EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004855 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6727 bases
Position: chrreftig_1779:15413-22139
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008164	NUC153	PF08159.12	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008272	-	2295	-	ENSCSAVP00000008164	697 (aa)	-	H2YS54

Gene Model

Click here to download ENSCSAVG00000004855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004855	-	99	51.915	ENSG00000115761	NOL10	99	52.408	Homo_sapiens
ENSCSAVG00000004855	-	99	50.360	ENSAPOG00000006771	nol10	97	50.215	Acanthochromis_polyacanthus
ENSCSAVG00000004855	-	99	51.852	ENSAMEG00000011438	NOL10	99	52.347	Ailuropoda_melanoleuca
ENSCSAVG00000004855	-	99	49.302	ENSACIG00000011256	nol10	98	49.721	Amphilophus_citrinellus
ENSCSAVG00000004855	-	98	48.468	ENSAOCG00000001044	nol10	98	48.615	Amphiprion_ocellaris
ENSCSAVG00000004855	-	99	49.928	ENSAPEG00000023044	nol10	98	49.928	Amphiprion_percula
ENSCSAVG00000004855	-	99	48.889	ENSATEG00000011452	nol10	98	48.780	Anabas_testudineus
ENSCSAVG00000004855	-	99	51.852	ENSAPLG00000009885	NOL10	99	52.422	Anas_platyrhynchos
ENSCSAVG00000004855	-	99	52.292	ENSACAG00000012738	NOL10	99	52.149	Anolis_carolinensis
ENSCSAVG00000004855	-	99	51.498	ENSANAG00000024937	NOL10	99	51.994	Aotus_nancymaae
ENSCSAVG00000004855	-	99	49.496	ENSACLG00000026238	nol10	98	50.072	Astatotilapia_calliptera
ENSCSAVG00000004855	-	99	48.194	ENSAMXG00000014006	nol10	98	48.821	Astyanax_mexicanus
ENSCSAVG00000004855	-	99	52.205	ENSBTAG00000002716	NOL10	99	52.347	Bos_taurus
ENSCSAVG00000004855	-	99	40.702	WBGene00017989	nol-10	97	40.584	Caenorhabditis_elegans
ENSCSAVG00000004855	-	99	51.641	ENSCJAG00000006602	NOL10	99	52.422	Callithrix_jacchus
ENSCSAVG00000004855	-	99	51.852	ENSCAFG00000003435	NOL10	99	52.347	Canis_familiaris
ENSCSAVG00000004855	-	99	51.852	ENSCAFG00020026722	NOL10	99	52.347	Canis_lupus_dingo
ENSCSAVG00000004855	-	99	47.117	ENSCHIG00000012935	NOL10	99	47.257	Capra_hircus
ENSCSAVG00000004855	-	99	52.422	ENSTSYG00000010119	NOL10	99	52.564	Carlito_syrichta
ENSCSAVG00000004855	-	96	50.147	ENSCAPG00000011046	NOL10	99	50.366	Cavia_aperea
ENSCSAVG00000004855	-	99	51.709	ENSCPOG00000007706	NOL10	99	52.347	Cavia_porcellus
ENSCSAVG00000004855	-	99	50.071	ENSCCAG00000027373	NOL10	99	50.570	Cebus_capucinus
ENSCSAVG00000004855	-	99	52.057	ENSCATG00000043643	NOL10	99	52.550	Cercocebus_atys
ENSCSAVG00000004855	-	99	51.645	ENSCLAG00000002234	NOL10	99	52.074	Chinchilla_lanigera
ENSCSAVG00000004855	-	99	51.915	ENSCSAG00000007229	NOL10	99	52.408	Chlorocebus_sabaeus
