EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000004985 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 12855 bases
Position: chrreftig_1:933232-946086
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008386	GTP_EFTU	PF00009.27	5e-46	1	1
ENSCSAVP00000008381	GTP_EFTU	PF00009.27	6.6e-46	1	1
ENSCSAVP00000008382	GTP_EFTU	PF00009.27	6.7e-46	1	1
ENSCSAVP00000008383	GTP_EFTU	PF00009.27	7.8e-46	1	1
ENSCSAVP00000008384	GTP_EFTU	PF00009.27	1.5e-45	1	1
ENSCSAVP00000008385	GTP_EFTU	PF00009.27	6.6e-41	1	1
ENSCSAVP00000008387	GTP_EFTU	PF00009.27	1.5e-33	1	1
ENSCSAVP00000008388	GTP_EFTU	PF00009.27	5.2e-33	1	1
ENSCSAVP00000008387	GTP_EFTU_D2	PF03144.25	7e-11	1	1
ENSCSAVP00000008384	GTP_EFTU_D2	PF03144.25	8.2e-11	1	1
ENSCSAVP00000008386	GTP_EFTU_D2	PF03144.25	9e-11	1	1
ENSCSAVP00000008382	GTP_EFTU_D2	PF03144.25	9.3e-11	1	1
ENSCSAVP00000008381	GTP_EFTU_D2	PF03144.25	9.7e-11	1	1
ENSCSAVP00000008385	GTP_EFTU_D2	PF03144.25	9.9e-11	1	1
ENSCSAVP00000008383	GTP_EFTU_D2	PF03144.25	1e-10	1	1
ENSCSAVP00000008388	GTP_EFTU_D2	PF03144.25	1e-10	1	1
ENSCSAVP00000008386	EFG_IV	PF03764.18	1.2e-23	1	1
ENSCSAVP00000008383	EFG_IV	PF03764.18	1.6e-23	1	1
ENSCSAVP00000008381	EFG_IV	PF03764.18	1.6e-23	1	1
ENSCSAVP00000008382	EFG_IV	PF03764.18	1.6e-23	1	1
ENSCSAVP00000008384	EFG_IV	PF03764.18	1.7e-23	1	1
ENSCSAVP00000008385	EFG_IV	PF03764.18	1.6e-17	1	1
ENSCSAVP00000008388	EFG_IV	PF03764.18	5.1e-17	1	1
ENSCSAVP00000008387	EFG_IV	PF03764.18	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008493	-	3023	-	ENSCSAVP00000008384	1003 (aa)	-	H2YSS4
ENSCSAVT00000008492	-	2997	-	ENSCSAVP00000008383	989 (aa)	-	H2YSS3
ENSCSAVT00000008491	-	3025	-	ENSCSAVP00000008382	984 (aa)	-	H2YSS2
ENSCSAVT00000008490	-	3011	-	ENSCSAVP00000008381	979 (aa)	-	H2YSS1
ENSCSAVT00000008497	-	2841	-	ENSCSAVP00000008388	947 (aa)	-	H2YSS8
ENSCSAVT00000008496	-	2205	-	ENSCSAVP00000008387	722 (aa)	-	H2YSS7
ENSCSAVT00000008495	-	2520	-	ENSCSAVP00000008386	840 (aa)	-	H2YSS6
ENSCSAVT00000008494	-	2859	-	ENSCSAVP00000008385	953 (aa)	-	H2YSS5

Gene Model

Click here to download ENSCSAVG00000004985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000004985	-	98	30.024	ENSCSAVG00000001787	-	99	31.553
ENSCSAVG00000004985	-	99	38.570	ENSCSAVG00000003974	-	99	42.462
ENSCSAVG00000004985	-	53	37.500	ENSCSAVG00000008514	-	60	33.974

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004985	-	99	79.717	ENSG00000108883	EFTUD2	99	90.769	Homo_sapiens
