EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004820 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 30577 bases
Position: chrreftig_51:1335948-1366524
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008103	KH_1	PF00013.29	1.9e-32	1	2
ENSCSAVP00000008103	KH_1	PF00013.29	1.9e-32	2	2
ENSCSAVP00000008101	KH_1	PF00013.29	2.1e-32	1	2
ENSCSAVP00000008101	KH_1	PF00013.29	2.1e-32	2	2
ENSCSAVP00000008102	KH_1	PF00013.29	2.3e-32	1	2
ENSCSAVP00000008102	KH_1	PF00013.29	2.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008211	-	2910	-	ENSCSAVP00000008103	852 (aa)	-	H2YRZ3
ENSCSAVT00000008210	-	3255	-	ENSCSAVP00000008102	881 (aa)	-	H2YRZ2
ENSCSAVT00000008212	-	773	-	ENSCSAVP00000008104	256 (aa)	-	H2YRZ4
ENSCSAVT00000008209	-	3111	-	ENSCSAVP00000008101	873 (aa)	-	H2YRZ1

Gene Model

Click here to download ENSCSAVG00000004820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004820	-	100	45.200	ENSG00000122870	BICC1	91	45.943	Homo_sapiens
ENSCSAVG00000004820	-	98	44.506	ENSAMEG00000013342	BICC1	95	44.235	Ailuropoda_melanoleuca
ENSCSAVG00000004820	-	100	43.057	ENSAOCG00000022325	bicc1a	91	42.595	Amphiprion_ocellaris
ENSCSAVG00000004820	-	100	43.103	ENSAPEG00000005966	bicc1a	91	42.703	Amphiprion_percula
ENSCSAVG00000004820	-	100	42.642	ENSATEG00000008634	bicc1a	91	43.384	Anabas_testudineus
ENSCSAVG00000004820	-	93	41.657	ENSAPLG00000015162	BICC1	95	41.810	Anas_platyrhynchos
ENSCSAVG00000004820	-	100	44.026	ENSACAG00000001892	BICC1	80	44.178	Anolis_carolinensis
ENSCSAVG00000004820	-	99	44.166	ENSANAG00000022803	BICC1	96	45.574	Aotus_nancymaae
ENSCSAVG00000004820	-	100	43.380	ENSACLG00000019426	bicc1a	91	42.888	Astatotilapia_calliptera
ENSCSAVG00000004820	-	70	52.109	ENSAMXG00000011396	bicc1a	66	50.691	Astyanax_mexicanus
ENSCSAVG00000004820	-	100	43.862	ENSAMXG00000030961	bicc1b	91	44.283	Astyanax_mexicanus
ENSCSAVG00000004820	-	100	45.614	ENSBTAG00000010694	BICC1	93	45.038	Bos_taurus
ENSCSAVG00000004820	-	100	45.277	ENSCJAG00000010639	BICC1	85	45.943	Callithrix_jacchus
ENSCSAVG00000004820	-	98	44.358	ENSCAFG00000012331	BICC1	98	44.889	Canis_familiaris
ENSCSAVG00000004820	-	100	44.951	ENSCAFG00020026888	BICC1	93	45.474	Canis_lupus_dingo
ENSCSAVG00000004820	-	100	45.165	ENSCHIG00000009725	BICC1	91	45.005	Capra_hircus
ENSCSAVG00000004820	-	100	44.060	ENSTSYG00000004527	BICC1	91	45.504	Carlito_syrichta
ENSCSAVG00000004820	-	67	61.157	ENSCAPG00000014361	BICC1	72	61.157	Cavia_aperea
ENSCSAVG00000004820	-	98	44.196	ENSCPOG00000015585	BICC1	98	44.064	Cavia_porcellus
