EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000004925 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
7423 bases
Position
chrreftig_194:130627-138049
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000008274GTP_EFTUPF00009.271.1e-0711
ENSCSAVP00000008275GTP_EFTUPF00009.272e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000008383-967-ENSCSAVP00000008275301 (aa)-H2YSG5
ENSCSAVT00000008382-939-ENSCSAVP00000008274309 (aa)-H2YSG4
Gene Model
Click here to download ENSCSAVG00000004925's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004925's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000004925-9565.614ENSG00000198522GPN16876.000Homo_sapiens
ENSCSAVG00000004925-8569.141ENSAMEG00000001201GPN17068.382Ailuropoda_melanoleuca
ENSCSAVG00000004925-9164.234ENSAPEG00000000067gpn17167.433Amphiprion_percula
ENSCSAVG00000004925-9564.561ENSAPEG00000000050gpn16967.647Amphiprion_percula
ENSCSAVG00000004925-9862.583ENSATEG00000015542gpn17467.647Anabas_testudineus
ENSCSAVG00000004925-9164.493ENSAPLG00000003530GPN17567.681Anas_platyrhynchos
ENSCSAVG00000004925-8861.798ENSACAG00000008974GPN17464.961Anolis_carolinensis
ENSCSAVG00000004925-9564.912ENSANAG00000024716GPN17068.015Aotus_nancymaae
ENSCSAVG00000004925-9565.263ENSACLG00000025644gpn16968.382Astatotilapia_calliptera
ENSCSAVG00000004925-9963.667ENSAMXG00000031098gpn17166.207Astyanax_mexicanus
ENSCSAVG00000004925-9459.655WBGene00001661gop-27961.429Caenorhabditis_elegans
ENSCSAVG00000004925-9565.263ENSCJAG00000046633GPN17068.382Callithrix_jacchus
ENSCSAVG00000004925-5866.667ENSCAFG00000032406-8566.120Canis_familiaris
ENSCSAVG00000004925-9565.263ENSCAFG00000005160-7068.382Canis_familiaris
ENSCSAVG00000004925-6263.978ENSCAFG00000024379-7063.212Canis_familiaris
ENSCSAVG00000004925-9565.614ENSCAFG00020020326-7368.750Canis_lupus_dingo
ENSCSAVG00000004925-9565.614ENSCAFG00020022034-8565.836Canis_lupus_dingo
ENSCSAVG00000004925-8566.016ENSCHIG00000017789-7268.462Capra_hircus
ENSCSAVG00000004925-9564.236ENSTSYG00000006604GPN17367.273Carlito_syrichta
ENSCSAVG00000004925-7461.161ENSCAPG00000015026GPN16564.929Cavia_aperea
ENSCSAVG00000004925-9563.636ENSCPOG00000004359GPN17766.202Cavia_porcellus
ENSCSAVG00000004925-9565.263ENSCCAG00000035409GPN17068.382Cebus_capucinus
ENSCSAVG00000004925-9565.263ENSCATG00000042260GPN17068.382Cercocebus_atys
ENSCSAVG00000004925-9962.752ENSCLAG00000008226GPN17565.614Chinchilla_lanigera
ENSCSAVG00000004925-9565.263ENSCSAG00000010222GPN17068.382Chlorocebus_sabaeus
ENSCSAVG00000004925-9465.035ENSCPBG00000009367GPN17765.411Chrysemys_picta_bellii
ENSCSAVG00000004925-9683.849ENSCING00000023847-8787.770Ciona_intestinalis
ENSCSAVG00000004925-9565.263ENSCANG00000031249GPN17068.382Colobus_angolensis_palliatus
ENSCSAVG00000004925-8668.605ENSCGRG00001017621Gpn17070.992Cricetulus_griseus_chok1gshd
ENSCSAVG00000004925-8668.605ENSCGRG00000003560Gpn17070.992Cricetulus_griseus_crigri
ENSCSAVG00000004925-9462.324ENSCSEG00000019468gpn16865.314Cynoglossus_semilaevis
ENSCSAVG00000004925-9564.912ENSDARG00000043928gpn16868.015Danio_rerio
ENSCSAVG00000004925-9465.035ENSDORG00000006558Gpn17268.132Dipodomys_ordii
ENSCSAVG00000004925-9255.000FBgn0040346CG37046957.678Drosophila_melanogaster