ENSCSAVG00000004985	-	99	79.717	ENSAPOG00000002433	eftud2	99	77.947	Acanthochromis_polyacanthus
ENSCSAVG00000004985	-	99	79.717	ENSAMEG00000018390	EFTUD2	99	78.106	Ailuropoda_melanoleuca
ENSCSAVG00000004985	-	99	76.887	ENSACIG00000009096	eftud2	99	75.792	Amphilophus_citrinellus
ENSCSAVG00000004985	-	99	74.552	ENSAOCG00000023385	eftud2	99	75.558	Amphiprion_ocellaris
ENSCSAVG00000004985	-	99	79.717	ENSAPEG00000003321	eftud2	99	77.947	Amphiprion_percula
ENSCSAVG00000004985	-	99	79.953	ENSATEG00000000457	eftud2	99	78.243	Anabas_testudineus
ENSCSAVG00000004985	-	99	76.941	ENSAPLG00000011036	EFTUD2	99	76.249	Anas_platyrhynchos
ENSCSAVG00000004985	-	99	80.189	ENSACAG00000007637	EFTUD2	99	78.615	Anolis_carolinensis
ENSCSAVG00000004985	-	99	79.717	ENSANAG00000025320	EFTUD2	99	78.004	Aotus_nancymaae
ENSCSAVG00000004985	-	99	79.953	ENSACLG00000001296	eftud2	99	78.345	Astatotilapia_calliptera
ENSCSAVG00000004985	-	99	79.599	ENSAMXG00000000568	eftud2	99	78.243	Astyanax_mexicanus
ENSCSAVG00000004985	-	99	79.717	ENSBTAG00000013526	EFTUD2	99	77.902	Bos_taurus
ENSCSAVG00000004985	-	99	68.160	WBGene00001166	eftu-2	99	66.598	Caenorhabditis_elegans
ENSCSAVG00000004985	-	99	79.717	ENSCJAG00000012349	EFTUD2	99	78.004	Callithrix_jacchus
ENSCSAVG00000004985	-	99	79.717	ENSCAFG00000014065	EFTUD2	99	78.106	Canis_familiaris
ENSCSAVG00000004985	-	99	79.717	ENSCAFG00020009633	EFTUD2	99	78.106	Canis_lupus_dingo
ENSCSAVG00000004985	-	99	79.717	ENSCHIG00000011603	EFTUD2	99	77.902	Capra_hircus
ENSCSAVG00000004985	-	99	79.599	ENSTSYG00000013172	EFTUD2	99	77.846	Carlito_syrichta
ENSCSAVG00000004985	-	99	79.599	ENSCAPG00000014639	EFTUD2	99	77.902	Cavia_aperea
ENSCSAVG00000004985	-	99	79.599	ENSCPOG00000010566	EFTUD2	99	77.902	Cavia_porcellus
ENSCSAVG00000004985	-	99	79.717	ENSCCAG00000035302	EFTUD2	99	78.004	Cebus_capucinus
ENSCSAVG00000004985	-	99	79.717	ENSCATG00000035809	EFTUD2	99	78.004	Cercocebus_atys
ENSCSAVG00000004985	-	99	79.599	ENSCLAG00000014733	EFTUD2	99	77.699	Chinchilla_lanigera
ENSCSAVG00000004985	-	99	79.717	ENSCSAG00000003614	EFTUD2	99	78.004	Chlorocebus_sabaeus
ENSCSAVG00000004985	-	95	69.900	ENSCHOG00000010031	EFTUD2	99	69.248	Choloepus_hoffmanni
ENSCSAVG00000004985	-	99	79.717	ENSCPBG00000008904	EFTUD2	99	78.310	Chrysemys_picta_bellii
ENSCSAVG00000004985	-	100	95.053	ENSCING00000009372	-	99	93.054	Ciona_intestinalis
ENSCSAVG00000004985	-	99	79.717	ENSCANG00000026557	EFTUD2	99	78.004	Colobus_angolensis_palliatus
