EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000004765 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
1413 bases
Position
chrreftig_194:47392-48804
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000007991RRM_1PF00076.223.9e-4312
ENSCSAVP00000007991RRM_1PF00076.223.9e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000008097-1359-ENSCSAVP00000007991452 (aa)-H2YRN1
Gene Model
Click here to download ENSCSAVG00000004765's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004765's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000004765-8831.068ENSCSAVG00000006572-6831.068
ENSCSAVG00000004765-9746.050ENSCSAVG00000001385-10045.994
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000004765-9750.412ENSG00000179950PUF609750.205Homo_sapiens
ENSCSAVG00000004765-9750.725ENSAPOG00000001713puf60b9549.284Acanthochromis_polyacanthus
ENSCSAVG00000004765-9749.799ENSAMEG00000006406PUF609050.200Ailuropoda_melanoleuca
ENSCSAVG00000004765-9748.200ENSACIG00000021705puf60b9748.600Amphilophus_citrinellus
ENSCSAVG00000004765-9744.533ENSACIG00000003263-7662.698Amphilophus_citrinellus
ENSCSAVG00000004765-9748.400ENSAOCG00000015558-9548.297Amphiprion_ocellaris
ENSCSAVG00000004765-9750.725ENSAOCG00000005395puf60b9748.221Amphiprion_ocellaris
ENSCSAVG00000004765-9748.033ENSAPEG00000011923puf60b9547.119Amphiprion_percula
ENSCSAVG00000004765-9746.541ENSAPEG00000001836-6960.606Amphiprion_percula
ENSCSAVG00000004765-9748.785ENSATEG00000006303-9547.000Anabas_testudineus
ENSCSAVG00000004765-9748.600ENSATEG00000001730puf60b9548.000Anabas_testudineus
ENSCSAVG00000004765-9749.603ENSAPLG00000010150PUF609649.206Anas_platyrhynchos
ENSCSAVG00000004765-9749.315ENSACAG00000001645PUF609449.023Anolis_carolinensis
ENSCSAVG00000004765-9750.617ENSANAG00000018626PUF609749.802Aotus_nancymaae
ENSCSAVG00000004765-9749.275ENSACLG00000004462puf60b9749.689Astatotilapia_calliptera
ENSCSAVG00000004765-9750.924ENSAMXG00000036570puf60a9450.713Astyanax_mexicanus
ENSCSAVG00000004765-5161.207ENSAMXG00000041030puf60b9746.201Astyanax_mexicanus
ENSCSAVG00000004765-9750.412ENSBTAG00000037493PUF609649.703Bos_taurus
ENSCSAVG00000004765-7948.739WBGene00004389rnp-67048.739Caenorhabditis_elegans
ENSCSAVG00000004765-9750.412ENSCJAG00000021485PUF609549.605Callithrix_jacchus
ENSCSAVG00000004765-9750.412ENSCAFG00000001400PUF608950.820Canis_familiaris
ENSCSAVG00000004765-9750.412ENSCAFG00020018754PUF609549.605Canis_lupus_dingo
ENSCSAVG00000004765-9749.304ENSCHIG00000001618PUF608449.703Capra_hircus
ENSCSAVG00000004765-9749.497ENSTSYG00000011912PUF609749.605Carlito_syrichta
ENSCSAVG00000004765-9745.714ENSCPOG00000014613PUF609046.138Cavia_porcellus
ENSCSAVG00000004765-9750.617ENSCCAG00000007744PUF609550.200Cebus_capucinus
ENSCSAVG00000004765-9750.412ENSCATG00000035405PUF609549.109Cercocebus_atys
ENSCSAVG00000004765-9750.412ENSCLAG00000009154PUF608950.820Chinchilla_lanigera
ENSCSAVG00000004765-9749.304ENSCSAG00000008878PUF609749.109Chlorocebus_sabaeus
