCSAVG00000004697	-	98	77.966	ENSCING00000000152	-	78	69.767	Ciona_intestinalis
ENSCSAVG00000004697	-	98	51.695	ENSCANG00000030529	MTIF2	59	46.065	Colobus_angolensis_palliatus
ENSCSAVG00000004697	-	98	51.695	ENSCGRG00001019217	Mtif2	60	47.018	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004697	-	98	51.695	ENSCGRG00000016517	Mtif2	60	47.018	Cricetulus_griseus_crigri
ENSCSAVG00000004697	-	98	50.847	ENSCSEG00000001309	mtif2	71	45.960	Cynoglossus_semilaevis
ENSCSAVG00000004697	-	98	55.932	ENSCVAG00000007185	mtif2	61	44.804	Cyprinodon_variegatus
ENSCSAVG00000004697	-	98	52.542	ENSDARG00000063213	mtif2	61	46.744	Danio_rerio
ENSCSAVG00000004697	-	98	51.695	ENSDNOG00000004817	MTIF2	58	47.143	Dasypus_novemcinctus
ENSCSAVG00000004697	-	98	50.847	ENSDORG00000006292	Mtif2	60	44.851	Dipodomys_ordii
ENSCSAVG00000004697	-	98	50.000	FBgn0039588	mIF2	61	42.263	Drosophila_melanogaster
ENSCSAVG00000004697	-	98	42.466	ENSETEG00000001075	MTIF2	60	42.466	Echinops_telfairi
ENSCSAVG00000004697	-	98	54.237	ENSEBUG00000011845	mtif2	68	39.030	Eptatretus_burgeri
ENSCSAVG00000004697	-	98	50.847	ENSEASG00005000740	MTIF2	59	48.883	Equus_asinus_asinus
ENSCSAVG00000004697	-	98	50.847	ENSECAG00000009169	MTIF2	59	47.235	Equus_caballus
ENSCSAVG00000004697	-	98	50.000	ENSELUG00000003685	mtif2	62	47.368	Esox_lucius
ENSCSAVG00000004697	-	98	52.542	ENSFCAG00000013626	MTIF2	60	46.804	Felis_catus
ENSCSAVG00000004697	-	98	53.390	ENSFALG00000011256	MTIF2	53	45.581	Ficedula_albicollis
ENSCSAVG00000004697	-	98	52.542	ENSFDAG00000007307	MTIF2	59	45.833	Fukomys_damarensis
ENSCSAVG00000004697	-	98	55.932	ENSGMOG00000000221	mtif2	68	43.973	Gadus_morhua
ENSCSAVG00000004697	-	98	51.695	ENSGALG00000031265	MTIF2	59	45.139	Gallus_gallus
ENSCSAVG00000004697	-	98	56.780	ENSGAFG00000014766	mtif2	63	46.313	Gambusia_affinis
ENSCSAVG00000004697	-	98	55.932	ENSGACG00000019926	mtif2	66	46.501	Gasterosteus_aculeatus
ENSCSAVG00000004697	-	98	55.932	ENSGAGG00000014724	MTIF2	59	47.917	Gopherus_agassizii
ENSCSAVG00000004697	-	98	52.542	ENSGGOG00000007681	MTIF2	59	45.747	Gorilla_gorilla
ENSCSAVG00000004697	-	98	55.085	ENSHBUG00000014269	mtif2	72	57.143	Haplochromis_burtoni
ENSCSAVG00000004697	-	98	53.390	ENSHGLG00000009152	-	59	47.005	Heterocephalus_glaber_female
ENSCSAVG00000004697	-	93	38.119	ENSHGLG00000013021	-	57	38.119	Heterocephalus_glaber_female
ENSCSAVG00000004697	-	98	53.390	ENSHGLG00100012609	MTIF2	59	47.005	Heterocephalus_glaber_male
