EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004868 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2493 bases
Position: chrreftig_132:830150-832642
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008182	CNOT11	PF10155.9	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008291	-	825	-	ENSCSAVP00000008183	228 (aa)	-	H2YS73
ENSCSAVT00000008290	-	1024	-	ENSCSAVP00000008182	296 (aa)	-	H2YS72

Gene Model

Click here to download ENSCSAVG00000004868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004868	-	100	97.659	ENSCSAVG00000000886	-	100	97.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004868	-	95	59.459	ENSG00000158435	CNOT11	71	81.111	Homo_sapiens
ENSCSAVG00000004868	-	99	41.714	ENSAPOG00000020231	cnot11	76	41.714	Acanthochromis_polyacanthus
ENSCSAVG00000004868	-	96	59.459	ENSAMEG00000015585	CNOT11	58	59.459	Ailuropoda_melanoleuca
ENSCSAVG00000004868	-	99	45.739	ENSACIG00000002791	cnot11	78	45.429	Amphilophus_citrinellus
ENSCSAVG00000004868	-	99	45.714	ENSAOCG00000005087	cnot11	78	45.714	Amphiprion_ocellaris
ENSCSAVG00000004868	-	99	45.714	ENSAPEG00000019235	cnot11	89	45.714	Amphiprion_percula
ENSCSAVG00000004868	-	99	45.429	ENSATEG00000014714	cnot11	78	45.429	Anabas_testudineus
ENSCSAVG00000004868	-	84	60.541	ENSAPLG00000002957	CNOT11	56	60.541	Anas_platyrhynchos
ENSCSAVG00000004868	-	96	58.919	ENSACAG00000007718	CNOT11	62	58.919	Anolis_carolinensis
ENSCSAVG00000004868	-	96	59.459	ENSANAG00000028092	CNOT11	55	59.459	Aotus_nancymaae
ENSCSAVG00000004868	-	99	46.591	ENSACLG00000015057	cnot11	76	46.591	Astatotilapia_calliptera
ENSCSAVG00000004868	-	99	47.564	ENSAMXG00000012843	cnot11	78	47.564	Astyanax_mexicanus
ENSCSAVG00000004868	-	95	59.459	ENSBTAG00000008267	CNOT11	55	59.459	Bos_taurus
ENSCSAVG00000004868	-	96	59.459	ENSCJAG00000021229	CNOT11	55	59.459	Callithrix_jacchus
ENSCSAVG00000004868	-	95	59.459	ENSCAFG00000002199	CNOT11	54	59.459	Canis_familiaris
ENSCSAVG00000004868	-	95	59.459	ENSCAFG00020024562	CNOT11	54	59.459	Canis_lupus_dingo
ENSCSAVG00000004868	-	95	59.459	ENSCHIG00000026686	CNOT11	56	59.459	Capra_hircus
ENSCSAVG00000004868	-	95	39.159	ENSTSYG00000031278	-	64	39.159	Carlito_syrichta
ENSCSAVG00000004868	-	95	60.541	ENSCPOG00000012029	CNOT11	54	60.541	Cavia_porcellus
ENSCSAVG00000004868	-	96	59.459	ENSCCAG00000027582	CNOT11	55	59.459	Cebus_capucinus
ENSCSAVG00000004868	-	99	54.515	ENSCATG00000040259	CNOT11	65	54.333	Cercocebus_atys
ENSCSAVG00000004868	-	96	59.459	ENSCSAG00000017167	CNOT11	55	59.459	Chlorocebus_sabaeus
ENSCSAVG00000004868	-	96	60.000	ENSCPBG00000004780	CNOT11	55	60.000	Chrysemys_picta_bellii
ENSCSAVG00000004868	-	72	65.328	ENSCING00000005938	-	50	87.568	Ciona_intestinalis
ENSCSAVG00000004868	-	96	59.459	ENSCANG00000038129	CNOT11	62	59.459	Colobus_angolensis_palliatus
ENSCSAVG00000004868	-	95	60.000	ENSCGRG00001018815	Cnot11	55	60.000	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004868	-	95	60.000	ENSCGRG00000003113	-	55	60.000	Cricetulus_griseus_crigri