ENSCSAVG00000004925-9465.248ENSEASG00005009082GPN17268.401Equus_asinus_asinus
ENSCSAVG00000004925-9562.105ENSECAG00000009579GPN17465.672Equus_caballus
ENSCSAVG00000004925-8568.359ENSEEUG00000013421GPN16970.769Erinaceus_europaeus
ENSCSAVG00000004925-9764.548ENSELUG00000006293gpn17464.548Esox_lucius
ENSCSAVG00000004925-8564.981ENSFCAG00000030425GPN17464.469Felis_catus
ENSCSAVG00000004925-8763.636ENSFALG00000011331GPN17466.932Ficedula_albicollis
ENSCSAVG00000004925-9863.072ENSFDAG00000014526GPN17865.870Fukomys_damarensis
ENSCSAVG00000004925-9467.845ENSGMOG00000016174gpn17770.741Gadus_morhua
ENSCSAVG00000004925-9565.035ENSGALG00000016505GPN17468.132Gallus_gallus
ENSCSAVG00000004925-9765.217ENSGAFG00000016670gpn16265.217Gambusia_affinis
ENSCSAVG00000004925-9564.912ENSGACG00000017639gpn18068.015Gasterosteus_aculeatus
ENSCSAVG00000004925-9464.685ENSGAGG00000016449GPN17367.766Gopherus_agassizii
ENSCSAVG00000004925-9565.614ENSGGOG00000015285GPN17068.750Gorilla_gorilla
ENSCSAVG00000004925-9565.614ENSHBUG00000022933gpn17468.750Haplochromis_burtoni
ENSCSAVG00000004925-9563.300ENSHGLG00000010319GPN17666.197Heterocephalus_glaber_female
ENSCSAVG00000004925-9563.300ENSHGLG00100016905GPN17666.197Heterocephalus_glaber_male
ENSCSAVG00000004925-9564.912ENSIPUG00000011938gpn16868.015Ictalurus_punctatus
ENSCSAVG00000004925-9963.545ENSSTOG00000006379-7865.636Ictidomys_tridecemlineatus
ENSCSAVG00000004925-9861.149ENSKMAG00000011063gpn17263.958Kryptolebias_marmoratus
ENSCSAVG00000004925-8066.529ENSLACG00000001268GPN19970.306Latimeria_chalumnae
ENSCSAVG00000004925-9565.965ENSLOCG00000015949gpn18762.460Lepisosteus_oculatus
ENSCSAVG00000004925-9465.248ENSLAFG00000011179GPN17268.148Loxodonta_africana
ENSCSAVG00000004925-9565.263ENSMFAG00000035863GPN17068.382Macaca_fascicularis
ENSCSAVG00000004925-9565.263ENSMMUG00000019745GPN17068.382Macaca_mulatta
ENSCSAVG00000004925-9565.263ENSMNEG00000027876GPN17068.382Macaca_nemestrina
ENSCSAVG00000004925-8568.750ENSMLEG00000031376GPN17371.154Mandrillus_leucophaeus
ENSCSAVG00000004925-9565.263ENSMZEG00005003265gpn16968.382Maylandia_zebra
ENSCSAVG00000004925-7067.925ENSMGAG00000014062GPN17267.686Meleagris_gallopavo
ENSCSAVG00000004925-8668.992ENSMAUG00000018225Gpn17171.374Mesocricetus_auratus
ENSCSAVG00000004925-8569.141ENSMICG00000042626GPN17368.382Microcebus_murinus
ENSCSAVG00000004925-8668.605ENSMOCG00000021769Gpn17070.992Microtus_ochrogaster
ENSCSAVG00000004925-9563.415ENSMMOG00000002005gpn15566.912Mola_mola
ENSCSAVG00000004925-8467.194ENSMODG00000015592GPN16969.231Monodelphis_domestica
ENSCSAVG00000004925-9962.752ENSMALG00000015121gpn16665.278Monopterus_albus
ENSCSAVG00000004925-9564.912MGP_CAROLIEiJ_G0027095Gpn17368.015Mus_caroli
ENSCSAVG00000004925-9564.912ENSMUSG00000064037Gpn17368.015Mus_musculus
ENSCSAVG00000004925-9564.912MGP_PahariEiJ_G0029286Gpn17668.015Mus_pahari
ENSCSAVG00000004925-9564.211MGP_SPRETEiJ_G0028091Gpn17367.279Mus_spretus
ENSCSAVG00000004925-9564.561ENSMLUG00000011928GPN17167.647Myotis_lucifugus
ENSCSAVG00000004925-9565.614ENSNLEG00000003945GPN17368.750Nomascus_leucogenys
ENSCSAVG00000004925-8568.359ENSOPRG00000013015GPN17367.647Ochotona_princeps
ENSCSAVG00000004925-8966.171ENSODEG00000007092GPN17765.292Octodon_degus
ENSCSAVG00000004925-9564.912ENSONIG00000003361gpn16968.015Oreochromis_niloticus
