EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000004895 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
1638 bases
Position
chrreftig_72:726763-728400
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000008223ResIIIPF04851.153.9e-0711
ENSCSAVP00000008223DEADPF00270.291.1e-4611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000008331-1593-ENSCSAVP00000008223531 (aa)-H2YSB3
Gene Model
Click here to download ENSCSAVG00000004895's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004895's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000004895-7333.417ENSCSAVG00000000522-9233.417
ENSCSAVG00000004895-7135.142ENSCSAVG00000011566-8435.142
ENSCSAVG00000004895-5637.667ENSCSAVG00000006949-6936.957
ENSCSAVG00000004895-6632.418ENSCSAVG00000004304-5632.303
ENSCSAVG00000004895-6030.114ENSCSAVG00000004158-7130.114
ENSCSAVG00000004895-8130.575ENSCSAVG00000002353-6530.841
ENSCSAVG00000004895-5934.049ENSCSAVG00000002180-8334.049
ENSCSAVG00000004895-8142.529ENSCSAVG00000003023-7742.529
ENSCSAVG00000004895-6644.118ENSCSAVG00000003028-6144.118
ENSCSAVG00000004895-7934.656ENSCSAVG00000004227-9234.656
ENSCSAVG00000004895-8536.059ENSCSAVG00000003375-8634.156
ENSCSAVG00000004895-6634.278ENSCSAVG00000008916-10035.277
ENSCSAVG00000004895-6731.302ENSCSAVG00000009920-9431.302
ENSCSAVG00000004895-6531.527ENSCSAVG00000010817-6231.527
ENSCSAVG00000004895-6432.277ENSCSAVG00000002162-8031.638
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000004895-9574.175ENSG00000088205DDX1810075.966Homo_sapiens
ENSCSAVG00000004895-8681.441ENSAPOG00000019022ddx187876.248Acanthochromis_polyacanthus
ENSCSAVG00000004895-9670.334ENSAMEG00000012626DDX187868.441Ailuropoda_melanoleuca
ENSCSAVG00000004895-8680.568ENSACIG00000018534ddx187877.160Amphilophus_citrinellus
ENSCSAVG00000004895-8681.441ENSAOCG00000012438ddx187774.231Amphiprion_ocellaris
ENSCSAVG00000004895-8681.441ENSAPEG00000002348ddx187774.231Amphiprion_percula
ENSCSAVG00000004895-8680.786ENSATEG00000006330ddx188574.659Anabas_testudineus
ENSCSAVG00000004895-9177.801ENSAPLG00000011648DDX189277.801Anas_platyrhynchos
ENSCSAVG00000004895-8679.437ENSACAG00000002045DDX187773.786Anolis_carolinensis
ENSCSAVG00000004895-9150.518ENSANAG00000034318-7349.304Aotus_nancymaae
ENSCSAVG00000004895-9556.890ENSANAG00000025869-7358.400Aotus_nancymaae
ENSCSAVG00000004895-9274.597ENSANAG00000037489-7572.994Aotus_nancymaae
ENSCSAVG00000004895-9174.338ENSANAG00000024417-7573.347Aotus_nancymaae
ENSCSAVG00000004895-9855.431ENSANAG00000026802-8554.982Aotus_nancymaae
ENSCSAVG00000004895-8680.349ENSACLG00000000352ddx188273.308Astatotilapia_calliptera
ENSCSAVG00000004895-7181.217ENSAMXG00000042612-9375.000Astyanax_mexicanus
ENSCSAVG00000004895-9775.097ENSAMXG00000024269ddx187175.097Astyanax_mexicanus
ENSCSAVG00000004895-9574.263ENSBTAG00000027319-7474.263Bos_taurus
ENSCSAVG00000004895-9574.263ENSBTAG00000015077-7674.263Bos_taurus
ENSCSAVG00000004895-8866.098WBGene00015232B0511.69262.745Caenorhabditis_elegans
ENSCSAVG00000004895-9374.354ENSCJAG00000021414DDX187672.553Callithrix_jacchus
ENSCSAVG00000004895-9574.269ENSCAFG00000004950DDX187674.269Canis_familiaris