ENSCSAVG00000004765-9749.206ENSCPBG00000005595PUF609549.407Chrysemys_picta_bellii
ENSCSAVG00000004765-10077.226ENSCING00000008436-9777.847Ciona_intestinalis
ENSCSAVG00000004765-5156.466ENSCING00000002156-6456.466Ciona_intestinalis
ENSCSAVG00000004765-7547.287ENSCANG00000041843PUF609745.926Colobus_angolensis_palliatus
ENSCSAVG00000004765-9750.412ENSCGRG00001017442Puf608950.820Cricetulus_griseus_chok1gshd
ENSCSAVG00000004765-9749.304ENSCGRG00000003717Puf608949.703Cricetulus_griseus_crigri
ENSCSAVG00000004765-9746.555ENSCSEG00000014845-8748.643Cynoglossus_semilaevis
ENSCSAVG00000004765-9747.826ENSCSEG00000019887puf60b8948.200Cynoglossus_semilaevis
ENSCSAVG00000004765-9748.660ENSCVAG00000009386puf60b9749.689Cyprinodon_variegatus
ENSCSAVG00000004765-8950.340ENSCVAG00000001560-9350.113Cyprinodon_variegatus
ENSCSAVG00000004765-9744.919ENSDARG00000001241puf60b9359.483Danio_rerio
ENSCSAVG00000004765-9749.119ENSDARG00000032175puf60a9455.856Danio_rerio
ENSCSAVG00000004765-8844.719ENSDNOG00000043278PUF607845.190Dasypus_novemcinctus
ENSCSAVG00000004765-9750.412ENSDORG00000004585Puf609150.820Dipodomys_ordii
ENSCSAVG00000004765-8057.872FBgn0028577hfp6459.447Drosophila_melanogaster
ENSCSAVG00000004765-9750.520ENSEBUG00000005470-8850.210Eptatretus_burgeri
ENSCSAVG00000004765-9257.959ENSEBUG00000014291puf60b5959.843Eptatretus_burgeri
ENSCSAVG00000004765-9750.412ENSEASG00005009695PUF609549.605Equus_asinus_asinus
ENSCSAVG00000004765-9750.412ENSECAG00000024681PUF609449.605Equus_caballus
ENSCSAVG00000004765-9750.000ENSELUG00000018443-9750.719Esox_lucius
ENSCSAVG00000004765-9660.776ENSELUG00000006507puf60b9560.776Esox_lucius
ENSCSAVG00000004765-9750.412ENSFCAG00000001045PUF609749.605Felis_catus
ENSCSAVG00000004765-9743.849ENSFALG00000001136PUF609543.539Ficedula_albicollis
ENSCSAVG00000004765-9750.412ENSFDAG00000017177PUF608950.820Fukomys_damarensis
ENSCSAVG00000004765-9647.992ENSFHEG00000021687PUF609948.049Fundulus_heteroclitus
ENSCSAVG00000004765-9748.571ENSFHEG00000020046puf60b9749.482Fundulus_heteroclitus
ENSCSAVG00000004765-9740.900ENSGMOG00000006392puf60b9640.606Gadus_morhua
ENSCSAVG00000004765-5158.635ENSGALG00000039901PUF606858.635Gallus_gallus
ENSCSAVG00000004765-9747.600ENSGAFG00000021040puf60b9748.400Gambusia_affinis
ENSCSAVG00000004765-9850.104ENSGAFG00000004334-9947.890Gambusia_affinis
ENSCSAVG00000004765-9740.117ENSGACG00000004717puf60b7753.459Gasterosteus_aculeatus
ENSCSAVG00000004765-9747.658ENSGACG00000001484-9746.709Gasterosteus_aculeatus
ENSCSAVG00000004765-9750.308ENSGAGG00000013289PUF608850.615Gopherus_agassizii
ENSCSAVG00000004765-9750.412ENSGGOG00000004646PUF609549.109Gorilla_gorilla
ENSCSAVG00000004765-9749.275ENSHBUG00000015118puf60b9749.689Haplochromis_burtoni
ENSCSAVG00000004765-9750.308ENSHBUG00000009634-9745.639Haplochromis_burtoni
ENSCSAVG00000004765-9750.412ENSHGLG00000006111PUF608950.820Heterocephalus_glaber_female
ENSCSAVG00000004765-9750.412ENSHGLG00100012362PUF608950.820Heterocephalus_glaber_male