ENSCSAVG00000004985	-	99	79.717	ENSCGRG00001009904	Eftud2	99	77.947	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004985	-	99	79.717	ENSCGRG00000003825	Eftud2	99	77.947	Cricetulus_griseus_crigri
ENSCSAVG00000004985	-	99	79.481	ENSCSEG00000016775	eftud2	99	77.835	Cynoglossus_semilaevis
ENSCSAVG00000004985	-	99	80.189	ENSCVAG00000012537	eftud2	99	78.550	Cyprinodon_variegatus
ENSCSAVG00000004985	-	99	79.363	ENSDARG00000012261	eftud2	99	77.835	Danio_rerio
ENSCSAVG00000004985	-	99	79.363	ENSDNOG00000008033	EFTUD2	99	77.699	Dasypus_novemcinctus
ENSCSAVG00000004985	-	99	79.717	ENSDORG00000011566	Eftud2	99	78.049	Dipodomys_ordii
ENSCSAVG00000004985	-	99	75.236	FBgn0039566	CG4849	99	73.191	Drosophila_melanogaster
ENSCSAVG00000004985	-	95	90.217	ENSETEG00000005678	EFTUD2	92	90.659	Echinops_telfairi
ENSCSAVG00000004985	-	88	89.604	ENSEBUG00000004047	-	96	80.028	Eptatretus_burgeri
ENSCSAVG00000004985	-	99	79.717	ENSEASG00005010321	EFTUD2	99	78.106	Equus_asinus_asinus
ENSCSAVG00000004985	-	99	79.717	ENSECAG00000019363	EFTUD2	93	78.106	Equus_caballus
ENSCSAVG00000004985	-	90	91.525	ENSEEUG00000011128	EFTUD2	92	92.241	Erinaceus_europaeus
ENSCSAVG00000004985	-	100	79.623	ENSELUG00000017169	eftud2	99	77.937	Esox_lucius
ENSCSAVG00000004985	-	99	79.717	ENSFCAG00000005466	EFTUD2	99	78.208	Felis_catus
ENSCSAVG00000004985	-	99	79.953	ENSFALG00000007551	EFTUD2	99	78.717	Ficedula_albicollis
ENSCSAVG00000004985	-	99	79.599	ENSFDAG00000013143	EFTUD2	99	78.049	Fukomys_damarensis
ENSCSAVG00000004985	-	99	79.953	ENSFHEG00000013479	eftud2	99	78.345	Fundulus_heteroclitus
ENSCSAVG00000004985	-	100	79.741	ENSGMOG00000014277	eftud2	99	78.039	Gadus_morhua
ENSCSAVG00000004985	-	99	79.835	ENSGALG00000000988	EFTUD2	99	80.652	Gallus_gallus
ENSCSAVG00000004985	-	99	79.953	ENSGAFG00000002263	eftud2	99	78.447	Gambusia_affinis
ENSCSAVG00000004985	-	99	79.717	ENSGACG00000009163	eftud2	99	78.243	Gasterosteus_aculeatus
ENSCSAVG00000004985	-	99	79.717	ENSGGOG00000012999	EFTUD2	99	78.004	Gorilla_gorilla
ENSCSAVG00000004985	-	99	79.953	ENSHBUG00000023546	eftud2	99	78.243	Haplochromis_burtoni
ENSCSAVG00000004985	-	99	79.481	ENSHGLG00000014497	EFTUD2	99	77.947	Heterocephalus_glaber_female
ENSCSAVG00000004985	-	99	79.481	ENSHGLG00100013432	EFTUD2	99	77.947	Heterocephalus_glaber_male
ENSCSAVG00000004985	-	99	79.717	ENSHCOG00000017689	eftud2	99	78.039	Hippocampus_comes
