EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004787 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1785 bases
Position: chrreftig_220:211071-212855
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008041	PARP	PF00644.20	5.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008148	-	977	-	ENSCSAVP00000008041	160 (aa)	-	H2YRT1

Gene Model

Click here to download ENSCSAVG00000004787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004787	-	92	49.682	ENSCSAVG00000006569	-	99	49.682
ENSCSAVG00000004787	-	91	48.366	ENSCSAVG00000006566	-	100	48.366
ENSCSAVG00000004787	-	91	43.038	ENSCSAVG00000007132	-	100	43.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004787	-	98	42.012	ENSCING00000015928	-	67	42.012	Ciona_intestinalis
ENSCSAVG00000004787	-	76	50.000	ENSCING00000023401	-	95	50.000	Ciona_intestinalis
ENSCSAVG00000004787	-	73	52.033	ENSLACG00000000311	-	98	52.033	Latimeria_chalumnae