EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000004708 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
788 bases
Position
chrreftig_117:140523-141310
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000007885LSMPF01423.225.8e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000007990-788-ENSCSAVP00000007885129 (aa)-H2YRC5
Gene Model
Click here to download ENSCSAVG00000004708's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004708's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000004708-5533.333ENSCSAVG00000008596-8132.673
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000004708-8079.439ENSG00000100028SNRPD39883.607Homo_sapiens
ENSCSAVG00000004708-8079.439ENSAPOG00000007512snrpd3l8479.439Acanthochromis_polyacanthus
ENSCSAVG00000004708-8079.439ENSAMEG00000013935SNRPD38579.439Ailuropoda_melanoleuca
ENSCSAVG00000004708-8079.439ENSACIG00000008871snrpd3l8479.439Amphilophus_citrinellus
ENSCSAVG00000004708-8079.439ENSAOCG00000016743snrpd3l8479.439Amphiprion_ocellaris
ENSCSAVG00000004708-8079.439ENSAOCG00000022442-8479.439Amphiprion_ocellaris
ENSCSAVG00000004708-7979.245ENSAOCG00000016759-9879.245Amphiprion_ocellaris
ENSCSAVG00000004708-8079.439ENSAOCG00000008497SNRPD38479.439Amphiprion_ocellaris
ENSCSAVG00000004708-8079.439ENSAPEG00000006273snrpd3l8479.439Amphiprion_percula
ENSCSAVG00000004708-7979.245ENSAPEG00000006260-9879.245Amphiprion_percula
ENSCSAVG00000004708-8079.439ENSATEG00000020556snrpd3l7679.439Anabas_testudineus
ENSCSAVG00000004708-8079.439ENSAPLG00000008670SNRPD38579.439Anas_platyrhynchos
ENSCSAVG00000004708-8079.439ENSANAG00000026106SNRPD38979.245Aotus_nancymaae
ENSCSAVG00000004708-8079.439ENSACLG00000021295snrpd3l8479.439Astatotilapia_calliptera
ENSCSAVG00000004708-8077.570ENSAMXG00000038984snrpd3l8478.505Astyanax_mexicanus
ENSCSAVG00000004708-8079.439ENSBTAG00000021262SNRPD38579.439Bos_taurus
ENSCSAVG00000004708-9359.542WBGene00004914snr-16769.231Caenorhabditis_elegans
ENSCSAVG00000004708-8079.439ENSCJAG00000009630SNRPD38979.245Callithrix_jacchus
ENSCSAVG00000004708-8078.505ENSCAFG00000017258-8578.505Canis_familiaris
ENSCSAVG00000004708-8079.439ENSCAFG00000013864-8579.439Canis_familiaris
ENSCSAVG00000004708-8079.439ENSCAFG00020007165-8579.439Canis_lupus_dingo
ENSCSAVG00000004708-8079.439ENSCHIG00000000057SNRPD38579.439Capra_hircus
ENSCSAVG00000004708-8079.439ENSTSYG00000007649SNRPD38579.439Carlito_syrichta
ENSCSAVG00000004708-8079.439ENSCAPG00000016432-8579.439Cavia_aperea
ENSCSAVG00000004708-8079.439ENSCPOG00000033102-8579.439Cavia_porcellus
ENSCSAVG00000004708-8079.439ENSCCAG00000035006SNRPD38579.439Cebus_capucinus
ENSCSAVG00000004708-8079.439ENSCATG00000038878SNRPD38579.439Cercocebus_atys
ENSCSAVG00000004708-8079.439ENSCLAG00000011403SNRPD38579.439Chinchilla_lanigera
ENSCSAVG00000004708-8079.439ENSCSAG00000010694SNRPD38579.439Chlorocebus_sabaeus
ENSCSAVG00000004708-8079.439ENSCPBG00000002065SNRPD38579.439Chrysemys_picta_bellii
ENSCSAVG00000004708-8079.439ENSCANG00000032106SNRPD38579.439Colobus_angolensis_palliatus
ENSCSAVG00000004708-8079.439ENSCGRG00001021990Snrpd38579.439Cricetulus_griseus_chok1gshd