ENSCSAVG00000004697	-	98	49.153	ENSHCOG00000011607	mtif2	63	40.535	Hippocampus_comes
ENSCSAVG00000004697	-	98	52.542	ENSIPUG00000013801	mtif2	62	45.139	Ictalurus_punctatus
ENSCSAVG00000004697	-	98	52.542	ENSSTOG00000028059	MTIF2	59	47.696	Ictidomys_tridecemlineatus
ENSCSAVG00000004697	-	98	52.542	ENSJJAG00000017300	Mtif2	63	46.789	Jaculus_jaculus
ENSCSAVG00000004697	-	98	53.390	ENSKMAG00000014876	mtif2	69	44.952	Kryptolebias_marmoratus
ENSCSAVG00000004697	-	98	55.085	ENSLBEG00000013573	mtif2	62	45.721	Labrus_bergylta
ENSCSAVG00000004697	-	98	52.542	ENSLACG00000007159	MTIF2	60	44.647	Latimeria_chalumnae
ENSCSAVG00000004697	-	98	55.085	ENSLOCG00000015555	mtif2	61	44.244	Lepisosteus_oculatus
ENSCSAVG00000004697	-	98	51.695	ENSLAFG00000007341	MTIF2	65	46.544	Loxodonta_africana
ENSCSAVG00000004697	-	98	51.695	ENSMFAG00000044949	MTIF2	59	46.189	Macaca_fascicularis
ENSCSAVG00000004697	-	98	51.695	ENSMMUG00000030833	MTIF2	65	46.420	Macaca_mulatta
ENSCSAVG00000004697	-	98	51.695	ENSMNEG00000034768	MTIF2	59	46.189	Macaca_nemestrina
ENSCSAVG00000004697	-	98	51.695	ENSMLEG00000031165	MTIF2	69	46.651	Mandrillus_leucophaeus
ENSCSAVG00000004697	-	98	54.237	ENSMAMG00000017811	mtif2	62	45.270	Mastacembelus_armatus
ENSCSAVG00000004697	-	98	55.085	ENSMZEG00005010545	mtif2	69	44.266	Maylandia_zebra
ENSCSAVG00000004697	-	98	51.695	ENSMGAG00000002262	MTIF2	59	45.872	Meleagris_gallopavo
ENSCSAVG00000004697	-	98	44.521	ENSMAUG00000014969	Mtif2	58	44.521	Mesocricetus_auratus
ENSCSAVG00000004697	-	98	51.695	ENSMICG00000017441	MTIF2	60	46.101	Microcebus_murinus
ENSCSAVG00000004697	-	98	53.390	ENSMOCG00000012426	Mtif2	60	46.330	Microtus_ochrogaster
ENSCSAVG00000004697	-	98	55.085	ENSMMOG00000018443	mtif2	68	45.351	Mola_mola
ENSCSAVG00000004697	-	98	54.237	ENSMODG00000001833	MTIF2	60	47.072	Monodelphis_domestica
ENSCSAVG00000004697	-	98	54.237	ENSMALG00000006521	mtif2	60	44.796	Monopterus_albus
ENSCSAVG00000004697	-	98	54.237	MGP_CAROLIEiJ_G0016158	Mtif2	54	60.185	Mus_caroli
ENSCSAVG00000004697	-	98	54.237	ENSMUSG00000020459	Mtif2	54	60.648	Mus_musculus
ENSCSAVG00000004697	-	98	54.237	MGP_PahariEiJ_G0016732	Mtif2	54	60.185	Mus_pahari
ENSCSAVG00000004697	-	98	54.237	MGP_SPRETEiJ_G0017001	Mtif2	54	60.648	Mus_spretus
ENSCSAVG00000004697	-	98	51.695	ENSMPUG00000010461	MTIF2	59	47.696	Mustela_putorius_furo
ENSCSAVG00000004697	-	98	50.000	ENSMLUG00000017067	-	59	46.774	Myotis_lucifugus
ENSCSAVG00000004697	-	98	50.000	ENSMLUG00000025691	-	71	59.239	Myotis_lucifugus
