EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004927 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4468 bases
Position: chrreftig_978:162967-167434
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008277	Slu7	PF11708.8	1.1e-90	1	1
ENSCSAVP00000008278	Slu7	PF11708.8	3.4e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008386	-	932	-	ENSCSAVP00000008278	292 (aa)	-	H2YSG8
ENSCSAVT00000008385	-	1245	-	ENSCSAVP00000008277	414 (aa)	-	H2YSG7

Gene Model

Click here to download ENSCSAVG00000004927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004927's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004927	-	100	54.567	ENSG00000164609	SLU7	70	53.052	Homo_sapiens
ENSCSAVG00000004927	-	100	53.846	ENSAPOG00000011660	slu7	70	53.176	Acanthochromis_polyacanthus
ENSCSAVG00000004927	-	100	53.477	ENSAMEG00000006613	SLU7	70	52.668	Ailuropoda_melanoleuca
ENSCSAVG00000004927	-	100	54.348	ENSACIG00000005652	slu7	65	54.964	Amphilophus_citrinellus
ENSCSAVG00000004927	-	75	72.603	ENSAPEG00000018095	slu7	70	53.647	Amphiprion_percula
ENSCSAVG00000004927	-	100	53.976	ENSATEG00000006357	slu7	71	54.964	Anabas_testudineus
ENSCSAVG00000004927	-	100	52.668	ENSAPLG00000008133	SLU7	71	54.087	Anas_platyrhynchos
ENSCSAVG00000004927	-	100	55.396	ENSACAG00000003144	SLU7	71	54.930	Anolis_carolinensis
ENSCSAVG00000004927	-	100	54.327	ENSANAG00000028320	SLU7	70	52.582	Aotus_nancymaae
ENSCSAVG00000004927	-	100	51.613	ENSACLG00000007273	slu7	71	52.174	Astatotilapia_calliptera
ENSCSAVG00000004927	-	100	54.217	ENSAMXG00000002404	slu7	70	54.458	Astyanax_mexicanus
ENSCSAVG00000004927	-	100	54.567	ENSBTAG00000008457	SLU7	70	52.582	Bos_taurus
ENSCSAVG00000004927	-	76	56.000	WBGene00010629	K07C5.6	65	39.318	Caenorhabditis_elegans
ENSCSAVG00000004927	-	100	53.976	ENSCJAG00000019132	SLU7	70	52.471	Callithrix_jacchus
ENSCSAVG00000004927	-	100	54.327	ENSCAFG00000017268	SLU7	65	52.817	Canis_familiaris
ENSCSAVG00000004927	-	100	54.327	ENSCAFG00020001456	SLU7	65	52.817	Canis_lupus_dingo
ENSCSAVG00000004927	-	100	54.567	ENSCHIG00000013793	SLU7	70	52.830	Capra_hircus
ENSCSAVG00000004927	-	100	54.087	ENSTSYG00000000157	SLU7	70	54.348	Carlito_syrichta
ENSCSAVG00000004927	-	100	50.356	ENSCAPG00000015711	SLU7	69	49.296	Cavia_aperea
ENSCSAVG00000004927	-	100	54.869	ENSCPOG00000004484	SLU7	70	53.756	Cavia_porcellus
ENSCSAVG00000004927	-	100	54.699	ENSCCAG00000035808	SLU7	70	52.941	Cebus_capucinus
ENSCSAVG00000004927	-	100	54.087	ENSCATG00000026140	SLU7	70	52.817	Cercocebus_atys
ENSCSAVG00000004927	-	100	54.869	ENSCLAG00000011915	SLU7	70	53.991	Chinchilla_lanigera
ENSCSAVG00000004927	-	77	70.354	ENSCSAG00000010383	SLU7	60	60.959	Chlorocebus_sabaeus
ENSCSAVG00000004927	-	100	53.846	ENSCHOG00000005055	SLU7	70	54.589	Choloepus_hoffmanni
ENSCSAVG00000004927	-	100	54.739	ENSCPBG00000008047	SLU7	70	54.098	Chrysemys_picta_bellii