ENSCSAVG00000004868	-	99	48.368	ENSCSEG00000020759	cnot11	77	48.060	Cynoglossus_semilaevis
ENSCSAVG00000004868	-	99	46.132	ENSCVAG00000022960	cnot11	78	46.132	Cyprinodon_variegatus
ENSCSAVG00000004868	-	99	46.132	ENSDARG00000068596	cnot11	78	46.132	Danio_rerio
ENSCSAVG00000004868	-	95	59.459	ENSDNOG00000011948	CNOT11	55	59.459	Dasypus_novemcinctus
ENSCSAVG00000004868	-	96	60.000	ENSDORG00000004481	Cnot11	54	81.250	Dipodomys_ordii
ENSCSAVG00000004868	-	96	59.459	ENSETEG00000002098	CNOT11	55	59.459	Echinops_telfairi
ENSCSAVG00000004868	-	99	44.798	ENSEBUG00000011268	cnot11	93	44.798	Eptatretus_burgeri
ENSCSAVG00000004868	-	96	59.459	ENSEASG00005018296	CNOT11	55	59.459	Equus_asinus_asinus
ENSCSAVG00000004868	-	96	59.459	ENSECAG00000011967	CNOT11	65	50.000	Equus_caballus
ENSCSAVG00000004868	-	99	46.857	ENSELUG00000009042	cnot11	78	46.857	Esox_lucius
ENSCSAVG00000004868	-	95	59.459	ENSFCAG00000006924	CNOT11	55	59.459	Felis_catus
ENSCSAVG00000004868	-	95	60.541	ENSFALG00000003802	CNOT11	63	60.541	Ficedula_albicollis
ENSCSAVG00000004868	-	99	45.869	ENSFHEG00000001754	cnot11	78	45.559	Fundulus_heteroclitus
ENSCSAVG00000004868	-	99	46.000	ENSGMOG00000005200	cnot11	78	46.000	Gadus_morhua
ENSCSAVG00000004868	-	97	60.541	ENSGALG00000039563	CNOT11	60	60.541	Gallus_gallus
ENSCSAVG00000004868	-	99	45.714	ENSGAFG00000004433	cnot11	78	45.714	Gambusia_affinis
ENSCSAVG00000004868	-	99	46.286	ENSGACG00000007941	cnot11	78	46.286	Gasterosteus_aculeatus
ENSCSAVG00000004868	-	96	60.000	ENSGAGG00000004292	CNOT11	59	60.000	Gopherus_agassizii
ENSCSAVG00000004868	-	99	46.591	ENSHBUG00000020454	cnot11	78	46.286	Haplochromis_burtoni
ENSCSAVG00000004868	-	96	60.000	ENSHGLG00000005196	CNOT11	54	81.250	Heterocephalus_glaber_female
ENSCSAVG00000004868	-	96	60.000	ENSHGLG00100005946	CNOT11	54	81.250	Heterocephalus_glaber_male
ENSCSAVG00000004868	-	99	47.826	ENSHCOG00000001826	cnot11	77	47.826	Hippocampus_comes
ENSCSAVG00000004868	-	99	47.009	ENSIPUG00000005134	cnot11	78	47.009	Ictalurus_punctatus
ENSCSAVG00000004868	-	96	60.000	ENSSTOG00000002674	CNOT11	54	81.250	Ictidomys_tridecemlineatus
ENSCSAVG00000004868	-	96	60.000	ENSJJAG00000017976	Cnot11	54	81.250	Jaculus_jaculus
ENSCSAVG00000004868	-	99	45.869	ENSKMAG00000005191	cnot11	78	45.869	Kryptolebias_marmoratus
ENSCSAVG00000004868	-	99	46.154	ENSLBEG00000022855	cnot11	78	46.154	Labrus_bergylta
ENSCSAVG00000004868	-	97	58.378	ENSLACG00000012383	CNOT11	64	58.378	Latimeria_chalumnae
ENSCSAVG00000004868	-	99	43.553	ENSLOCG00000010579	cnot11	78	43.553	Lepisosteus_oculatus
ENSCSAVG00000004868	-	95	59.459	ENSMFAG00000044449	CNOT11	56	59.459	Macaca_fascicularis
ENSCSAVG00000004868	-	95	59.459	ENSMMUG00000001147	CNOT11	55	59.459	Macaca_mulatta
ENSCSAVG00000004868	-	95	59.459	ENSMNEG00000044355	CNOT11	56	59.459	Macaca_nemestrina
ENSCSAVG00000004868	-	99	44.669	ENSMLEG00000024913	CNOT11	69	44.540	Mandrillus_leucophaeus