ENSCSAVG00000004985	-	99	79.599	ENSIPUG00000023182	Eftud2	99	78.039	Ictalurus_punctatus
ENSCSAVG00000004985	-	99	79.717	ENSSTOG00000012188	EFTUD2	99	78.057	Ictidomys_tridecemlineatus
ENSCSAVG00000004985	-	99	79.717	ENSJJAG00000018268	Eftud2	99	79.553	Jaculus_jaculus
ENSCSAVG00000004985	-	99	79.717	ENSKMAG00000021027	eftud2	99	77.846	Kryptolebias_marmoratus
ENSCSAVG00000004985	-	99	79.469	ENSLBEG00000005875	eftud2	99	79.671	Labrus_bergylta
ENSCSAVG00000004985	-	100	80.094	ENSLACG00000012918	EFTUD2	99	78.345	Latimeria_chalumnae
ENSCSAVG00000004985	-	100	79.976	ENSLOCG00000011460	eftud2	99	78.049	Lepisosteus_oculatus
ENSCSAVG00000004985	-	99	79.717	ENSLAFG00000015344	EFTUD2	99	78.252	Loxodonta_africana
ENSCSAVG00000004985	-	99	79.717	ENSMFAG00000042655	EFTUD2	99	78.004	Macaca_fascicularis
ENSCSAVG00000004985	-	99	79.717	ENSMMUG00000013118	EFTUD2	99	90.769	Macaca_mulatta
ENSCSAVG00000004985	-	99	79.717	ENSMNEG00000037895	EFTUD2	99	78.004	Macaca_nemestrina
ENSCSAVG00000004985	-	99	79.717	ENSMLEG00000032960	EFTUD2	99	78.004	Mandrillus_leucophaeus
ENSCSAVG00000004985	-	99	79.835	ENSMAMG00000022190	eftud2	99	78.049	Mastacembelus_armatus
ENSCSAVG00000004985	-	99	79.953	ENSMZEG00005022885	eftud2	99	78.345	Maylandia_zebra
ENSCSAVG00000004985	-	99	79.647	ENSMGAG00000010083	EFTUD2	99	78.557	Meleagris_gallopavo
ENSCSAVG00000004985	-	99	79.717	ENSMAUG00000021178	Eftud2	99	78.049	Mesocricetus_auratus
ENSCSAVG00000004985	-	99	79.717	ENSMICG00000016592	EFTUD2	99	78.004	Microcebus_murinus
ENSCSAVG00000004985	-	89	67.426	ENSMOCG00000017653	-	90	63.385	Microtus_ochrogaster
ENSCSAVG00000004985	-	99	79.717	ENSMOCG00000009039	-	99	78.049	Microtus_ochrogaster
ENSCSAVG00000004985	-	99	79.928	ENSMMOG00000020811	eftud2	99	80.846	Mola_mola
ENSCSAVG00000004985	-	99	79.599	ENSMODG00000011347	EFTUD2	99	78.004	Monodelphis_domestica
ENSCSAVG00000004985	-	99	78.136	ENSMALG00000014501	eftud2	99	79.083	Monopterus_albus
ENSCSAVG00000004985	-	99	79.717	MGP_CAROLIEiJ_G0017263	Eftud2	99	77.800	Mus_caroli
ENSCSAVG00000004985	-	99	79.717	ENSMUSG00000020929	Eftud2	99	78.287	Mus_musculus
ENSCSAVG00000004985	-	99	79.717	MGP_PahariEiJ_G0018393	Eftud2	99	77.800	Mus_pahari
ENSCSAVG00000004985	-	99	79.717	MGP_SPRETEiJ_G0018106	Eftud2	99	77.800	Mus_spretus
ENSCSAVG00000004985	-	98	79.306	ENSMPUG00000009136	EFTUD2	90	77.662	Mustela_putorius_furo
ENSCSAVG00000004985	-	99	79.717	ENSMLUG00000012164	EFTUD2	99	78.106	Myotis_lucifugus