ENSCSAVG00000004855	-	93	50.076	ENSCHOG00000002784	NOL10	99	50.455	Choloepus_hoffmanni
ENSCSAVG00000004855	-	100	80.254	ENSCING00000005632	-	100	80.254	Ciona_intestinalis
ENSCSAVG00000004855	-	99	41.702	ENSCANG00000041386	NOL10	99	47.674	Colobus_angolensis_palliatus
ENSCSAVG00000004855	-	99	52.205	ENSCGRG00001009928	Nol10	99	52.205	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004855	-	99	52.205	ENSCGRG00000013251	Nol10	99	52.205	Cricetulus_griseus_crigri
ENSCSAVG00000004855	-	99	47.857	ENSCSEG00000017227	nol10	98	47.578	Cynoglossus_semilaevis
ENSCSAVG00000004855	-	99	49.298	ENSCVAG00000003369	nol10	98	49.930	Cyprinodon_variegatus
ENSCSAVG00000004855	-	99	49.790	ENSDARG00000020077	nol10	96	50.419	Danio_rerio
ENSCSAVG00000004855	-	99	48.939	ENSDNOG00000003577	NOL10	99	49.718	Dasypus_novemcinctus
ENSCSAVG00000004855	-	96	51.327	ENSDORG00000001331	Nol10	99	51.841	Dipodomys_ordii
ENSCSAVG00000004855	-	99	43.092	FBgn0261535	l(2)34Fd	99	43.383	Drosophila_melanogaster
ENSCSAVG00000004855	-	96	44.919	ENSETEG00000009068	NOL10	99	45.147	Echinops_telfairi
ENSCSAVG00000004855	-	99	48.464	ENSEBUG00000015283	nol10	96	49.275	Eptatretus_burgeri
ENSCSAVG00000004855	-	99	52.080	ENSEASG00005004919	NOL10	99	52.722	Equus_asinus_asinus
ENSCSAVG00000004855	-	99	52.080	ENSECAG00000015177	NOL10	99	52.722	Equus_caballus
ENSCSAVG00000004855	-	89	55.376	ENSEEUG00000006076	NOL10	89	55.376	Erinaceus_europaeus
ENSCSAVG00000004855	-	99	50.361	ENSELUG00000014763	nol10	97	50.504	Esox_lucius
ENSCSAVG00000004855	-	99	51.868	ENSFCAG00000009255	NOL10	99	52.511	Felis_catus
ENSCSAVG00000004855	-	96	52.065	ENSFALG00000006658	NOL10	97	51.917	Ficedula_albicollis
ENSCSAVG00000004855	-	99	51.293	ENSFDAG00000021249	NOL10	96	52.149	Fukomys_damarensis
ENSCSAVG00000004855	-	99	49.721	ENSFHEG00000008899	nol10	98	49.791	Fundulus_heteroclitus
ENSCSAVG00000004855	-	99	52.224	ENSGALG00000016445	NOL10	99	52.798	Gallus_gallus
ENSCSAVG00000004855	-	99	48.960	ENSGAFG00000019507	nol10	98	49.372	Gambusia_affinis
ENSCSAVG00000004855	-	98	50.578	ENSGACG00000013000	nol10	99	50.431	Gasterosteus_aculeatus
ENSCSAVG00000004855	-	99	51.773	ENSGAGG00000013214	NOL10	100	52.131	Gopherus_agassizii
ENSCSAVG00000004855	-	97	50.877	ENSGGOG00000034826	NOL10	99	51.462	Gorilla_gorilla
ENSCSAVG00000004855	-	99	49.209	ENSHBUG00000014831	nol10	98	49.711	Haplochromis_burtoni
ENSCSAVG00000004855	-	98	52.161	ENSHGLG00000001564	NOL10	99	52.354	Heterocephalus_glaber_female
ENSCSAVG00000004855	-	98	51.942	ENSHGLG00100008143	NOL10	99	52.347	Heterocephalus_glaber_male