ENSCSAVG00000004895-9572.125ENSCAFG00020014114DDX187672.125Canis_lupus_dingo
ENSCSAVG00000004895-9673.477ENSCHIG00000019280DDX187773.477Capra_hircus
ENSCSAVG00000004895-9375.149ENSTSYG00000002540DDX187575.149Carlito_syrichta
ENSCSAVG00000004895-8640.000ENSCAPG00000002364-5240.000Cavia_aperea
ENSCSAVG00000004895-8579.912ENSCAPG00000004039DDX187778.742Cavia_aperea
ENSCSAVG00000004895-8579.912ENSCPOG00000007532DDX187673.465Cavia_porcellus
ENSCSAVG00000004895-9255.263ENSCCAG00000028017-7855.263Cebus_capucinus
ENSCSAVG00000004895-9455.600ENSCCAG00000018129-9151.607Cebus_capucinus
ENSCSAVG00000004895-9772.937ENSCCAG00000023595-8379.393Cebus_capucinus
ENSCSAVG00000004895-9652.805ENSCATG00000033079-8152.805Cercocebus_atys
ENSCSAVG00000004895-9573.398ENSCATG00000036838DDX187772.467Cercocebus_atys
ENSCSAVG00000004895-9374.200ENSCLAG00000004684DDX187671.977Chinchilla_lanigera
ENSCSAVG00000004895-9573.684ENSCSAG00000016508DDX187772.745Chlorocebus_sabaeus
ENSCSAVG00000004895-7780.732ENSCHOG00000004191DDX186579.426Choloepus_hoffmanni
ENSCSAVG00000004895-9874.280ENSCPBG00000010529DDX187674.566Chrysemys_picta_bellii
ENSCSAVG00000004895-10084.452ENSCING00000022650-9085.159Ciona_intestinalis
ENSCSAVG00000004895-9555.186ENSCANG00000043728-8355.186Colobus_angolensis_palliatus
ENSCSAVG00000004895-9566.082ENSCANG00000019507-7565.259Colobus_angolensis_palliatus
ENSCSAVG00000004895-9573.489ENSCANG00000021885-7772.553Colobus_angolensis_palliatus
ENSCSAVG00000004895-9758.925ENSCANG00000028903-7658.925Colobus_angolensis_palliatus
ENSCSAVG00000004895-9075.876ENSCGRG00001010803-8171.617Cricetulus_griseus_chok1gshd
ENSCSAVG00000004895-9268.107ENSCGRG00001016185-7867.273Cricetulus_griseus_chok1gshd
ENSCSAVG00000004895-9268.107ENSCGRG00000013152-7867.273Cricetulus_griseus_crigri
ENSCSAVG00000004895-9075.876ENSCGRG00000008440-8171.617Cricetulus_griseus_crigri
ENSCSAVG00000004895-8779.176ENSCSEG00000015266ddx187872.128Cynoglossus_semilaevis
ENSCSAVG00000004895-8679.121ENSCVAG00000017936ddx187674.490Cyprinodon_variegatus
ENSCSAVG00000004895-9276.316ENSDARG00000030789ddx187576.316Danio_rerio
ENSCSAVG00000004895-7080.429ENSDNOG00000019096-7673.986Dasypus_novemcinctus
ENSCSAVG00000004895-6446.512ENSDNOG00000043539-6137.853Dasypus_novemcinctus
ENSCSAVG00000004895-8580.795ENSDORG00000011340Ddx188571.455Dipodomys_ordii
ENSCSAVG00000004895-8674.945FBgn0266581pit8364.071Drosophila_melanogaster
ENSCSAVG00000004895-6262.500ENSETEG00000017166-5162.500Echinops_telfairi
ENSCSAVG00000004895-6678.339ENSEBUG00000006265ddx187778.339Eptatretus_burgeri
ENSCSAVG00000004895-9573.489ENSECAG00000015740DDX187672.984Equus_caballus
ENSCSAVG00000004895-8779.393ENSEEUG00000000322DDX186979.393Erinaceus_europaeus
ENSCSAVG00000004895-8580.396ENSELUG00000008640ddx187373.819Esox_lucius
ENSCSAVG00000004895-9773.218ENSFCAG00000000753DDX187573.218Felis_catus
ENSCSAVG00000004895-9674.131ENSFALG00000013672DDX187873.988Ficedula_albicollis
ENSCSAVG00000004895-8643.573ENSFDAG00000018286-5243.573Fukomys_damarensis
ENSCSAVG00000004895-9274.950ENSFDAG00000014703DDX186773.964Fukomys_damarensis
ENSCSAVG00000004895-9075.726ENSGMOG00000007113ddx189274.797Gadus_morhua