ENSCSAVG00000004927	-	91	79.044	ENSCING00000008595	zf(cchc)-12	54	72.930	Ciona_intestinalis
ENSCSAVG00000004927	-	100	54.327	ENSCANG00000003257	SLU7	70	52.817	Colobus_angolensis_palliatus
ENSCSAVG00000004927	-	68	64.824	ENSCGRG00001022223	-	64	56.855	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004927	-	100	53.717	ENSCGRG00001016416	Slu7	70	52.817	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004927	-	100	53.717	ENSCGRG00000005164	Slu7	70	52.436	Cricetulus_griseus_crigri
ENSCSAVG00000004927	-	68	64.824	ENSCGRG00000008655	-	64	56.855	Cricetulus_griseus_crigri
ENSCSAVG00000004927	-	99	53.140	ENSCSEG00000015522	slu7	71	52.899	Cynoglossus_semilaevis
ENSCSAVG00000004927	-	100	52.163	ENSCVAG00000019302	slu7	70	53.511	Cyprinodon_variegatus
ENSCSAVG00000004927	-	100	52.969	ENSDARG00000038870	slu7	91	41.758	Danio_rerio
ENSCSAVG00000004927	-	100	54.087	ENSDNOG00000048745	SLU7	70	54.831	Dasypus_novemcinctus
ENSCSAVG00000004927	-	83	59.091	ENSDORG00000025365	-	68	45.758	Dipodomys_ordii
ENSCSAVG00000004927	-	99	46.988	ENSDORG00000006239	-	64	56.429	Dipodomys_ordii
ENSCSAVG00000004927	-	75	66.818	FBgn0039626	Slu7	70	47.086	Drosophila_melanogaster
ENSCSAVG00000004927	-	79	51.724	ENSETEG00000002993	-	68	46.367	Echinops_telfairi
ENSCSAVG00000004927	-	100	54.087	ENSETEG00000014798	-	78	52.817	Echinops_telfairi
ENSCSAVG00000004927	-	100	52.530	ENSEBUG00000003656	slu7	63	51.643	Eptatretus_burgeri
ENSCSAVG00000004927	-	100	53.846	ENSEASG00005000613	SLU7	71	53.521	Equus_asinus_asinus
ENSCSAVG00000004927	-	100	53.606	ENSECAG00000013696	SLU7	70	53.521	Equus_caballus
ENSCSAVG00000004927	-	76	67.713	ENSELUG00000022607	slu7	70	52.000	Esox_lucius
ENSCSAVG00000004927	-	100	54.327	ENSFCAG00000011152	SLU7	70	53.052	Felis_catus
ENSCSAVG00000004927	-	100	55.904	ENSFALG00000013473	-	71	56.174	Ficedula_albicollis
ENSCSAVG00000004927	-	56	67.665	ENSFALG00000014860	-	57	57.391	Ficedula_albicollis
ENSCSAVG00000004927	-	100	54.524	ENSFDAG00000003906	SLU7	70	53.756	Fukomys_damarensis
ENSCSAVG00000004927	-	100	53.444	ENSFHEG00000012789	slu7	71	52.927	Fundulus_heteroclitus
ENSCSAVG00000004927	-	99	50.485	ENSGMOG00000016207	slu7	69	50.728	Gadus_morhua
ENSCSAVG00000004927	-	100	55.663	ENSGALG00000034414	SLU7	61	53.738	Gallus_gallus
ENSCSAVG00000004927	-	75	71.233	ENSGAFG00000007953	slu7	70	52.706	Gambusia_affinis
ENSCSAVG00000004927	-	100	49.880	ENSGACG00000018144	slu7	71	49.760	Gasterosteus_aculeatus
ENSCSAVG00000004927	-	100	54.739	ENSGAGG00000008256	SLU7	70	54.098	Gopherus_agassizii
ENSCSAVG00000004927	-	100	54.699	ENSGGOG00000005591	SLU7	70	53.176	Gorilla_gorilla
ENSCSAVG00000004927	-	84	65.737	ENSHBUG00000002296	slu7	62	62.324	Haplochromis_burtoni
ENSCSAVG00000004927	-	100	54.762	ENSHGLG00000009442	-	70	53.991	Heterocephalus_glaber_female
ENSCSAVG00000004927	-	77	65.929	ENSHGLG00000008195	-	59	57.192	Heterocephalus_glaber_female