ENSCSAVG00000004855	-	99	48.957	ENSHCOG00000011240	nol10	93	49.028	Hippocampus_comes
ENSCSAVG00000004855	-	99	48.006	ENSIPUG00000008691	nol10	98	49.655	Ictalurus_punctatus
ENSCSAVG00000004855	-	99	51.862	ENSSTOG00000005485	NOL10	99	52.571	Ictidomys_tridecemlineatus
ENSCSAVG00000004855	-	99	47.789	ENSJJAG00000013166	Nol10	99	48.433	Jaculus_jaculus
ENSCSAVG00000004855	-	99	45.833	ENSKMAG00000003400	nol10	97	48.024	Kryptolebias_marmoratus
ENSCSAVG00000004855	-	99	49.226	ENSLBEG00000023587	nol10	92	48.951	Labrus_bergylta
ENSCSAVG00000004855	-	99	52.806	ENSLACG00000004450	NOL10	96	53.010	Latimeria_chalumnae
ENSCSAVG00000004855	-	99	51.437	ENSLOCG00000016660	nol10	98	51.580	Lepisosteus_oculatus
ENSCSAVG00000004855	-	99	52.143	ENSLAFG00000010489	NOL10	99	52.924	Loxodonta_africana
ENSCSAVG00000004855	-	99	52.057	ENSMFAG00000041289	NOL10	99	52.550	Macaca_fascicularis
ENSCSAVG00000004855	-	99	52.199	ENSMMUG00000010671	NOL10	99	52.691	Macaca_mulatta
ENSCSAVG00000004855	-	99	52.057	ENSMNEG00000039685	NOL10	99	52.550	Macaca_nemestrina
ENSCSAVG00000004855	-	99	52.057	ENSMLEG00000011854	NOL10	99	52.550	Mandrillus_leucophaeus
ENSCSAVG00000004855	-	98	50.361	ENSMAMG00000014932	nol10	98	50.072	Mastacembelus_armatus
ENSCSAVG00000004855	-	99	48.133	ENSMZEG00005009662	nol10	98	48.271	Maylandia_zebra
ENSCSAVG00000004855	-	99	52.149	ENSMGAG00000014012	NOL10	99	52.722	Meleagris_gallopavo
ENSCSAVG00000004855	-	99	51.994	ENSMAUG00000010862	Nol10	99	51.994	Mesocricetus_auratus
ENSCSAVG00000004855	-	99	51.799	ENSMICG00000004805	NOL10	99	52.299	Microcebus_murinus
ENSCSAVG00000004855	-	99	51.994	ENSMOCG00000021564	Nol10	99	51.994	Microtus_ochrogaster
ENSCSAVG00000004855	-	99	48.128	ENSMMOG00000004871	nol10	96	48.801	Mola_mola
ENSCSAVG00000004855	-	99	52.782	ENSMODG00000014784	NOL10	99	53.704	Monodelphis_domestica
ENSCSAVG00000004855	-	91	47.006	ENSMALG00000012150	nol10	99	46.875	Monopterus_albus
ENSCSAVG00000004855	-	99	51.498	MGP_CAROLIEiJ_G0017636	Nol10	99	51.498	Mus_caroli
ENSCSAVG00000004855	-	99	51.641	ENSMUSG00000061458	Nol10	99	51.714	Mus_musculus
ENSCSAVG00000004855	-	99	48.300	MGP_PahariEiJ_G0029393	Nol10	99	48.369	Mus_pahari
ENSCSAVG00000004855	-	99	51.498	MGP_SPRETEiJ_G0018478	Nol10	99	51.498	Mus_spretus
ENSCSAVG00000004855	-	99	50.706	ENSMPUG00000013325	-	99	51.199	Mustela_putorius_furo
ENSCSAVG00000004855	-	99	51.868	ENSMLUG00000012309	NOL10	99	52.443	Myotis_lucifugus
ENSCSAVG00000004855	-	99	51.799	ENSNGAG00000015506	Nol10	99	52.299	Nannospalax_galili