ENSCSAVG00000004708-8079.439ENSCGRG00000004280Snrpd38579.439Cricetulus_griseus_crigri
ENSCSAVG00000004708-8079.439ENSCVAG00000001276snrpd3l8479.439Cyprinodon_variegatus
ENSCSAVG00000004708-8077.570ENSDARG00000013800snrpd38478.505Danio_rerio
ENSCSAVG00000004708-8077.570ENSDARG00000076283snrpd3l8478.505Danio_rerio
ENSCSAVG00000004708-9157.025ENSDNOG00000042638-8462.136Dasypus_novemcinctus
ENSCSAVG00000004708-8079.439ENSDNOG00000047424-8579.439Dasypus_novemcinctus
ENSCSAVG00000004708-8468.966ENSDNOG00000018004-8570.000Dasypus_novemcinctus
ENSCSAVG00000004708-8059.223ENSDORG00000027169-8259.223Dipodomys_ordii
ENSCSAVG00000004708-6769.231ENSDORG00000002800-8370.330Dipodomys_ordii
ENSCSAVG00000004708-8466.372ENSDORG00000027706-8567.290Dipodomys_ordii
ENSCSAVG00000004708-7979.245FBgn0023167SmD37178.505Drosophila_melanogaster
ENSCSAVG00000004708-8079.439ENSEASG00005000273SNRPD38579.439Equus_asinus_asinus
ENSCSAVG00000004708-8079.439ENSECAG00000023316SNRPD38579.439Equus_caballus
ENSCSAVG00000004708-8079.439ENSEEUG00000015518SNRPD38679.439Erinaceus_europaeus
ENSCSAVG00000004708-8079.439ENSELUG00000010092snrpd3l8479.439Esox_lucius
ENSCSAVG00000004708-8077.570ENSELUG00000001854snrpd38478.505Esox_lucius
ENSCSAVG00000004708-8079.439ENSFCAG00000001512SNRPD38879.245Felis_catus
ENSCSAVG00000004708-8079.439ENSFALG00000007303SNRPD38579.439Ficedula_albicollis
ENSCSAVG00000004708-8079.439ENSFDAG00000010772SNRPD38579.439Fukomys_damarensis
ENSCSAVG00000004708-8079.439ENSFHEG00000010754snrpd3l8479.439Fundulus_heteroclitus
ENSCSAVG00000004708-8078.704ENSGMOG00000008469snrpd3l8478.704Gadus_morhua
ENSCSAVG00000004708-8079.439ENSGALG00000006596SNRPD38579.439Gallus_gallus
ENSCSAVG00000004708-7979.245ENSGAFG00000006661snrpd3l8279.245Gambusia_affinis
ENSCSAVG00000004708-8078.704ENSGACG00000017533snrpd3l8478.704Gasterosteus_aculeatus
ENSCSAVG00000004708-8079.439ENSGAGG00000023325SNRPD38579.439Gopherus_agassizii
ENSCSAVG00000004708-8079.439ENSGGOG00000015640SNRPD38579.439Gorilla_gorilla
ENSCSAVG00000004708-8079.439ENSHBUG00000001332snrpd3l8479.439Haplochromis_burtoni
ENSCSAVG00000004708-8079.439ENSHGLG00000016496SNRPD38579.439Heterocephalus_glaber_female
ENSCSAVG00000004708-8076.636ENSHGLG00000009844-8576.636Heterocephalus_glaber_female
ENSCSAVG00000004708-8076.636ENSHGLG00100011326-8576.636Heterocephalus_glaber_male
ENSCSAVG00000004708-8079.439ENSHGLG00100019304SNRPD38579.439Heterocephalus_glaber_male
ENSCSAVG00000004708-8079.439ENSHCOG00000014396snrpd3l8479.439Hippocampus_comes
ENSCSAVG00000004708-8078.505ENSIPUG00000003083snrpd38479.439Ictalurus_punctatus
ENSCSAVG00000004708-8079.439ENSSTOG00000025674SNRPD38579.439Ictidomys_tridecemlineatus
ENSCSAVG00000004708-8079.439ENSJJAG00000013303Snrpd38579.439Jaculus_jaculus
ENSCSAVG00000004708-8079.439ENSKMAG00000012493snrpd3l8479.439Kryptolebias_marmoratus
ENSCSAVG00000004708-8079.439ENSLBEG00000003202snrpd3l8479.439Labrus_bergylta
ENSCSAVG00000004708-8078.505ENSLACG00000015192SNRPD38578.505Latimeria_chalumnae
ENSCSAVG00000004708-8079.439ENSLOCG00000006978snrpd38979.245Lepisosteus_oculatus
ENSCSAVG00000004708-8079.439ENSLAFG00000028180SNRPD38579.439Loxodonta_africana