ENSCSAVG00000004925-9863.851ENSORLG00020015676gpn17568.340Oryzias_latipes_hni
ENSCSAVG00000004925-9864.189ENSORLG00015013049gpn17068.750Oryzias_latipes_hsok
ENSCSAVG00000004925-9864.527ENSOMEG00000022023gpn17367.491Oryzias_melastigma
ENSCSAVG00000004925-9565.263ENSOGAG00000014057GPN17668.382Otolemur_garnettii
ENSCSAVG00000004925-9565.614ENSPPAG00000022926GPN17068.750Pan_paniscus
ENSCSAVG00000004925-8568.750ENSPPRG00000001472GPN17464.469Panthera_pardus
ENSCSAVG00000004925-8966.543ENSPTIG00000007504GPN17464.469Panthera_tigris_altaica
ENSCSAVG00000004925-9664.483ENSPTRG00000011776GPN17068.750Pan_troglodytes
ENSCSAVG00000004925-9565.263ENSPANG00000011578GPN17068.382Papio_anubis
ENSCSAVG00000004925-9565.965ENSPKIG00000007460gpn16869.118Paramormyrops_kingsleyae
ENSCSAVG00000004925-9365.972ENSPMGG00000013238gpn17765.972Periophthalmus_magnuspinnatus
ENSCSAVG00000004925-8668.605ENSPEMG00000003913Gpn17070.992Peromyscus_maniculatus_bairdii
ENSCSAVG00000004925-9464.211ENSPCIG00000026182GPN17366.547Phascolarctos_cinereus
ENSCSAVG00000004925-9765.000ENSPFOG00000000034gpn17665.000Poecilia_formosa
ENSCSAVG00000004925-9764.846ENSPLAG00000023798gpn17664.667Poecilia_latipinna
ENSCSAVG00000004925-9765.000ENSPMEG00000002283gpn18065.203Poecilia_mexicana
ENSCSAVG00000004925-9764.846ENSPREG00000009028gpn17568.627Poecilia_reticulata
ENSCSAVG00000004925-9465.845ENSPPYG00000012538GPN18169.004Pongo_abelii
ENSCSAVG00000004925-9565.614ENSPCOG00000028038GPN17368.750Propithecus_coquereli
ENSCSAVG00000004925-9563.158ENSPVAG00000015220GPN17966.176Pteropus_vampyrus
ENSCSAVG00000004925-9565.263ENSPNYG00000019130gpn16968.382Pundamilia_nyererei
ENSCSAVG00000004925-9863.636ENSPNAG00000010900gpn16966.549Pygocentrus_nattereri
ENSCSAVG00000004925-9067.491ENSRNOG00000004941Gpn17667.491Rattus_norvegicus
ENSCSAVG00000004925-9565.263ENSRBIG00000038211GPN17068.382Rhinopithecus_bieti
ENSCSAVG00000004925-9565.263ENSRROG00000026146GPN17368.382Rhinopithecus_roxellana
ENSCSAVG00000004925-9452.901YJR072CNPA37255.357Saccharomyces_cerevisiae
ENSCSAVG00000004925-9565.263ENSSBOG00000025586GPN17168.321Saimiri_boliviensis_boliviensis
ENSCSAVG00000004925-9863.514ENSSFOG00015019441gpn16868.750Scleropages_formosus
ENSCSAVG00000004925-9862.252ENSSMAG00000005973gpn16867.647Scophthalmus_maximus
ENSCSAVG00000004925-9762.791ENSSDUG00000006929gpn17167.279Seriola_dumerili
ENSCSAVG00000004925-9762.791ENSSLDG00000014532gpn17462.791Seriola_lalandi_dorsalis
ENSCSAVG00000004925-9564.211ENSSPAG00000015690gpn17167.279Stegastes_partitus
ENSCSAVG00000004925-9565.614ENSSSCG00000008546GPN16775.113Sus_scrofa
ENSCSAVG00000004925-9464.336ENSTGUG00000014626GPN17865.836Taeniopygia_guttata
ENSCSAVG00000004925-9565.965ENSTRUG00000004290gpn16869.118Takifugu_rubripes
ENSCSAVG00000004925-9564.912ENSTNIG00000002572gpn17367.766Tetraodon_nigroviridis
ENSCSAVG00000004925-9564.561ENSTBEG00000007425GPN17367.647Tupaia_belangeri
ENSCSAVG00000004925-8667.054ENSTTRG00000012531GPN17366.058Tursiops_truncatus
ENSCSAVG00000004925-7162.791ENSUAMG00000012406-9066.832Ursus_americanus
ENSCSAVG00000004925-9564.912ENSUMAG00000020247GPN16468.015Ursus_maritimus
ENSCSAVG00000004925-9764.846ENSXMAG00000005436gpn16864.667Xiphophorus_maculatus

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