ENSCSAVG00000004895-8681.538ENSGALG00000012147DDX187676.143Gallus_gallus
ENSCSAVG00000004895-8344.595ENSGALG00000017156DDX105044.595Gallus_gallus
ENSCSAVG00000004895-8778.091ENSGAFG00000019028ddx187878.091Gambusia_affinis
ENSCSAVG00000004895-9274.395ENSGACG00000001563ddx187879.258Gasterosteus_aculeatus
ENSCSAVG00000004895-9574.074ENSGGOG00000028420DDX187773.129Gorilla_gorilla
ENSCSAVG00000004895-9553.846ENSGGOG00000039210-7753.101Gorilla_gorilla
ENSCSAVG00000004895-9358.765ENSGGOG00000040382-7358.765Gorilla_gorilla
ENSCSAVG00000004895-8680.349ENSHBUG00000001204ddx187773.735Haplochromis_burtoni
ENSCSAVG00000004895-9064.887ENSHGLG00000005983-7664.887Heterocephalus_glaber_female
ENSCSAVG00000004895-8580.132ENSHGLG00000016324-7078.959Heterocephalus_glaber_female
ENSCSAVG00000004895-8580.132ENSHGLG00100001563DDX187078.959Heterocephalus_glaber_male
ENSCSAVG00000004895-9077.226ENSHCOG00000007568ddx187977.226Hippocampus_comes
ENSCSAVG00000004895-9075.975ENSSTOG00000010541DDX187674.949Ictidomys_tridecemlineatus
ENSCSAVG00000004895-8576.380ENSJJAG00000017042-7571.343Jaculus_jaculus
ENSCSAVG00000004895-8575.717ENSJJAG00000023769-7371.605Jaculus_jaculus
ENSCSAVG00000004895-8777.273ENSKMAG00000005975ddx188974.233Kryptolebias_marmoratus
ENSCSAVG00000004895-8680.131ENSLBEG00000027227ddx187873.981Labrus_bergylta
ENSCSAVG00000004895-8680.131ENSLBEG00000023115DDX187873.592Labrus_bergylta
ENSCSAVG00000004895-8680.131ENSLACG00000015308DDX188874.225Latimeria_chalumnae
ENSCSAVG00000004895-8779.393ENSLOCG00000003108ddx187574.451Lepisosteus_oculatus
ENSCSAVG00000004895-9871.839ENSLAFG00000006915DDX187473.123Loxodonta_africana
ENSCSAVG00000004895-9573.684ENSMFAG00000043075DDX187772.745Macaca_fascicularis
ENSCSAVG00000004895-9460.511ENSMFAG00000035685-7960.511Macaca_fascicularis
ENSCSAVG00000004895-9569.455ENSMMUG00000021343DDX187768.582Macaca_mulatta
ENSCSAVG00000004895-9559.100ENSMMUG00000029623-8158.674Macaca_mulatta
ENSCSAVG00000004895-9551.252ENSMNEG00000031049-7751.252Macaca_nemestrina
ENSCSAVG00000004895-9573.684ENSMNEG00000032172DDX187772.745Macaca_nemestrina
ENSCSAVG00000004895-8963.278ENSMLEG00000029597-8359.266Mandrillus_leucophaeus
ENSCSAVG00000004895-9573.684ENSMLEG00000038065DDX187772.745Mandrillus_leucophaeus
ENSCSAVG00000004895-8680.349ENSMAMG00000009100ddx188574.081Mastacembelus_armatus
ENSCSAVG00000004895-8680.349ENSMZEG00005013189ddx188273.308Maylandia_zebra
ENSCSAVG00000004895-9275.896ENSMGAG00000012345DDX188475.896Meleagris_gallopavo
ENSCSAVG00000004895-8644.662ENSMAUG00000009113-5244.662Mesocricetus_auratus
ENSCSAVG00000004895-9573.267ENSMAUG00000015244Ddx187673.267Mesocricetus_auratus
ENSCSAVG00000004895-9574.609ENSMICG00000047072-7673.654Microcebus_murinus
ENSCSAVG00000004895-7969.795ENSMICG00000027163-7866.213Microcebus_murinus
ENSCSAVG00000004895-9270.341ENSMOCG00000013664-7970.341Microtus_ochrogaster
ENSCSAVG00000004895-8573.068ENSMOCG00000012842-6873.536Microtus_ochrogaster
ENSCSAVG00000004895-9072.188ENSMOCG00000019953-8168.113Microtus_ochrogaster
ENSCSAVG00000004895-8777.922ENSMMOG00000019289ddx188777.922Mola_mola