ENSCSAVG00000004697	-	98	53.390	ENSNGAG00000023658	Mtif2	60	47.248	Nannospalax_galili
ENSCSAVG00000004697	-	98	51.695	ENSNLEG00000009228	MTIF2	59	45.497	Nomascus_leucogenys
ENSCSAVG00000004697	-	98	52.542	ENSMEUG00000008935	MTIF2	67	44.570	Notamacropus_eugenii
ENSCSAVG00000004697	-	98	53.390	ENSOPRG00000010479	MTIF2	54	43.401	Ochotona_princeps
ENSCSAVG00000004697	-	98	53.390	ENSODEG00000013203	MTIF2	60	47.717	Octodon_degus
ENSCSAVG00000004697	-	98	54.237	ENSONIG00000007239	mtif2	61	44.495	Oreochromis_niloticus
ENSCSAVG00000004697	-	98	50.847	ENSOANG00000011187	MTIF2	61	44.796	Ornithorhynchus_anatinus
ENSCSAVG00000004697	-	98	52.542	ENSOCUG00000003617	MTIF2	66	47.926	Oryctolagus_cuniculus
ENSCSAVG00000004697	-	98	57.627	ENSORLG00000026006	mtif2	58	45.045	Oryzias_latipes
ENSCSAVG00000004697	-	98	56.780	ENSORLG00020022048	mtif2	62	45.045	Oryzias_latipes_hni
ENSCSAVG00000004697	-	98	52.542	ENSOGAG00000004306	MTIF2	60	47.260	Otolemur_garnettii
ENSCSAVG00000004697	-	98	51.695	ENSOARG00000002596	MTIF2	60	47.260	Ovis_aries
ENSCSAVG00000004697	-	98	52.542	ENSPPAG00000039404	-	69	44.231	Pan_paniscus
ENSCSAVG00000004697	-	98	52.542	ENSPPRG00000004891	MTIF2	60	46.575	Panthera_pardus
ENSCSAVG00000004697	-	98	52.542	ENSPTIG00000020552	MTIF2	60	46.575	Panthera_tigris_altaica
ENSCSAVG00000004697	-	98	52.542	ENSPTRG00000011929	MTIF2	59	46.207	Pan_troglodytes
ENSCSAVG00000004697	-	98	51.695	ENSPANG00000014549	MTIF2	59	46.189	Papio_anubis
ENSCSAVG00000004697	-	98	55.932	ENSPKIG00000021512	mtif2	60	45.227	Paramormyrops_kingsleyae
ENSCSAVG00000004697	-	98	53.390	ENSPSIG00000012738	MTIF2	59	47.356	Pelodiscus_sinensis
ENSCSAVG00000004697	-	98	54.237	ENSPMGG00000008013	mtif2	75	42.725	Periophthalmus_magnuspinnatus
ENSCSAVG00000004697	-	98	52.542	ENSPEMG00000022952	Mtif2	60	46.789	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004697	-	98	55.932	ENSPMAG00000005400	mtif2	68	44.444	Petromyzon_marinus
ENSCSAVG00000004697	-	98	54.237	ENSPCIG00000010405	MTIF2	56	49.760	Phascolarctos_cinereus
ENSCSAVG00000004697	-	98	57.627	ENSPFOG00000018485	mtif2	63	46.330	Poecilia_formosa
ENSCSAVG00000004697	-	98	57.627	ENSPLAG00000005403	mtif2	63	46.330	Poecilia_latipinna
ENSCSAVG00000004697	-	98	57.627	ENSPMEG00000022347	mtif2	62	46.560	Poecilia_mexicana
ENSCSAVG00000004697	-	98	58.475	ENSPREG00000005632	mtif2	62	47.005	Poecilia_reticulata
ENSCSAVG00000004697	-	98	51.695	ENSPPYG00000012403	MTIF2	59	45.517	Pongo_abelii