ENSCSAVG00000004765-9746.154ENSHCOG00000000378-9446.072Hippocampus_comes
ENSCSAVG00000004765-9747.410ENSHCOG00000015541puf60b7759.483Hippocampus_comes
ENSCSAVG00000004765-9751.875ENSIPUG00000002453puf60a9748.907Ictalurus_punctatus
ENSCSAVG00000004765-9746.154ENSIPUG00000004660puf60b9745.714Ictalurus_punctatus
ENSCSAVG00000004765-9749.304ENSSTOG00000025037PUF609049.703Ictidomys_tridecemlineatus
ENSCSAVG00000004765-9750.412ENSJJAG00000001076Puf608950.820Jaculus_jaculus
ENSCSAVG00000004765-9748.790ENSKMAG00000010106-9648.790Kryptolebias_marmoratus
ENSCSAVG00000004765-9747.929ENSKMAG00000016745puf60b9748.400Kryptolebias_marmoratus
ENSCSAVG00000004765-9762.162ENSLBEG00000012505puf60b9762.162Labrus_bergylta
ENSCSAVG00000004765-7046.027ENSLACG00000005456PUF607365.789Latimeria_chalumnae
ENSCSAVG00000004765-9749.400ENSLOCG00000010106puf60b9549.400Lepisosteus_oculatus
ENSCSAVG00000004765-9748.907ENSLAFG00000022929PUF609049.307Loxodonta_africana
ENSCSAVG00000004765-9750.412ENSMFAG00000043373PUF609549.109Macaca_fascicularis
ENSCSAVG00000004765-9750.412ENSMMUG00000013558PUF609549.109Macaca_mulatta
ENSCSAVG00000004765-9750.412ENSMNEG00000031099PUF609549.109Macaca_nemestrina
ENSCSAVG00000004765-9750.412ENSMLEG00000040009PUF609750.205Mandrillus_leucophaeus
ENSCSAVG00000004765-9748.111ENSMAMG00000010394puf60b9047.316Mastacembelus_armatus
ENSCSAVG00000004765-9748.485ENSMAMG00000019476-9545.565Mastacembelus_armatus
ENSCSAVG00000004765-9749.105ENSMZEG00005019425-9545.294Maylandia_zebra
ENSCSAVG00000004765-9749.275ENSMZEG00005018515puf60b9749.689Maylandia_zebra
ENSCSAVG00000004765-9749.603ENSMGAG00000013070PUF609549.206Meleagris_gallopavo
ENSCSAVG00000004765-5162.069ENSMAUG00000014267-5962.069Mesocricetus_auratus
ENSCSAVG00000004765-9542.227ENSMAUG00000018549-9542.138Mesocricetus_auratus
ENSCSAVG00000004765-9749.485ENSMICG00000012226PUF609649.605Microcebus_murinus
ENSCSAVG00000004765-9750.412ENSMOCG00000018780Puf608950.820Microtus_ochrogaster
ENSCSAVG00000004765-9748.298ENSMMOG00000018059-9947.837Mola_mola
ENSCSAVG00000004765-9748.600ENSMMOG00000004217puf60b9747.628Mola_mola
ENSCSAVG00000004765-9750.412ENSMODG00000009161PUF609050.820Monodelphis_domestica
ENSCSAVG00000004765-9749.299ENSMALG00000000200-7958.468Monopterus_albus
ENSCSAVG00000004765-9748.832ENSMALG00000006797puf60b9548.408Monopterus_albus
ENSCSAVG00000004765-9750.617MGP_CAROLIEiJ_G0019910Puf608951.025Mus_caroli
ENSCSAVG00000004765-9750.617ENSMUSG00000002524Puf608951.025Mus_musculus
ENSCSAVG00000004765-9750.617MGP_PahariEiJ_G0019920Puf608951.025Mus_pahari
ENSCSAVG00000004765-9750.617MGP_SPRETEiJ_G0020812Puf608951.025Mus_spretus
ENSCSAVG00000004765-9749.304ENSMPUG00000008137PUF608949.703Mustela_putorius_furo
ENSCSAVG00000004765-9749.281ENSMLUG00000013032-9549.693Myotis_lucifugus
ENSCSAVG00000004765-9748.509ENSMLUG00000000238-9048.911Myotis_lucifugus
ENSCSAVG00000004765-9750.412ENSNGAG00000000712Puf609749.605Nannospalax_galili
ENSCSAVG00000004765-7844.471ENSNBRG00000013047puf60b9345.137Neolamprologus_brichardi