ENSCSAVG00000004927	-	100	54.762	ENSHGLG00100008080	-	70	53.991	Heterocephalus_glaber_male
ENSCSAVG00000004927	-	100	52.644	ENSHCOG00000003110	slu7	70	52.998	Hippocampus_comes
ENSCSAVG00000004927	-	100	55.181	ENSIPUG00000017949	slu7	71	53.286	Ictalurus_punctatus
ENSCSAVG00000004927	-	100	52.632	ENSSTOG00000015057	SLU7	85	51.636	Ictidomys_tridecemlineatus
ENSCSAVG00000004927	-	100	53.810	ENSJJAG00000011452	Slu7	70	53.052	Jaculus_jaculus
ENSCSAVG00000004927	-	100	53.253	ENSKMAG00000005625	slu7	70	52.471	Kryptolebias_marmoratus
ENSCSAVG00000004927	-	100	52.771	ENSLBEG00000004903	slu7	71	52.000	Labrus_bergylta
ENSCSAVG00000004927	-	100	52.844	ENSLACG00000010170	SLU7	71	51.852	Latimeria_chalumnae
ENSCSAVG00000004927	-	100	53.846	ENSLOCG00000009410	slu7	72	52.817	Lepisosteus_oculatus
ENSCSAVG00000004927	-	100	54.327	ENSLAFG00000003725	SLU7	71	53.037	Loxodonta_africana
ENSCSAVG00000004927	-	100	54.327	ENSMFAG00000002001	SLU7	70	52.817	Macaca_fascicularis
ENSCSAVG00000004927	-	100	54.589	ENSMMUG00000023075	SLU7	70	53.066	Macaca_mulatta
ENSCSAVG00000004927	-	100	54.567	ENSMNEG00000029132	SLU7	70	53.052	Macaca_nemestrina
ENSCSAVG00000004927	-	100	54.087	ENSMLEG00000037647	SLU7	70	52.817	Mandrillus_leucophaeus
ENSCSAVG00000004927	-	100	52.267	ENSMAMG00000008387	slu7	71	52.000	Mastacembelus_armatus
ENSCSAVG00000004927	-	100	53.735	ENSMZEG00005012180	slu7	70	54.126	Maylandia_zebra
ENSCSAVG00000004927	-	100	55.663	ENSMGAG00000002882	SLU7	70	55.932	Meleagris_gallopavo
ENSCSAVG00000004927	-	100	54.067	ENSMAUG00000016739	Slu7	70	53.052	Mesocricetus_auratus
ENSCSAVG00000004927	-	100	54.087	ENSMICG00000031781	SLU7	70	52.582	Microcebus_murinus
ENSCSAVG00000004927	-	100	53.957	ENSMOCG00000012963	Slu7	70	53.052	Microtus_ochrogaster
ENSCSAVG00000004927	-	100	52.289	ENSMMOG00000004203	slu7	70	53.494	Mola_mola
ENSCSAVG00000004927	-	77	41.718	ENSMMOG00000005988	-	60	44.444	Mola_mola
ENSCSAVG00000004927	-	100	54.374	ENSMODG00000007968	SLU7	67	54.460	Monodelphis_domestica
ENSCSAVG00000004927	-	99	54.237	ENSMALG00000004247	slu7	71	54.964	Monopterus_albus
ENSCSAVG00000004927	-	100	53.957	MGP_CAROLIEiJ_G0016222	Slu7	70	52.668	Mus_caroli
ENSCSAVG00000004927	-	100	54.197	ENSMUSG00000020409	Slu7	66	57.362	Mus_musculus
ENSCSAVG00000004927	-	100	53.957	MGP_PahariEiJ_G0017358	Slu7	70	53.052	Mus_pahari
ENSCSAVG00000004927	-	100	53.957	MGP_SPRETEiJ_G0017063	Slu7	70	52.668	Mus_spretus
ENSCSAVG00000004927	-	100	53.957	ENSMPUG00000013264	SLU7	65	52.817	Mustela_putorius_furo
ENSCSAVG00000004927	-	100	53.333	ENSMLUG00000003091	SLU7	70	52.817	Myotis_lucifugus
ENSCSAVG00000004927	-	100	53.606	ENSNGAG00000015167	Slu7	70	52.436	Nannospalax_galili
ENSCSAVG00000004927	-	100	54.458	ENSNLEG00000004355	SLU7	70	52.941	Nomascus_leucogenys
ENSCSAVG00000004927	-	77	70.796	ENSMEUG00000010577	SLU7	60	61.301	Notamacropus_eugenii