ENSCSAVG00000004868	-	99	45.869	ENSMAMG00000013914	cnot11	78	45.869	Mastacembelus_armatus
ENSCSAVG00000004868	-	99	46.286	ENSMZEG00005020316	cnot11	78	46.286	Maylandia_zebra
ENSCSAVG00000004868	-	63	60.215	ENSMGAG00000014802	CNOT11	63	60.215	Meleagris_gallopavo
ENSCSAVG00000004868	-	96	60.000	ENSMAUG00000008251	Cnot11	54	81.250	Mesocricetus_auratus
ENSCSAVG00000004868	-	95	59.459	ENSMICG00000002973	CNOT11	55	59.459	Microcebus_murinus
ENSCSAVG00000004868	-	95	60.000	ENSMOCG00000020059	Cnot11	54	81.250	Microtus_ochrogaster
ENSCSAVG00000004868	-	99	46.000	ENSMMOG00000013493	cnot11	78	46.000	Mola_mola
ENSCSAVG00000004868	-	96	58.919	ENSMODG00000001737	CNOT11	55	58.919	Monodelphis_domestica
ENSCSAVG00000004868	-	99	46.264	ENSMALG00000013293	cnot11	77	46.264	Monopterus_albus
ENSCSAVG00000004868	-	95	60.000	MGP_CAROLIEiJ_G0014071	Cnot11	54	81.250	Mus_caroli
ENSCSAVG00000004868	-	95	60.000	ENSMUSG00000003135	Cnot11	54	81.250	Mus_musculus
ENSCSAVG00000004868	-	95	60.000	MGP_PahariEiJ_G0027318	Cnot11	54	81.250	Mus_pahari
ENSCSAVG00000004868	-	95	60.000	MGP_SPRETEiJ_G0014875	Cnot11	54	81.250	Mus_spretus
ENSCSAVG00000004868	-	96	59.459	ENSMPUG00000012207	CNOT11	55	59.459	Mustela_putorius_furo
ENSCSAVG00000004868	-	96	60.541	ENSMLUG00000004555	CNOT11	55	60.541	Myotis_lucifugus
ENSCSAVG00000004868	-	96	60.000	ENSNGAG00000014276	Cnot11	54	81.250	Nannospalax_galili
ENSCSAVG00000004868	-	99	46.286	ENSNBRG00000014731	cnot11	78	46.286	Neolamprologus_brichardi
ENSCSAVG00000004868	-	96	59.459	ENSNLEG00000014472	CNOT11	57	59.459	Nomascus_leucogenys
ENSCSAVG00000004868	-	96	58.919	ENSMEUG00000004695	CNOT11	56	58.919	Notamacropus_eugenii
ENSCSAVG00000004868	-	96	60.000	ENSODEG00000007133	CNOT11	54	81.250	Octodon_degus
ENSCSAVG00000004868	-	99	46.286	ENSONIG00000016162	cnot11	78	46.286	Oreochromis_niloticus
ENSCSAVG00000004868	-	99	46.686	ENSOANG00000013148	CNOT11	74	46.686	Ornithorhynchus_anatinus
ENSCSAVG00000004868	-	99	45.584	ENSORLG00000014270	cnot11	78	45.584	Oryzias_latipes
ENSCSAVG00000004868	-	92	45.619	ENSORLG00020005490	cnot11	72	46.667	Oryzias_latipes_hni
ENSCSAVG00000004868	-	99	45.584	ENSOMEG00000014389	cnot11	78	45.584	Oryzias_melastigma
ENSCSAVG00000004868	-	96	59.459	ENSOGAG00000014506	CNOT11	55	59.459	Otolemur_garnettii
ENSCSAVG00000004868	-	95	59.459	ENSOARG00000013243	CNOT11	55	59.459	Ovis_aries
ENSCSAVG00000004868	-	87	59.459	ENSPPAG00000033121	CNOT11	59	59.459	Pan_paniscus
ENSCSAVG00000004868	-	95	59.459	ENSPPRG00000025043	CNOT11	55	59.459	Panthera_pardus
ENSCSAVG00000004868	-	95	59.459	ENSPTRG00000012290	CNOT11	55	59.459	Pan_troglodytes
ENSCSAVG00000004868	-	95	59.459	ENSPANG00000023665	CNOT11	56	59.459	Papio_anubis
ENSCSAVG00000004868	-	99	47.278	ENSPKIG00000019709	cnot11	84	47.278	Paramormyrops_kingsleyae
ENSCSAVG00000004868	-	63	60.000	ENSPSIG00000017469	CNOT11	57	60.000	Pelodiscus_sinensis
ENSCSAVG00000004868	-	99	46.286	ENSPMGG00000000573	cnot11	78	46.286	Periophthalmus_magnuspinnatus