ENSCSAVG00000004708-8079.439ENSMFAG00000033628SNRPD38579.439Macaca_fascicularis
ENSCSAVG00000004708-8079.439ENSMMUG00000000264SNRPD38579.439Macaca_mulatta
ENSCSAVG00000004708-8079.439ENSMNEG00000020857SNRPD38579.439Macaca_nemestrina
ENSCSAVG00000004708-8079.439ENSMLEG00000037548SNRPD38879.245Mandrillus_leucophaeus
ENSCSAVG00000004708-8079.439ENSMZEG00005017664snrpd3l8479.439Maylandia_zebra
ENSCSAVG00000004708-8079.439ENSMAUG00000021393Snrpd38579.439Mesocricetus_auratus
ENSCSAVG00000004708-8079.439ENSMICG00000034782SNRPD38579.439Microcebus_murinus
ENSCSAVG00000004708-8079.439ENSMOCG00000009361Snrpd38579.439Microtus_ochrogaster
ENSCSAVG00000004708-8476.786ENSMMOG00000020985snrpd3l6779.245Mola_mola
ENSCSAVG00000004708-8079.439ENSMODG00000004024SNRPD38579.439Monodelphis_domestica
ENSCSAVG00000004708-8079.439ENSMALG00000013334snrpd3l8479.439Monopterus_albus
ENSCSAVG00000004708-8079.439MGP_CAROLIEiJ_G0015441Snrpd38579.439Mus_caroli
ENSCSAVG00000004708-8079.439ENSMUSG00000020180Snrpd38579.439Mus_musculus
ENSCSAVG00000004708-8079.439MGP_PahariEiJ_G0030857Snrpd38579.439Mus_pahari
ENSCSAVG00000004708-8079.439MGP_SPRETEiJ_G0016254Snrpd38579.439Mus_spretus
ENSCSAVG00000004708-8079.439ENSMPUG00000002889SNRPD38579.439Mustela_putorius_furo
ENSCSAVG00000004708-8079.439ENSMLUG00000009838SNRPD38579.439Myotis_lucifugus
ENSCSAVG00000004708-8079.439ENSNGAG00000010328Snrpd38579.439Nannospalax_galili
ENSCSAVG00000004708-8079.439ENSNBRG00000020307snrpd3l8479.439Neolamprologus_brichardi
ENSCSAVG00000004708-8079.439ENSNLEG00000035757SNRPD38579.439Nomascus_leucogenys
ENSCSAVG00000004708-8079.439ENSMEUG00000003772SNRPD38579.439Notamacropus_eugenii
ENSCSAVG00000004708-8079.439ENSOPRG00000005763SNRPD38579.439Ochotona_princeps
ENSCSAVG00000004708-8078.505ENSODEG00000019354-8578.505Octodon_degus
ENSCSAVG00000004708-8077.358ENSODEG00000020162-8577.358Octodon_degus
ENSCSAVG00000004708-8079.439ENSODEG00000008064-8579.439Octodon_degus
ENSCSAVG00000004708-8079.439ENSONIG00000003828snrpd3l8479.439Oreochromis_niloticus
ENSCSAVG00000004708-8079.439ENSOANG00000002463SNRPD38579.439Ornithorhynchus_anatinus
ENSCSAVG00000004708-8079.439ENSOCUG00000004845SNRPD38579.439Oryctolagus_cuniculus
ENSCSAVG00000004708-8079.439ENSORLG00000010586snrpd3l8479.439Oryzias_latipes
ENSCSAVG00000004708-8079.439ENSORLG00020011769snrpd3l8479.439Oryzias_latipes_hni
ENSCSAVG00000004708-8079.439ENSORLG00015022940snrpd3l8479.439Oryzias_latipes_hsok
ENSCSAVG00000004708-8476.786ENSOMEG00000022734snrpd3l8479.439Oryzias_melastigma
ENSCSAVG00000004708-8079.439ENSOGAG00000012708SNRPD38579.439Otolemur_garnettii
ENSCSAVG00000004708-8079.439ENSOARG00000013984SNRPD38579.439Ovis_aries
ENSCSAVG00000004708-8079.439ENSPPAG00000039191SNRPD38579.439Pan_paniscus
ENSCSAVG00000004708-8079.439ENSPPRG00000001470SNRPD38579.439Panthera_pardus
ENSCSAVG00000004708-8079.439ENSPTIG00000016610SNRPD38579.439Panthera_tigris_altaica
ENSCSAVG00000004708-8079.439ENSPTRG00000014176SNRPD38579.439Pan_troglodytes
ENSCSAVG00000004708-8079.439ENSPANG00000009279SNRPD38879.245Papio_anubis
ENSCSAVG00000004708-8078.505ENSPKIG00000006412snrpd3l8478.505Paramormyrops_kingsleyae