ENSCSAVG00000004697	-	86	48.057	ENSPCAG00000007183	MTIF2	52	48.057	Procavia_capensis
ENSCSAVG00000004697	-	98	52.542	ENSPCOG00000013936	MTIF2	59	46.759	Propithecus_coquereli
ENSCSAVG00000004697	-	98	50.847	ENSPVAG00000016474	MTIF2	62	46.171	Pteropus_vampyrus
ENSCSAVG00000004697	-	98	54.237	ENSPNYG00000016432	mtif2	61	43.807	Pundamilia_nyererei
ENSCSAVG00000004697	-	98	54.237	ENSPNAG00000006293	mtif2	62	44.318	Pygocentrus_nattereri
ENSCSAVG00000004697	-	98	54.237	ENSRNOG00000004161	Mtif2	58	45.561	Rattus_norvegicus
ENSCSAVG00000004697	-	98	53.390	ENSSBOG00000026993	MTIF2	59	47.454	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004697	-	98	51.695	ENSSHAG00000004418	MTIF2	60	46.847	Sarcophilus_harrisii
ENSCSAVG00000004697	-	98	51.695	ENSSFOG00015017713	mtif2	65	47.118	Scleropages_formosus
ENSCSAVG00000004697	-	98	50.847	ENSSMAG00000021040	mtif2	70	44.691	Scophthalmus_maximus
ENSCSAVG00000004697	-	98	56.780	ENSSDUG00000021733	mtif2	61	45.622	Seriola_dumerili
ENSCSAVG00000004697	-	98	56.780	ENSSLDG00000013201	mtif2	66	45.906	Seriola_lalandi_dorsalis
ENSCSAVG00000004697	-	98	50.000	ENSSARG00000004548	MTIF2	59	45.392	Sorex_araneus
ENSCSAVG00000004697	-	98	55.085	ENSSPUG00000012071	MTIF2	69	40.185	Sphenodon_punctatus
ENSCSAVG00000004697	-	98	54.237	ENSSPAG00000003141	mtif2	63	45.721	Stegastes_partitus
ENSCSAVG00000004697	-	98	49.153	ENSSSCG00000008404	MTIF2	61	46.380	Sus_scrofa
ENSCSAVG00000004697	-	98	54.237	ENSTGUG00000007064	MTIF2	59	46.296	Taeniopygia_guttata
ENSCSAVG00000004697	-	98	52.542	ENSTRUG00000012596	mtif2	64	44.820	Takifugu_rubripes
ENSCSAVG00000004697	-	98	52.542	ENSTNIG00000006453	mtif2	67	44.444	Tetraodon_nigroviridis
ENSCSAVG00000004697	-	98	52.542	ENSTBEG00000004711	MTIF2	59	40.783	Tupaia_belangeri
ENSCSAVG00000004697	-	98	50.847	ENSTTRG00000013952	MTIF2	55	41.379	Tursiops_truncatus
ENSCSAVG00000004697	-	98	52.542	ENSUAMG00000019639	MTIF2	60	46.575	Ursus_americanus
ENSCSAVG00000004697	-	98	52.542	ENSUMAG00000016809	MTIF2	60	46.575	Ursus_maritimus
ENSCSAVG00000004697	-	98	50.847	ENSVPAG00000007092	MTIF2	59	45.833	Vicugna_pacos
ENSCSAVG00000004697	-	98	52.542	ENSVVUG00000009923	MTIF2	59	48.157	Vulpes_vulpes
ENSCSAVG00000004697	-	98	52.542	ENSXETG00000032249	MTIF2	59	45.622	Xenopus_tropicalis
ENSCSAVG00000004697	-	98	55.932	ENSXCOG00000010285	mtif2	73	44.878	Xiphophorus_couchianus
ENSCSAVG00000004697	-	98	55.932	ENSXMAG00000004447	mtif2	63	46.544	Xiphophorus_maculatus