ENSCSAVG00000004868	-	99	45.326	ENSPMAG00000001860	cnot11	78	45.326	Petromyzon_marinus
ENSCSAVG00000004868	-	99	45.714	ENSPFOG00000000176	cnot11	78	45.714	Poecilia_formosa
ENSCSAVG00000004868	-	99	46.023	ENSPLAG00000023797	cnot11	78	45.714	Poecilia_latipinna
ENSCSAVG00000004868	-	99	45.714	ENSPMEG00000015700	cnot11	78	45.714	Poecilia_mexicana
ENSCSAVG00000004868	-	99	45.714	ENSPREG00000011520	cnot11	78	45.714	Poecilia_reticulata
ENSCSAVG00000004868	-	95	59.459	ENSPPYG00000012103	CNOT11	55	59.459	Pongo_abelii
ENSCSAVG00000004868	-	96	59.459	ENSPCOG00000022088	CNOT11	55	59.459	Propithecus_coquereli
ENSCSAVG00000004868	-	96	59.459	ENSPVAG00000002962	CNOT11	61	59.459	Pteropus_vampyrus
ENSCSAVG00000004868	-	99	46.286	ENSPNYG00000023499	cnot11	78	46.286	Pundamilia_nyererei
ENSCSAVG00000004868	-	99	47.143	ENSPNAG00000006187	cnot11	78	47.143	Pygocentrus_nattereri
ENSCSAVG00000004868	-	95	60.000	ENSRNOG00000023220	Cnot11	56	60.000	Rattus_norvegicus
ENSCSAVG00000004868	-	96	59.459	ENSRBIG00000006823	CNOT11	55	59.459	Rhinopithecus_bieti
ENSCSAVG00000004868	-	96	59.459	ENSRROG00000033116	CNOT11	55	59.459	Rhinopithecus_roxellana
ENSCSAVG00000004868	-	96	59.459	ENSSBOG00000030189	CNOT11	55	59.459	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004868	-	95	58.919	ENSSHAG00000006432	CNOT11	62	58.919	Sarcophilus_harrisii
ENSCSAVG00000004868	-	99	46.526	ENSSFOG00015002194	cnot11	77	46.526	Scleropages_formosus
ENSCSAVG00000004868	-	99	46.571	ENSSMAG00000010790	cnot11	78	46.571	Scophthalmus_maximus
ENSCSAVG00000004868	-	99	46.286	ENSSDUG00000012467	cnot11	78	46.286	Seriola_dumerili
ENSCSAVG00000004868	-	99	46.286	ENSSLDG00000020769	cnot11	78	46.286	Seriola_lalandi_dorsalis
ENSCSAVG00000004868	-	63	52.973	ENSSARG00000006032	CNOT11	54	52.973	Sorex_araneus
ENSCSAVG00000004868	-	96	60.000	ENSSPUG00000012189	CNOT11	61	60.000	Sphenodon_punctatus
ENSCSAVG00000004868	-	99	46.000	ENSSPAG00000005202	cnot11	78	46.000	Stegastes_partitus
ENSCSAVG00000004868	-	95	59.459	ENSSSCG00000008167	CNOT11	55	59.459	Sus_scrofa
ENSCSAVG00000004868	-	94	60.541	ENSTGUG00000009952	-	63	60.541	Taeniopygia_guttata
ENSCSAVG00000004868	-	63	58.919	ENSTGUG00000015810	-	64	58.919	Taeniopygia_guttata
ENSCSAVG00000004868	-	99	46.154	ENSTRUG00000016939	cnot11	78	46.154	Takifugu_rubripes
ENSCSAVG00000004868	-	89	55.676	ENSTBEG00000016383	CNOT11	50	55.676	Tupaia_belangeri
ENSCSAVG00000004868	-	96	59.459	ENSTTRG00000016449	CNOT11	55	59.459	Tursiops_truncatus
ENSCSAVG00000004868	-	96	59.459	ENSUAMG00000022337	CNOT11	55	59.459	Ursus_americanus
ENSCSAVG00000004868	-	89	59.459	ENSVVUG00000028664	CNOT11	55	59.459	Vulpes_vulpes
ENSCSAVG00000004868	-	95	60.000	ENSXETG00000033799	CNOT11	62	60.000	Xenopus_tropicalis
ENSCSAVG00000004868	-	99	46.000	ENSXCOG00000008490	cnot11	78	46.000	Xiphophorus_couchianus
ENSCSAVG00000004868	-	99	46.000	ENSXMAG00000008671	cnot11	78	46.000	Xiphophorus_maculatus