ENSCSAVG00000004927	-	100	50.591	ENSOPRG00000004538	SLU7	59	60.690	Ochotona_princeps
ENSCSAVG00000004927	-	100	48.077	ENSODEG00000005892	-	69	48.193	Octodon_degus
ENSCSAVG00000004927	-	100	54.286	ENSODEG00000010998	-	70	53.991	Octodon_degus
ENSCSAVG00000004927	-	100	53.976	ENSONIG00000012957	slu7	71	52.941	Oreochromis_niloticus
ENSCSAVG00000004927	-	77	70.796	ENSOANG00000012329	-	89	58.333	Ornithorhynchus_anatinus
ENSCSAVG00000004927	-	100	52.404	ENSOCUG00000011743	SLU7	70	51.282	Oryctolagus_cuniculus
ENSCSAVG00000004927	-	99	54.964	ENSORLG00000005505	slu7	69	55.797	Oryzias_latipes
ENSCSAVG00000004927	-	99	54.964	ENSORLG00020011665	slu7	70	55.797	Oryzias_latipes_hni
ENSCSAVG00000004927	-	99	54.964	ENSORLG00015002040	slu7	70	55.797	Oryzias_latipes_hsok
ENSCSAVG00000004927	-	100	54.699	ENSOMEG00000006235	slu7	70	54.699	Oryzias_melastigma
ENSCSAVG00000004927	-	100	54.808	ENSOGAG00000012301	SLU7	70	53.052	Otolemur_garnettii
ENSCSAVG00000004927	-	100	53.846	ENSOARG00000013468	SLU7	70	52.113	Ovis_aries
ENSCSAVG00000004927	-	100	54.699	ENSPPAG00000032717	SLU7	70	53.176	Pan_paniscus
ENSCSAVG00000004927	-	100	54.327	ENSPPRG00000013856	SLU7	70	53.052	Panthera_pardus
ENSCSAVG00000004927	-	100	54.327	ENSPTIG00000005434	SLU7	70	53.052	Panthera_tigris_altaica
ENSCSAVG00000004927	-	100	54.458	ENSPTRG00000017491	SLU7	70	52.941	Pan_troglodytes
ENSCSAVG00000004927	-	100	52.844	ENSPANG00000006850	SLU7	70	52.817	Papio_anubis
ENSCSAVG00000004927	-	100	52.471	ENSPKIG00000009367	slu7	71	52.019	Paramormyrops_kingsleyae
ENSCSAVG00000004927	-	100	52.817	ENSPSIG00000011216	SLU7	70	52.436	Pelodiscus_sinensis
ENSCSAVG00000004927	-	100	52.415	ENSPMGG00000015695	slu7	68	52.415	Periophthalmus_magnuspinnatus
ENSCSAVG00000004927	-	100	41.106	ENSPEMG00000000564	-	69	41.527	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004927	-	100	53.846	ENSPEMG00000016646	-	70	52.668	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004927	-	100	54.808	ENSPCIG00000018111	SLU7	70	54.831	Phascolarctos_cinereus
ENSCSAVG00000004927	-	100	53.125	ENSPFOG00000009050	slu7	71	52.459	Poecilia_formosa
ENSCSAVG00000004927	-	100	53.237	ENSPLAG00000005330	slu7	71	52.103	Poecilia_latipinna
ENSCSAVG00000004927	-	100	53.125	ENSPMEG00000024369	slu7	70	53.976	Poecilia_mexicana
ENSCSAVG00000004927	-	75	71.689	ENSPREG00000004355	slu7	70	52.969	Poecilia_reticulata
ENSCSAVG00000004927	-	100	54.567	ENSPPYG00000016008	SLU7	70	53.052	Pongo_abelii
ENSCSAVG00000004927	-	77	70.796	ENSPCAG00000003323	SLU7	54	70.796	Procavia_capensis
ENSCSAVG00000004927	-	77	70.354	ENSPCOG00000016138	SLU7	70	50.236	Propithecus_coquereli
ENSCSAVG00000004927	-	77	69.469	ENSPVAG00000015935	SLU7	59	56.944	Pteropus_vampyrus
ENSCSAVG00000004927	-	100	52.899	ENSPNYG00000000289	slu7	70	54.126	Pundamilia_nyererei
ENSCSAVG00000004927	-	100	51.923	ENSPNYG00000024087	-	78	52.235	Pundamilia_nyererei