ENSCSAVG00000004820	-	100	45.514	ENSCCAG00000028110	BICC1	91	45.574	Cebus_capucinus
ENSCSAVG00000004820	-	100	45.724	ENSCATG00000016603	BICC1	93	45.674	Cercocebus_atys
ENSCSAVG00000004820	-	98	42.441	ENSCLAG00000012171	BICC1	98	43.708	Chinchilla_lanigera
ENSCSAVG00000004820	-	99	44.505	ENSCSAG00000007305	BICC1	91	45.514	Chlorocebus_sabaeus
ENSCSAVG00000004820	-	88	65.625	ENSCHOG00000010828	BICC1	81	65.625	Choloepus_hoffmanni
ENSCSAVG00000004820	-	100	44.073	ENSCPBG00000005820	BICC1	95	43.575	Chrysemys_picta_bellii
ENSCSAVG00000004820	-	100	45.564	ENSCANG00000037900	BICC1	95	45.624	Colobus_angolensis_palliatus
ENSCSAVG00000004820	-	100	43.764	ENSCGRG00001019138	Bicc1	93	45.094	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004820	-	99	43.488	ENSCGRG00000005736	Bicc1	98	44.023	Cricetulus_griseus_crigri
ENSCSAVG00000004820	-	100	42.904	ENSCSEG00000005038	bicc1a	92	42.987	Cynoglossus_semilaevis
ENSCSAVG00000004820	-	83	61.654	ENSCVAG00000015896	bicc1a	91	42.196	Cyprinodon_variegatus
ENSCSAVG00000004820	-	69	59.091	ENSDARG00000061682	bicc1a	75	57.531	Danio_rerio
ENSCSAVG00000004820	-	96	43.082	ENSDNOG00000009338	BICC1	95	44.128	Dasypus_novemcinctus
ENSCSAVG00000004820	-	100	44.951	ENSDORG00000011450	Bicc1	93	45.445	Dipodomys_ordii
ENSCSAVG00000004820	-	76	53.943	ENSETEG00000010754	BICC1	68	54.152	Echinops_telfairi
ENSCSAVG00000004820	-	67	49.231	ENSEBUG00000016015	-	66	50.000	Eptatretus_burgeri
ENSCSAVG00000004820	-	99	44.336	ENSEASG00005013784	BICC1	93	45.235	Equus_asinus_asinus
ENSCSAVG00000004820	-	99	44.336	ENSECAG00000013979	BICC1	95	42.746	Equus_caballus
ENSCSAVG00000004820	-	73	64.062	ENSEEUG00000001269	BICC1	64	64.062	Erinaceus_europaeus
ENSCSAVG00000004820	-	100	42.641	ENSELUG00000005613	bicc1a	91	42.749	Esox_lucius
ENSCSAVG00000004820	-	100	44.000	ENSFCAG00000006211	BICC1	85	45.235	Felis_catus
ENSCSAVG00000004820	-	96	39.935	ENSFALG00000002247	BICC1	72	54.933	Ficedula_albicollis
ENSCSAVG00000004820	-	98	43.889	ENSFDAG00000016201	BICC1	98	44.419	Fukomys_damarensis
ENSCSAVG00000004820	-	100	37.675	ENSFHEG00000022447	bicc1a	91	36.585	Fundulus_heteroclitus
ENSCSAVG00000004820	-	100	41.622	ENSGMOG00000018749	bicc1a	90	41.989	Gadus_morhua
ENSCSAVG00000004820	-	99	43.182	ENSGALG00000036095	BICC1	93	42.746	Gallus_gallus
ENSCSAVG00000004820	-	100	43.534	ENSGAFG00000012165	bicc1a	93	42.059	Gambusia_affinis
ENSCSAVG00000004820	-	100	41.801	ENSGACG00000010043	bicc1a	59	62.873	Gasterosteus_aculeatus
ENSCSAVG00000004820	-	96	43.820	ENSGAGG00000012189	BICC1	97	43.240	Gopherus_agassizii