ENSCSAVG00000004765-9747.600ENSNBRG00000017223-9548.491Neolamprologus_brichardi
ENSCSAVG00000004765-9750.412ENSNLEG00000002156PUF609550.205Nomascus_leucogenys
ENSCSAVG00000004765-7259.036ENSOPRG00000002147PUF606659.036Ochotona_princeps
ENSCSAVG00000004765-5162.069ENSODEG00000014024-5862.069Octodon_degus
ENSCSAVG00000004765-9737.815ENSODEG00000015513-9438.866Octodon_degus
ENSCSAVG00000004765-9748.200ENSONIG00000006247puf60b9548.600Oreochromis_niloticus
ENSCSAVG00000004765-9749.105ENSONIG00000014030-9545.490Oreochromis_niloticus
ENSCSAVG00000004765-9447.948ENSOANG00000006962PUF609447.335Ornithorhynchus_anatinus
ENSCSAVG00000004765-9748.671ENSORLG00000012279puf60b9748.200Oryzias_latipes
ENSCSAVG00000004765-9748.297ENSORLG00000028655-9747.495Oryzias_latipes
ENSCSAVG00000004765-9747.628ENSORLG00020007333puf609748.200Oryzias_latipes_hni
ENSCSAVG00000004765-9747.390ENSORLG00020018144-9447.879Oryzias_latipes_hni
ENSCSAVG00000004765-9748.008ENSORLG00015007718puf60b9748.008Oryzias_latipes_hsok
ENSCSAVG00000004765-9747.390ENSORLG00015016833-9447.879Oryzias_latipes_hsok
ENSCSAVG00000004765-9747.708ENSOMEG00000001643puf60b9946.201Oryzias_melastigma
ENSCSAVG00000004765-9749.896ENSOMEG00000022185-9447.571Oryzias_melastigma
ENSCSAVG00000004765-9749.304ENSOGAG00000006259PUF609049.703Otolemur_garnettii
ENSCSAVG00000004765-9750.303ENSOARG00000016235PUF609550.704Ovis_aries
ENSCSAVG00000004765-9750.412ENSPPAG00000029933PUF609549.109Pan_paniscus
ENSCSAVG00000004765-9750.308ENSPPRG00000003257PUF609750.716Panthera_pardus
ENSCSAVG00000004765-9750.412ENSPTIG00000009795PUF609550.000Panthera_tigris_altaica
ENSCSAVG00000004765-9750.206ENSPTRG00000020670PUF609548.911Pan_troglodytes
ENSCSAVG00000004765-9750.206ENSPTRG00000043963-9548.911Pan_troglodytes
ENSCSAVG00000004765-9750.412ENSPANG00000021936PUF609549.109Papio_anubis
ENSCSAVG00000004765-9750.101ENSPKIG00000004295puf60a7262.992Paramormyrops_kingsleyae
ENSCSAVG00000004765-9749.795ENSPKIG00000012204puf60b7360.630Paramormyrops_kingsleyae
ENSCSAVG00000004765-9749.304ENSPSIG00000004679PUF609549.407Pelodiscus_sinensis
ENSCSAVG00000004765-9747.151ENSPMGG00000013444puf60b9746.918Periophthalmus_magnuspinnatus
ENSCSAVG00000004765-9750.412ENSPEMG00000008820Puf608950.820Peromyscus_maniculatus_bairdii
ENSCSAVG00000004765-9750.412ENSPCIG00000020270PUF609649.605Phascolarctos_cinereus
ENSCSAVG00000004765-9849.703ENSPFOG00000011118-9549.600Poecilia_formosa
ENSCSAVG00000004765-9748.571ENSPFOG00000019217puf60b9549.482Poecilia_formosa
ENSCSAVG00000004765-9748.571ENSPLAG00000010754puf60b9749.482Poecilia_latipinna
ENSCSAVG00000004765-9849.901ENSPLAG00000017025-8849.400Poecilia_latipinna
ENSCSAVG00000004765-9748.571ENSPMEG00000000838puf60b9749.482Poecilia_mexicana
ENSCSAVG00000004765-9849.505ENSPMEG00000009767-8849.400Poecilia_mexicana
ENSCSAVG00000004765-9746.939ENSPREG00000005440puf60b9747.826Poecilia_reticulata
ENSCSAVG00000004765-7644.828ENSPPYG00000018951-9344.717Pongo_abelii
