EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004871 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2862 bases
Position: chrreftig_24:284169-287030
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008186	2OG-FeII_Oxy	PF03171.20	5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008294	-	1242	-	ENSCSAVP00000008186	193 (aa)	-	H2YS76

Gene Model

Click here to download ENSCSAVG00000004871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004871	-	90	39.080	ENSCSAVG00000001775	-	99	39.080
ENSCSAVG00000004871	-	91	41.209	ENSCSAVG00000000201	-	92	42.958
ENSCSAVG00000004871	-	89	38.596	ENSCSAVG00000004616	-	53	38.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004871	-	99	39.378	ENSAPOG00000011678	si:dkey-10o6.2	61	39.378	Acanthochromis_polyacanthus
ENSCSAVG00000004871	-	98	39.791	ENSACIG00000011675	-	56	39.791	Amphilophus_citrinellus
ENSCSAVG00000004871	-	98	37.696	ENSACLG00000023011	si:dkey-10o6.2	56	37.696	Astatotilapia_calliptera
ENSCSAVG00000004871	-	100	76.410	ENSCING00000007255	-	59	76.410	Ciona_intestinalis
ENSCSAVG00000004871	-	99	34.197	ENSCING00000012500	-	57	34.197	Ciona_intestinalis
ENSCSAVG00000004871	-	90	41.667	ENSCING00000016920	-	53	41.667	Ciona_intestinalis
ENSCSAVG00000004871	-	91	45.055	ENSCING00000022311	-	56	45.055	Ciona_intestinalis
ENSCSAVG00000004871	-	100	37.629	ENSCVAG00000015074	si:dkey-10o6.2	57	37.629	Cyprinodon_variegatus
ENSCSAVG00000004871	-	85	30.058	FBgn0053093	CG33093	53	30.058	Drosophila_melanogaster
ENSCSAVG00000004871	-	79	30.000	FBgn0038981	CG5346	52	30.000	Drosophila_melanogaster
ENSCSAVG00000004871	-	100	38.144	ENSFHEG00000019035	si:dkey-10o6.2	59	36.765	Fundulus_heteroclitus
ENSCSAVG00000004871	-	79	45.098	ENSGMOG00000018989	si:dkey-10o6.2	50	45.098	Gadus_morhua
ENSCSAVG00000004871	-	98	37.696	ENSHBUG00000008853	si:dkey-10o6.2	56	37.696	Haplochromis_burtoni
ENSCSAVG00000004871	-	99	37.500	ENSKMAG00000006197	si:dkey-10o6.2	56	37.500	Kryptolebias_marmoratus
ENSCSAVG00000004871	-	98	40.314	ENSLBEG00000003823	si:dkey-10o6.2	51	40.314	Labrus_bergylta
ENSCSAVG00000004871	-	99	38.860	ENSMAMG00000023026	-	56	38.860	Mastacembelus_armatus
ENSCSAVG00000004871	-	99	38.342	ENSMAMG00000023025	-	56	38.342	Mastacembelus_armatus
ENSCSAVG00000004871	-	98	37.173	ENSMZEG00005012018	si:dkey-10o6.2	56	37.173	Maylandia_zebra
ENSCSAVG00000004871	-	98	34.031	ENSNBRG00000015840	si:dkey-10o6.2	53	34.031	Neolamprologus_brichardi
ENSCSAVG00000004871	-	98	38.947	ENSONIG00000015572	si:dkey-10o6.2	56	38.743	Oreochromis_niloticus
ENSCSAVG00000004871	-	60	49.138	ENSORLG00015016590	-	56	49.138	Oryzias_latipes_hsok
ENSCSAVG00000004871	-	78	46.358	ENSPKIG00000024109	-	57	46.358	Paramormyrops_kingsleyae
ENSCSAVG00000004871	-	78	44.371	ENSPMEG00000020748	si:dkey-10o6.2	67	44.371	Poecilia_mexicana
ENSCSAVG00000004871	-	100	39.691	ENSPREG00000005108	si:dkey-10o6.2	58	39.691	Poecilia_reticulata
ENSCSAVG00000004871	-	98	37.696	ENSPNYG00000010698	si:dkey-10o6.2	56	37.696	Pundamilia_nyererei