ENSCSAVG00000004895-9772.816ENSMODG00000000533DDX188372.816Monodelphis_domestica
ENSCSAVG00000004895-9177.640ENSMALG00000008644ddx187975.050Monopterus_albus
ENSCSAVG00000004895-8579.249MGP_CAROLIEiJ_G0014529Ddx187971.238Mus_caroli
ENSCSAVG00000004895-8579.912ENSMUSG00000001674Ddx187078.959Mus_musculus
ENSCSAVG00000004895-8579.912MGP_PahariEiJ_G0027765Ddx187078.959Mus_pahari
ENSCSAVG00000004895-8579.601MGP_SPRETEiJ_G0015336Ddx187872.233Mus_spretus
ENSCSAVG00000004895-9573.735ENSMPUG00000000856-7673.684Mustela_putorius_furo
ENSCSAVG00000004895-8464.270ENSMPUG00000000414-10064.270Mustela_putorius_furo
ENSCSAVG00000004895-9175.764ENSMLUG00000017607DDX187375.764Myotis_lucifugus
ENSCSAVG00000004895-8578.308ENSNGAG00000005624Ddx187572.978Nannospalax_galili
ENSCSAVG00000004895-8864.059ENSNLEG00000027282-8359.693Nomascus_leucogenys
ENSCSAVG00000004895-9374.553ENSNLEG00000011769DDX187673.581Nomascus_leucogenys
ENSCSAVG00000004895-9455.906ENSNLEG00000032874-7955.906Nomascus_leucogenys
ENSCSAVG00000004895-8567.325ENSNLEG00000034294-6867.325Nomascus_leucogenys
ENSCSAVG00000004895-8962.319ENSNLEG00000034613-7662.319Nomascus_leucogenys
ENSCSAVG00000004895-8570.640ENSMEUG00000011419-6770.640Notamacropus_eugenii
ENSCSAVG00000004895-8580.795ENSOPRG00000001701DDX186880.795Ochotona_princeps
ENSCSAVG00000004895-8580.132ENSODEG00000007330DDX188071.103Octodon_degus
ENSCSAVG00000004895-8779.826ENSONIG00000007887ddx187873.828Oreochromis_niloticus
ENSCSAVG00000004895-9672.994ENSOCUG00000012586-7970.943Oryctolagus_cuniculus
ENSCSAVG00000004895-8852.146ENSOCUG00000023972-9252.146Oryctolagus_cuniculus
ENSCSAVG00000004895-8679.913ENSORLG00000008090ddx187874.556Oryzias_latipes
ENSCSAVG00000004895-8441.871ENSORLG00020006291-5441.871Oryzias_latipes_hni
ENSCSAVG00000004895-8680.131ENSORLG00020022308ddx187874.753Oryzias_latipes_hni
ENSCSAVG00000004895-8680.349ENSORLG00015023091ddx187875.197Oryzias_latipes_hsok
ENSCSAVG00000004895-8680.659ENSOMEG00000017773ddx187575.967Oryzias_melastigma
ENSCSAVG00000004895-8580.132ENSOGAG00000007237DDX187573.622Otolemur_garnettii
ENSCSAVG00000004895-9673.477ENSOARG00000012040DDX186773.477Ovis_aries
ENSCSAVG00000004895-7965.558ENSPPAG00000030501-6365.558Pan_paniscus
ENSCSAVG00000004895-9573.879ENSPPAG00000033473DDX187772.937Pan_paniscus
ENSCSAVG00000004895-9773.218ENSPPRG00000006406DDX187573.218Panthera_pardus
ENSCSAVG00000004895-9773.218ENSPTIG00000004868DDX187573.218Panthera_tigris_altaica
ENSCSAVG00000004895-9555.969ENSPTRG00000045036-7455.969Pan_troglodytes
ENSCSAVG00000004895-8563.576ENSPTRG00000047092-8157.253Pan_troglodytes
ENSCSAVG00000004895-9574.074ENSPTRG00000012391DDX187773.129Pan_troglodytes
ENSCSAVG00000004895-9460.904ENSPANG00000031669-7860.904Papio_anubis
ENSCSAVG00000004895-9573.346ENSPANG00000019899DDX187772.414Papio_anubis
ENSCSAVG00000004895-10071.563ENSPKIG00000001118ddx187871.563Paramormyrops_kingsleyae
ENSCSAVG00000004895-8679.780ENSPSIG00000002977DDX188671.483Pelodiscus_sinensis
ENSCSAVG00000004895-9276.025ENSPMGG00000007162ddx188374.213Periophthalmus_magnuspinnatus
ENSCSAVG00000004895-9276.132ENSPEMG00000010438-7575.152Peromyscus_maniculatus_bairdii