ENSCSAVG00000004765-7546.040ENSPCAG00000014837PUF609746.552Procavia_capensis
ENSCSAVG00000004765-9750.412ENSPCOG00000027981PUF609649.605Propithecus_coquereli
ENSCSAVG00000004765-7361.538ENSPVAG00000016167PUF605955.280Pteropus_vampyrus
ENSCSAVG00000004765-9749.105ENSPNYG00000004273-9545.294Pundamilia_nyererei
ENSCSAVG00000004765-9748.200ENSPNYG00000002556puf60b9748.600Pundamilia_nyererei
ENSCSAVG00000004765-9748.734ENSPNAG00000019415puf60b8748.093Pygocentrus_nattereri
ENSCSAVG00000004765-9751.129ENSPNAG00000019909puf60a9650.816Pygocentrus_nattereri
ENSCSAVG00000004765-9750.617ENSRNOG00000009960Puf608951.025Rattus_norvegicus
ENSCSAVG00000004765-9750.412ENSRBIG00000035274PUF609549.109Rhinopithecus_bieti
ENSCSAVG00000004765-9750.412ENSRROG00000029360PUF609549.109Rhinopithecus_roxellana
ENSCSAVG00000004765-9751.148ENSSBOG00000027089PUF609550.301Saimiri_boliviensis_boliviensis
ENSCSAVG00000004765-8549.111ENSSHAG00000006668PUF608649.778Sarcophilus_harrisii
ENSCSAVG00000004765-9548.594ENSSFOG00015019371puf60a7959.072Scleropages_formosus
ENSCSAVG00000004765-9748.958ENSSFOG00015019619puf60b9948.017Scleropages_formosus
ENSCSAVG00000004765-7362.245ENSSMAG00000016381puf60b6762.245Scophthalmus_maximus
ENSCSAVG00000004765-9747.727ENSSDUG00000009935puf60b9945.842Seriola_dumerili
ENSCSAVG00000004765-9448.571ENSSDUG00000007048-9247.727Seriola_dumerili
ENSCSAVG00000004765-9748.024ENSSLDG00000024011puf60b9248.400Seriola_lalandi_dorsalis
ENSCSAVG00000004765-9748.902ENSSLDG00000007366-9746.185Seriola_lalandi_dorsalis
ENSCSAVG00000004765-5151.667ENSSPUG00000013518PUF606651.667Sphenodon_punctatus
ENSCSAVG00000004765-9748.400ENSSPAG00000020285-7361.905Stegastes_partitus
ENSCSAVG00000004765-9748.692ENSSPAG00000012144puf60b7857.028Stegastes_partitus
ENSCSAVG00000004765-9750.412ENSSSCG00000038800PUF609948.511Sus_scrofa
ENSCSAVG00000004765-9749.602ENSTGUG00000012797-9649.901Taeniopygia_guttata
ENSCSAVG00000004765-9750.526ENSTRUG00000008843-9749.364Takifugu_rubripes
ENSCSAVG00000004765-9747.515ENSTRUG00000005420puf60b8947.431Takifugu_rubripes
ENSCSAVG00000004765-9748.571ENSTNIG00000003069-9648.861Tetraodon_nigroviridis
ENSCSAVG00000004765-9747.628ENSTNIG00000013675puf60b9647.600Tetraodon_nigroviridis
ENSCSAVG00000004765-7943.529ENSTBEG00000001899-9843.544Tupaia_belangeri
ENSCSAVG00000004765-9749.203ENSTTRG00000017088PUF609749.505Tursiops_truncatus
ENSCSAVG00000004765-9750.412ENSUAMG00000024917PUF609549.605Ursus_americanus
ENSCSAVG00000004765-9746.800ENSUMAG00000000272PUF609047.211Ursus_maritimus
ENSCSAVG00000004765-9750.412ENSVVUG00000022527PUF609749.605Vulpes_vulpes
ENSCSAVG00000004765-9751.639ENSXETG00000012469puf609650.308Xenopus_tropicalis
ENSCSAVG00000004765-9748.571ENSXCOG00000012355puf60b9749.482Xiphophorus_couchianus
ENSCSAVG00000004765-9850.728ENSXMAG00000010507-9650.734Xiphophorus_maculatus
ENSCSAVG00000004765-9748.571ENSXMAG00000001862puf60b9748.400Xiphophorus_maculatus

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