ENSCSAVG00000004927	-	100	54.436	ENSPNAG00000006885	slu7	71	54.916	Pygocentrus_nattereri
ENSCSAVG00000004927	-	100	54.306	ENSRNOG00000003822	Slu7	70	53.052	Rattus_norvegicus
ENSCSAVG00000004927	-	100	54.306	ENSRBIG00000021391	SLU7	70	53.606	Rhinopithecus_bieti
ENSCSAVG00000004927	-	100	54.327	ENSRROG00000008930	SLU7	70	52.817	Rhinopithecus_roxellana
ENSCSAVG00000004927	-	100	54.458	ENSSBOG00000003225	SLU7	70	52.706	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004927	-	100	54.327	ENSSHAG00000009841	-	70	53.286	Sarcophilus_harrisii
ENSCSAVG00000004927	-	100	52.038	ENSSHAG00000007807	-	70	50.351	Sarcophilus_harrisii
ENSCSAVG00000004927	-	100	54.137	ENSSFOG00015015923	slu7	71	52.887	Scleropages_formosus
ENSCSAVG00000004927	-	100	53.365	ENSSMAG00000004281	slu7	70	53.365	Scophthalmus_maximus
ENSCSAVG00000004927	-	100	54.087	ENSSDUG00000005127	slu7	71	53.882	Seriola_dumerili
ENSCSAVG00000004927	-	100	54.087	ENSSLDG00000014353	slu7	71	53.882	Seriola_lalandi_dorsalis
ENSCSAVG00000004927	-	100	49.038	ENSSARG00000006902	-	72	48.252	Sorex_araneus
ENSCSAVG00000004927	-	100	49.400	ENSSARG00000014139	-	72	48.244	Sorex_araneus
ENSCSAVG00000004927	-	100	48.810	ENSSARG00000014137	-	72	48.019	Sorex_araneus
ENSCSAVG00000004927	-	77	66.814	ENSSARG00000014128	-	62	58.219	Sorex_araneus
ENSCSAVG00000004927	-	82	62.348	ENSSARG00000014506	-	70	48.806	Sorex_araneus
ENSCSAVG00000004927	-	95	54.660	ENSSARG00000012209	-	67	53.563	Sorex_araneus
ENSCSAVG00000004927	-	100	48.798	ENSSARG00000001869	-	71	47.430	Sorex_araneus
ENSCSAVG00000004927	-	77	65.487	ENSSARG00000006540	-	97	50.138	Sorex_araneus
ENSCSAVG00000004927	-	65	66.316	ENSSARG00000006390	-	61	56.641	Sorex_araneus
ENSCSAVG00000004927	-	100	55.131	ENSSPUG00000000666	SLU7	71	54.333	Sphenodon_punctatus
ENSCSAVG00000004927	-	100	54.217	ENSSPAG00000014100	slu7	69	53.882	Stegastes_partitus
ENSCSAVG00000004927	-	100	54.567	ENSSSCG00000017033	SLU7	70	52.582	Sus_scrofa
ENSCSAVG00000004927	-	100	55.904	ENSTGUG00000001410	SLU7	70	56.174	Taeniopygia_guttata
ENSCSAVG00000004927	-	100	52.404	ENSTRUG00000001335	slu7	70	54.106	Takifugu_rubripes
ENSCSAVG00000004927	-	100	51.306	ENSTNIG00000009677	slu7	73	51.781	Tetraodon_nigroviridis
ENSCSAVG00000004927	-	100	47.281	ENSTBEG00000015604	SLU7	70	47.585	Tupaia_belangeri
ENSCSAVG00000004927	-	100	51.923	ENSTTRG00000011575	SLU7	78	50.812	Tursiops_truncatus
ENSCSAVG00000004927	-	100	54.087	ENSUMAG00000000110	SLU7	65	52.668	Ursus_maritimus
ENSCSAVG00000004927	-	100	54.785	ENSVPAG00000009595	SLU7	70	52.436	Vicugna_pacos
ENSCSAVG00000004927	-	100	54.327	ENSVVUG00000003989	SLU7	65	52.817	Vulpes_vulpes
ENSCSAVG00000004927	-	99	53.699	ENSXETG00000016536	slu7	71	53.699	Xenopus_tropicalis
ENSCSAVG00000004927	-	100	52.415	ENSXCOG00000004207	slu7	70	53.883	Xiphophorus_couchianus
ENSCSAVG00000004927	-	100	53.382	ENSXMAG00000009007	slu7	71	54.327	Xiphophorus_maculatus