ENSCSAVG00000004820	-	100	45.277	ENSGGOG00000005484	BICC1	92	44.863	Gorilla_gorilla
ENSCSAVG00000004820	-	100	43.488	ENSHBUG00000016079	bicc1a	91	42.996	Haplochromis_burtoni
ENSCSAVG00000004820	-	100	44.517	ENSHGLG00000005632	-	93	45.364	Heterocephalus_glaber_female
ENSCSAVG00000004820	-	100	44.625	ENSHGLG00100015631	-	93	45.364	Heterocephalus_glaber_male
ENSCSAVG00000004820	-	100	43.133	ENSHCOG00000017407	bicc1a	91	42.241	Hippocampus_comes
ENSCSAVG00000004820	-	83	55.070	ENSIPUG00000008467	bicc1	75	58.388	Ictalurus_punctatus
ENSCSAVG00000004820	-	100	45.217	ENSSTOG00000000168	BICC1	98	44.728	Ictidomys_tridecemlineatus
ENSCSAVG00000004820	-	99	43.996	ENSJJAG00000015090	Bicc1	95	45.645	Jaculus_jaculus
ENSCSAVG00000004820	-	69	63.588	ENSKMAG00000000780	bicc1a	69	56.957	Kryptolebias_marmoratus
ENSCSAVG00000004820	-	100	42.842	ENSLBEG00000021160	bicc1a	91	42.333	Labrus_bergylta
ENSCSAVG00000004820	-	93	41.714	ENSLACG00000010091	BICC1	95	43.905	Latimeria_chalumnae
ENSCSAVG00000004820	-	100	44.983	ENSLOCG00000006500	bicc1a	91	44.939	Lepisosteus_oculatus
ENSCSAVG00000004820	-	93	42.676	ENSLAFG00000007749	BICC1	95	43.224	Loxodonta_africana
ENSCSAVG00000004820	-	100	45.674	ENSMFAG00000036177	BICC1	93	45.624	Macaca_fascicularis
ENSCSAVG00000004820	-	100	45.674	ENSMMUG00000015750	BICC1	93	45.624	Macaca_mulatta
ENSCSAVG00000004820	-	100	45.674	ENSMNEG00000009601	BICC1	93	45.624	Macaca_nemestrina
ENSCSAVG00000004820	-	100	45.385	ENSMLEG00000040006	BICC1	92	45.733	Mandrillus_leucophaeus
ENSCSAVG00000004820	-	100	42.411	ENSMAMG00000016363	bicc1a	91	43.167	Mastacembelus_armatus
ENSCSAVG00000004820	-	100	43.380	ENSMZEG00005027431	bicc1a	91	42.888	Maylandia_zebra
ENSCSAVG00000004820	-	93	38.330	ENSMGAG00000002729	BICC1	95	39.095	Meleagris_gallopavo
ENSCSAVG00000004820	-	99	44.518	ENSMICG00000002045	BICC1	93	46.095	Microcebus_murinus
ENSCSAVG00000004820	-	100	41.183	ENSMMOG00000008063	bicc1a	91	40.850	Mola_mola
ENSCSAVG00000004820	-	99	43.571	ENSMODG00000016125	BICC1	82	46.221	Monodelphis_domestica
ENSCSAVG00000004820	-	100	42.503	ENSMALG00000019124	bicc1a	94	42.591	Monopterus_albus
ENSCSAVG00000004820	-	100	44.018	MGP_CAROLIEiJ_G0015426	Bicc1	98	43.478	Mus_caroli
ENSCSAVG00000004820	-	100	44.114	ENSMUSG00000014329	Bicc1	98	43.636	Mus_musculus
ENSCSAVG00000004820	-	100	44.518	MGP_PahariEiJ_G0030842	Bicc1	93	44.676	Mus_pahari
ENSCSAVG00000004820	-	100	44.018	MGP_SPRETEiJ_G0016239	Bicc1	98	43.478	Mus_spretus
ENSCSAVG00000004820	-	90	36.906	ENSMPUG00000010431	BICC1	95	36.506	Mustela_putorius_furo