ENSCSAVG00000004855	-	99	49.211	ENSNBRG00000011660	nol10	98	49.712	Neolamprologus_brichardi
ENSCSAVG00000004855	-	99	51.773	ENSNLEG00000013851	NOL10	99	52.266	Nomascus_leucogenys
ENSCSAVG00000004855	-	56	68.807	ENSMEUG00000005659	-	63	68.807	Notamacropus_eugenii
ENSCSAVG00000004855	-	78	50.000	ENSOPRG00000013092	-	77	50.000	Ochotona_princeps
ENSCSAVG00000004855	-	99	51.502	ENSODEG00000000508	NOL10	99	52.217	Octodon_degus
ENSCSAVG00000004855	-	99	49.716	ENSONIG00000019556	nol10	99	49.858	Oreochromis_niloticus
ENSCSAVG00000004855	-	77	47.124	ENSOANG00000014497	-	98	46.753	Ornithorhynchus_anatinus
ENSCSAVG00000004855	-	99	51.868	ENSOCUG00000016892	NOL10	99	52.367	Oryctolagus_cuniculus
ENSCSAVG00000004855	-	96	50.293	ENSORLG00000017767	nol10	99	48.006	Oryzias_latipes
ENSCSAVG00000004855	-	99	50.855	ENSORLG00020015571	nol10	99	50.785	Oryzias_latipes_hni
ENSCSAVG00000004855	-	99	49.315	ENSORLG00015011988	nol10	99	49.311	Oryzias_latipes_hsok
ENSCSAVG00000004855	-	99	50.142	ENSOMEG00000008584	nol10	99	49.858	Oryzias_melastigma
ENSCSAVG00000004855	-	99	52.224	ENSOGAG00000010494	NOL10	99	52.367	Otolemur_garnettii
ENSCSAVG00000004855	-	99	52.279	ENSOARG00000015507	NOL10	99	52.422	Ovis_aries
ENSCSAVG00000004855	-	99	51.915	ENSPPAG00000010631	NOL10	99	52.408	Pan_paniscus
ENSCSAVG00000004855	-	99	52.155	ENSPPRG00000017868	NOL10	99	52.798	Panthera_pardus
ENSCSAVG00000004855	-	96	51.187	ENSPTIG00000012456	NOL10	96	51.929	Panthera_tigris_altaica
ENSCSAVG00000004855	-	99	51.915	ENSPTRG00000011651	NOL10	99	52.915	Pan_troglodytes
ENSCSAVG00000004855	-	99	52.340	ENSPANG00000006259	NOL10	99	52.975	Papio_anubis
ENSCSAVG00000004855	-	99	51.719	ENSPKIG00000023459	nol10	96	51.070	Paramormyrops_kingsleyae
ENSCSAVG00000004855	-	93	51.145	ENSPSIG00000015359	NOL10	100	51.450	Pelodiscus_sinensis
ENSCSAVG00000004855	-	99	48.854	ENSPMGG00000006105	nol10	98	49.000	Periophthalmus_magnuspinnatus
ENSCSAVG00000004855	-	99	51.567	ENSPEMG00000008676	Nol10	99	51.636	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004855	-	94	50.449	ENSPMAG00000002809	nol10	100	50.520	Petromyzon_marinus
ENSCSAVG00000004855	-	99	52.354	ENSPCIG00000022730	NOL10	99	53.523	Phascolarctos_cinereus
ENSCSAVG00000004855	-	99	49.162	ENSPFOG00000009689	nol10	98	49.372	Poecilia_formosa
ENSCSAVG00000004855	-	99	50.000	ENSPLAG00000023264	nol10	98	50.287	Poecilia_latipinna
ENSCSAVG00000004855	-	99	50.287	ENSPMEG00000022288	nol10	98	50.358	Poecilia_mexicana
ENSCSAVG00000004855	-	99	50.000	ENSPREG00000004461	nol10	98	50.072	Poecilia_reticulata
ENSCSAVG00000004855	-	99	52.975	ENSPPYG00000012653	NOL10	99	52.691	Pongo_abelii