ENSCSAVG00000004895-7774.163ENSPMAG00000009147ddx187674.171Petromyzon_marinus
ENSCSAVG00000004895-9673.674ENSPCIG00000029015DDX187873.674Phascolarctos_cinereus
ENSCSAVG00000004895-8678.901ENSPFOG00000000969ddx187775.258Poecilia_formosa
ENSCSAVG00000004895-9273.878ENSPLAG00000005210ddx189273.878Poecilia_latipinna
ENSCSAVG00000004895-8678.901ENSPMEG00000014773ddx187775.258Poecilia_mexicana
ENSCSAVG00000004895-9473.819ENSPPYG00000012796DDX188173.819Pongo_abelii
ENSCSAVG00000004895-6680.000ENSPCAG00000010274DDX185280.000Procavia_capensis
ENSCSAVG00000004895-9673.922ENSPCOG00000016210DDX187473.152Propithecus_coquereli
ENSCSAVG00000004895-9573.099ENSPVAG00000006823DDX187673.099Pteropus_vampyrus
ENSCSAVG00000004895-8680.131ENSPNYG00000016437ddx187773.541Pundamilia_nyererei
ENSCSAVG00000004895-8680.568ENSPNAG00000024239ddx187674.753Pygocentrus_nattereri
ENSCSAVG00000004895-8579.912ENSRNOG00000025430Ddx187771.727Rattus_norvegicus
ENSCSAVG00000004895-8953.750ENSRBIG00000033443-7651.267Rhinopithecus_bieti
ENSCSAVG00000004895-9375.610ENSRBIG00000036313DDX187772.973Rhinopithecus_bieti
ENSCSAVG00000004895-6466.372ENSRBIG00000038208-5566.372Rhinopithecus_bieti
ENSCSAVG00000004895-6463.422ENSRROG00000030803-5463.422Rhinopithecus_roxellana
ENSCSAVG00000004895-9375.610ENSRROG00000007370DDX187772.973Rhinopithecus_roxellana
ENSCSAVG00000004895-8564.967YMR290C-8964.967Saccharomyces_cerevisiae
ENSCSAVG00000004895-9461.200ENSSBOG00000035646-7561.200Saimiri_boliviensis_boliviensis
ENSCSAVG00000004895-8365.682ENSSBOG00000034289-7965.682Saimiri_boliviensis_boliviensis
ENSCSAVG00000004895-9373.715ENSSHAG00000018781DDX187973.715Sarcophilus_harrisii
ENSCSAVG00000004895-8680.440ENSSFOG00015022557ddx187075.911Scleropages_formosus
ENSCSAVG00000004895-8679.780ENSSMAG00000001652ddx187571.970Scophthalmus_maximus
ENSCSAVG00000004895-8680.440ENSSDUG00000005957ddx187672.275Seriola_dumerili
ENSCSAVG00000004895-8680.440ENSSLDG00000003692ddx189371.780Seriola_lalandi_dorsalis
ENSCSAVG00000004895-8779.610ENSSARG00000005248DDX189279.610Sorex_araneus
ENSCSAVG00000004895-9076.653ENSSPUG00000016098DDX187476.971Sphenodon_punctatus
ENSCSAVG00000004895-8680.786ENSSPAG00000023389ddx187972.316Stegastes_partitus
ENSCSAVG00000004895-9573.837ENSSSCG00000015712DDX186573.837Sus_scrofa
ENSCSAVG00000004895-8544.493ENSSSCG00000015011-5544.493Sus_scrofa
ENSCSAVG00000004895-8680.879ENSTGUG00000011611DDX189275.649Taeniopygia_guttata
ENSCSAVG00000004895-9573.518ENSTRUG00000005649ddx187873.518Takifugu_rubripes
ENSCSAVG00000004895-8680.131ENSTNIG00000017834ddx188280.131Tetraodon_nigroviridis
ENSCSAVG00000004895-9163.843ENSTBEG00000016543DDX188061.538Tupaia_belangeri
ENSCSAVG00000004895-9572.921ENSTTRG00000015218DDX187672.921Tursiops_truncatus
ENSCSAVG00000004895-9673.870ENSUAMG00000016457DDX187381.015Ursus_americanus
ENSCSAVG00000004895-9573.684ENSUMAG00000013505DDX187673.684Ursus_maritimus
ENSCSAVG00000004895-5379.433ENSVPAG00000004214-5679.433Vicugna_pacos
ENSCSAVG00000004895-8673.187ENSXCOG00000015361ddx189469.022Xiphophorus_couchianus
ENSCSAVG00000004895-8678.901ENSXMAG00000018003ddx188371.319Xiphophorus_maculatus

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