ENSCSAVG00000004820	-	95	41.216	ENSMLUG00000005170	BICC1	94	42.627	Myotis_lucifugus
ENSCSAVG00000004820	-	100	44.676	ENSNGAG00000023605	Bicc1	94	44.929	Nannospalax_galili
ENSCSAVG00000004820	-	100	44.779	ENSNLEG00000012284	BICC1	91	45.985	Nomascus_leucogenys
ENSCSAVG00000004820	-	57	65.625	ENSMEUG00000005472	BICC1	64	66.261	Notamacropus_eugenii
ENSCSAVG00000004820	-	65	60.920	ENSOPRG00000009804	-	64	60.920	Ochotona_princeps
ENSCSAVG00000004820	-	100	44.846	ENSODEG00000000545	BICC1	94	44.259	Octodon_degus
ENSCSAVG00000004820	-	100	43.165	ENSONIG00000000620	bicc1a	91	42.196	Oreochromis_niloticus
ENSCSAVG00000004820	-	82	46.613	ENSOANG00000013223	BICC1	76	51.803	Ornithorhynchus_anatinus
ENSCSAVG00000004820	-	100	45.285	ENSOCUG00000013696	BICC1	93	44.711	Oryctolagus_cuniculus
ENSCSAVG00000004820	-	68	62.821	ENSORLG00020010305	bicc1a	91	43.473	Oryzias_latipes_hni
ENSCSAVG00000004820	-	68	63.077	ENSORLG00015015393	bicc1a	91	43.826	Oryzias_latipes_hsok
ENSCSAVG00000004820	-	100	42.982	ENSOMEG00000009659	bicc1a	91	43.028	Oryzias_melastigma
ENSCSAVG00000004820	-	99	43.943	ENSOGAG00000000304	BICC1	91	45.655	Otolemur_garnettii
ENSCSAVG00000004820	-	100	45.225	ENSOARG00000004086	BICC1	91	45.175	Ovis_aries
ENSCSAVG00000004820	-	100	45.277	ENSPPAG00000035110	BICC1	92	45.833	Pan_paniscus
ENSCSAVG00000004820	-	100	45.306	ENSPPRG00000023988	BICC1	91	44.831	Panthera_pardus
ENSCSAVG00000004820	-	100	45.087	ENSPTIG00000006974	BICC1	92	44.831	Panthera_tigris_altaica
ENSCSAVG00000004820	-	100	45.277	ENSPTRG00000002520	BICC1	92	44.773	Pan_troglodytes
ENSCSAVG00000004820	-	98	44.955	ENSPANG00000022024	BICC1	90	45.136	Papio_anubis
ENSCSAVG00000004820	-	100	42.904	ENSPKIG00000025290	bicc1b	91	42.700	Paramormyrops_kingsleyae
ENSCSAVG00000004820	-	96	42.617	ENSPSIG00000009802	BICC1	95	42.953	Pelodiscus_sinensis
ENSCSAVG00000004820	-	96	40.636	ENSPMGG00000004168	bicc1a	92	39.726	Periophthalmus_magnuspinnatus
ENSCSAVG00000004820	-	99	43.013	ENSPEMG00000014055	Bicc1	95	44.884	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004820	-	67	61.864	ENSPMAG00000005468	-	63	61.864	Petromyzon_marinus
ENSCSAVG00000004820	-	100	45.316	ENSPCIG00000028868	BICC1	94	45.158	Phascolarctos_cinereus
ENSCSAVG00000004820	-	76	64.062	ENSPFOG00000018348	bicc1a	91	41.878	Poecilia_formosa
ENSCSAVG00000004820	-	100	43.146	ENSPLAG00000010377	bicc1a	91	42.150	Poecilia_latipinna
ENSCSAVG00000004820	-	100	42.888	ENSPMEG00000020413	bicc1a	91	42.366	Poecilia_mexicana