ENSCSAVG00000004855	-	99	40.490	ENSPCAG00000002635	NOL10	99	41.151	Procavia_capensis
ENSCSAVG00000004855	-	99	41.871	ENSPCOG00000024792	NOL10	99	42.385	Propithecus_coquereli
ENSCSAVG00000004855	-	99	48.921	ENSPVAG00000006339	NOL10	99	49.209	Pteropus_vampyrus
ENSCSAVG00000004855	-	99	49.425	ENSPNYG00000020549	nol10	97	49.928	Pundamilia_nyererei
ENSCSAVG00000004855	-	99	49.211	ENSPNAG00000001397	nol10	98	49.215	Pygocentrus_nattereri
ENSCSAVG00000004855	-	99	51.425	ENSRNOG00000005344	Nol10	99	51.709	Rattus_norvegicus
ENSCSAVG00000004855	-	99	51.146	ENSRBIG00000043507	NOL10	99	52.006	Rhinopithecus_bieti
ENSCSAVG00000004855	-	99	51.915	ENSRROG00000043208	NOL10	99	52.408	Rhinopithecus_roxellana
ENSCSAVG00000004855	-	75	44.299	YGR145W	-	85	40.645	Saccharomyces_cerevisiae
ENSCSAVG00000004855	-	99	43.121	ENSSBOG00000025651	NOL10	99	43.768	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004855	-	53	43.085	ENSSHAG00000001111	-	99	44.681	Sarcophilus_harrisii
ENSCSAVG00000004855	-	99	49.930	ENSSFOG00015003083	nol10	98	50.629	Scleropages_formosus
ENSCSAVG00000004855	-	99	46.187	ENSSMAG00000014757	nol10	97	48.892	Scophthalmus_maximus
ENSCSAVG00000004855	-	99	48.333	ENSSDUG00000019201	nol10	98	48.476	Seriola_dumerili
ENSCSAVG00000004855	-	99	48.699	ENSSLDG00000015011	nol10	98	48.559	Seriola_lalandi_dorsalis
ENSCSAVG00000004855	-	100	45.198	ENSSARG00000005947	NOL10	100	45.480	Sorex_araneus
ENSCSAVG00000004855	-	99	49.000	ENSSPUG00000015811	NOL10	99	49.358	Sphenodon_punctatus
ENSCSAVG00000004855	-	99	49.028	ENSSPAG00000019552	nol10	98	48.892	Stegastes_partitus
ENSCSAVG00000004855	-	99	52.422	ENSSSCG00000008635	NOL10	99	53.201	Sus_scrofa
ENSCSAVG00000004855	-	99	51.773	ENSTGUG00000013047	NOL10	99	51.773	Taeniopygia_guttata
ENSCSAVG00000004855	-	99	44.364	ENSTRUG00000007365	nol10	97	44.092	Takifugu_rubripes
ENSCSAVG00000004855	-	99	49.642	ENSTNIG00000005411	nol10	99	49.785	Tetraodon_nigroviridis
ENSCSAVG00000004855	-	75	48.084	ENSTBEG00000000452	NOL10	97	44.574	Tupaia_belangeri
ENSCSAVG00000004855	-	96	48.601	ENSTTRG00000013158	NOL10	99	49.046	Tursiops_truncatus
ENSCSAVG00000004855	-	99	46.884	ENSUAMG00000012342	NOL10	99	47.383	Ursus_americanus
ENSCSAVG00000004855	-	99	51.852	ENSUMAG00000003385	NOL10	96	52.422	Ursus_maritimus
ENSCSAVG00000004855	-	99	51.852	ENSVVUG00000001394	NOL10	99	52.347	Vulpes_vulpes
ENSCSAVG00000004855	-	99	50.636	ENSXETG00000003518	nol10	99	51.202	Xenopus_tropicalis
ENSCSAVG00000004855	-	99	50.000	ENSXMAG00000018498	nol10	98	50.072	Xiphophorus_maculatus