ENSCSAVG00000004708-8077.570ENSPSIG00000010022-8577.570Pelodiscus_sinensis
ENSCSAVG00000004708-7979.245ENSPMGG00000004486snrpd3l8679.245Periophthalmus_magnuspinnatus
ENSCSAVG00000004708-8079.439ENSPCIG00000010910SNRPD37179.439Phascolarctos_cinereus
ENSCSAVG00000004708-8079.439ENSPFOG00000019673snrpd3l8479.439Poecilia_formosa
ENSCSAVG00000004708-8079.439ENSPLAG00000023249snrpd3l8479.439Poecilia_latipinna
ENSCSAVG00000004708-8079.439ENSPMEG00000008482snrpd3l8479.439Poecilia_mexicana
ENSCSAVG00000004708-7979.245ENSPREG00000007532snrpd3l8779.245Poecilia_reticulata
ENSCSAVG00000004708-8079.439ENSPPYG00000011648SNRPD38579.439Pongo_abelii
ENSCSAVG00000004708-8079.439ENSPCAG00000002065SNRPD38579.439Procavia_capensis
ENSCSAVG00000004708-8079.439ENSPCOG00000011842SNRPD38579.439Propithecus_coquereli
ENSCSAVG00000004708-8078.505ENSPVAG00000011405SNRPD38578.505Pteropus_vampyrus
ENSCSAVG00000004708-8079.439ENSPNYG00000013344snrpd3l8479.439Pundamilia_nyererei
ENSCSAVG00000004708-8076.636ENSPNAG00000008683snrpd3l8477.570Pygocentrus_nattereri
ENSCSAVG00000004708-8078.505ENSPNAG00000010547snrpd38478.505Pygocentrus_nattereri
ENSCSAVG00000004708-8079.439ENSRNOG00000050410Snrpd38579.439Rattus_norvegicus
ENSCSAVG00000004708-8079.439ENSRBIG00000029017SNRPD38579.439Rhinopithecus_bieti
ENSCSAVG00000004708-8079.439ENSRROG00000031152SNRPD38579.439Rhinopithecus_roxellana
ENSCSAVG00000004708-6350.617YLR147CSMD38050.617Saccharomyces_cerevisiae
ENSCSAVG00000004708-8077.570ENSSFOG00015014180snrpd3l8477.570Scleropages_formosus
ENSCSAVG00000004708-8078.505ENSSFOG00015007002snrpd3l8479.439Scleropages_formosus
ENSCSAVG00000004708-8079.439ENSSMAG00000019307snrpd3l8479.439Scophthalmus_maximus
ENSCSAVG00000004708-8079.439ENSSDUG00000006870snrpd3l8479.439Seriola_dumerili
ENSCSAVG00000004708-8079.439ENSSLDG00000022664snrpd3l8479.439Seriola_lalandi_dorsalis
ENSCSAVG00000004708-8079.439ENSSARG00000002357SNRPD38579.439Sorex_araneus
ENSCSAVG00000004708-8079.439ENSSPUG00000014285SNRPD38579.439Sphenodon_punctatus
ENSCSAVG00000004708-8079.439ENSSSCG00000010058SNRPD38579.439Sus_scrofa
ENSCSAVG00000004708-8079.439ENSTGUG00000010079SNRPD38579.439Taeniopygia_guttata
ENSCSAVG00000004708-7979.245ENSTRUG00000023976snrpd3l9079.245Takifugu_rubripes
ENSCSAVG00000004708-8079.439ENSTNIG00000005323snrpd3l8479.439Tetraodon_nigroviridis
ENSCSAVG00000004708-8079.439ENSTBEG00000014334SNRPD38579.439Tupaia_belangeri
ENSCSAVG00000004708-8079.439ENSTTRG00000006022SNRPD38579.439Tursiops_truncatus
ENSCSAVG00000004708-8079.439ENSUAMG00000010767SNRPD38579.439Ursus_americanus
ENSCSAVG00000004708-8079.439ENSUMAG00000001670SNRPD38579.439Ursus_maritimus
ENSCSAVG00000004708-8079.439ENSVPAG00000000241SNRPD38579.439Vicugna_pacos
ENSCSAVG00000004708-7979.245ENSVVUG00000019340SNRPD35379.245Vulpes_vulpes
ENSCSAVG00000004708-6780.460ENSXETG00000024918snrpd36880.460Xenopus_tropicalis
ENSCSAVG00000004708-8079.439ENSXCOG00000004795snrpd3l8479.439Xiphophorus_couchianus
ENSCSAVG00000004708-8079.439ENSXMAG00000001133snrpd3l8479.439Xiphophorus_maculatus

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