ENSCSAVG00000004820	-	78	62.469	ENSPREG00000010793	bicc1a	74	56.923	Poecilia_reticulata
ENSCSAVG00000004820	-	98	44.150	ENSPPYG00000002429	BICC1	95	44.816	Pongo_abelii
ENSCSAVG00000004820	-	70	46.530	ENSPCAG00000007197	BICC1	76	40.546	Procavia_capensis
ENSCSAVG00000004820	-	99	44.298	ENSPCOG00000028597	BICC1	91	45.875	Propithecus_coquereli
ENSCSAVG00000004820	-	100	43.355	ENSPVAG00000008004	BICC1	91	44.101	Pteropus_vampyrus
ENSCSAVG00000004820	-	100	43.380	ENSPNYG00000002818	bicc1a	91	42.888	Pundamilia_nyererei
ENSCSAVG00000004820	-	65	65.333	ENSPNAG00000019026	bicc1b	91	43.077	Pygocentrus_nattereri
ENSCSAVG00000004820	-	75	55.990	ENSPNAG00000026738	bicc1a	67	55.990	Pygocentrus_nattereri
ENSCSAVG00000004820	-	96	42.599	ENSRNOG00000000614	Bicc1	98	43.349	Rattus_norvegicus
ENSCSAVG00000004820	-	98	44.121	ENSRBIG00000030483	BICC1	92	43.946	Rhinopithecus_bieti
ENSCSAVG00000004820	-	98	44.766	ENSRROG00000017888	BICC1	98	44.584	Rhinopithecus_roxellana
ENSCSAVG00000004820	-	100	45.060	ENSSBOG00000029991	BICC1	98	44.419	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004820	-	100	45.316	ENSSHAG00000011416	BICC1	94	45.158	Sarcophilus_harrisii
ENSCSAVG00000004820	-	66	61.022	ENSSFOG00015008406	BICC1	62	59.640	Scleropages_formosus
ENSCSAVG00000004820	-	100	42.934	ENSSMAG00000017028	bicc1a	95	41.686	Scophthalmus_maximus
ENSCSAVG00000004820	-	100	42.411	ENSSDUG00000017080	bicc1a	91	42.549	Seriola_dumerili
ENSCSAVG00000004820	-	100	42.937	ENSSLDG00000015619	bicc1a	95	41.837	Seriola_lalandi_dorsalis
ENSCSAVG00000004820	-	98	44.170	ENSSARG00000011303	BICC1	95	44.183	Sorex_araneus
ENSCSAVG00000004820	-	100	43.272	ENSSPAG00000015300	bicc1a	91	42.873	Stegastes_partitus
ENSCSAVG00000004820	-	100	45.011	ENSSSCG00000010204	BICC1	97	44.804	Sus_scrofa
ENSCSAVG00000004820	-	97	42.777	ENSTGUG00000005584	BICC1	79	54.472	Taeniopygia_guttata
ENSCSAVG00000004820	-	100	42.105	ENSTRUG00000008560	bicc1a	62	61.443	Takifugu_rubripes
ENSCSAVG00000004820	-	100	42.795	ENSTNIG00000019377	bicc1a	73	60.859	Tetraodon_nigroviridis
ENSCSAVG00000004820	-	100	42.249	ENSTNIG00000017029	-	75	60.513	Tetraodon_nigroviridis
ENSCSAVG00000004820	-	97	41.104	ENSTTRG00000017309	BICC1	95	42.825	Tursiops_truncatus
ENSCSAVG00000004820	-	100	44.649	ENSUMAG00000006522	BICC1	90	44.940	Ursus_maritimus
ENSCSAVG00000004820	-	100	44.951	ENSVVUG00000008341	BICC1	94	44.469	Vulpes_vulpes
ENSCSAVG00000004820	-	81	43.396	ENSXETG00000005117	bicc1	99	43.261	Xenopus_tropicalis
ENSCSAVG00000004820	-	100	43.790	ENSXMAG00000007368	bicc1a	91	41.772	Xiphophorus_maculatus