EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000004948 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
13813 bases
Position
chrreftig_3:1314038-1327850
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000008318ResIIIPF04851.158.8e-0911
ENSCSAVP00000008320ResIIIPF04851.151.4e-0811
ENSCSAVP00000008323ResIIIPF04851.155.6e-0811
ENSCSAVP00000008321ResIIIPF04851.157e-0811
ENSCSAVP00000008319ResIIIPF04851.151.2e-0711
ENSCSAVP00000008322ResIIIPF04851.151.9e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000008431-3534-ENSCSAVP000000083231178 (aa)-H2YSL3
ENSCSAVT00000008430-4216-ENSCSAVP000000083221251 (aa)-H2YSL2
ENSCSAVT00000008432-2602-ENSCSAVP00000008324825 (aa)-H2YSL4
ENSCSAVT00000008426-3305-ENSCSAVP000000083181071 (aa)-H2YSK8
ENSCSAVT00000008427-3483-ENSCSAVP000000083191161 (aa)-H2YSK9
ENSCSAVT00000008428-3141-ENSCSAVP000000083201047 (aa)-H2YSL0
ENSCSAVT00000008429-4108-ENSCSAVP000000083211134 (aa)-H2YSL1
Gene Model
Click here to download ENSCSAVG00000004948's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004948's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000004948-10079.579ENSCING00000004320-7979.280Ciona_intestinalis
ENSCSAVG00000004948-9061.468FBgn0028887CG34915361.187Drosophila_melanogaster
ENSCSAVG00000004948-9766.962FBgn0265630sno6467.647Drosophila_melanogaster

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