ENSCSAVG00000004985	-	99	79.717	ENSNGAG00000017834	Eftud2	99	78.150	Nannospalax_galili
ENSCSAVG00000004985	-	99	79.835	ENSNBRG00000020081	eftud2	99	78.243	Neolamprologus_brichardi
ENSCSAVG00000004985	-	98	79.352	ENSNLEG00000005210	EFTUD2	96	76.076	Nomascus_leucogenys
ENSCSAVG00000004985	-	99	76.651	ENSMEUG00000015620	EFTUD2	99	74.542	Notamacropus_eugenii
ENSCSAVG00000004985	-	95	80.612	ENSOPRG00000016323	EFTUD2	94	80.612	Ochotona_princeps
ENSCSAVG00000004985	-	94	64.993	ENSODEG00000003385	-	99	64.993	Octodon_degus
ENSCSAVG00000004985	-	99	79.481	ENSODEG00000018041	-	99	77.937	Octodon_degus
ENSCSAVG00000004985	-	99	79.953	ENSONIG00000000912	eftud2	99	78.345	Oreochromis_niloticus
ENSCSAVG00000004985	-	99	79.717	ENSOCUG00000006879	EFTUD2	99	78.039	Oryctolagus_cuniculus
ENSCSAVG00000004985	-	99	79.953	ENSORLG00000003109	eftud2	99	78.345	Oryzias_latipes
ENSCSAVG00000004985	-	99	79.953	ENSORLG00020009865	eftud2	99	78.345	Oryzias_latipes_hni
ENSCSAVG00000004985	-	99	79.953	ENSORLG00015002611	eftud2	99	80.828	Oryzias_latipes_hsok
ENSCSAVG00000004985	-	99	79.929	ENSOGAG00000012918	EFTUD2	99	76.782	Otolemur_garnettii
ENSCSAVG00000004985	-	99	79.717	ENSOARG00000009078	EFTUD2	97	77.902	Ovis_aries
ENSCSAVG00000004985	-	99	79.717	ENSPPAG00000029450	EFTUD2	99	78.004	Pan_paniscus
ENSCSAVG00000004985	-	99	79.717	ENSPPRG00000010981	EFTUD2	99	78.106	Panthera_pardus
ENSCSAVG00000004985	-	99	79.717	ENSPTIG00000007703	EFTUD2	99	78.106	Panthera_tigris_altaica
ENSCSAVG00000004985	-	99	79.717	ENSPTRG00000009287	EFTUD2	99	78.004	Pan_troglodytes
ENSCSAVG00000004985	-	99	79.717	ENSPANG00000021284	EFTUD2	99	78.004	Papio_anubis
ENSCSAVG00000004985	-	95	78.598	ENSPSIG00000004505	EFTUD2	99	76.387	Pelodiscus_sinensis
ENSCSAVG00000004985	-	100	71.910	ENSPMGG00000007281	eftud2	99	71.951	Periophthalmus_magnuspinnatus
ENSCSAVG00000004985	-	99	79.717	ENSPEMG00000005129	Eftud2	99	77.947	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004985	-	99	79.599	ENSPCIG00000015027	EFTUD2	99	77.902	Phascolarctos_cinereus
ENSCSAVG00000004985	-	99	80.071	ENSPFOG00000008515	eftud2	99	78.447	Poecilia_formosa
ENSCSAVG00000004985	-	99	80.071	ENSPLAG00000010393	eftud2	99	78.447	Poecilia_latipinna
ENSCSAVG00000004985	-	99	80.071	ENSPMEG00000005087	eftud2	99	78.447	Poecilia_mexicana
ENSCSAVG00000004985	-	98	80.072	ENSPPYG00000008320	EFTUD2	99	76.986	Pongo_abelii
ENSCSAVG00000004985	-	99	76.651	ENSPCAG00000000812	EFTUD2	99	74.695	Procavia_capensis
ENSCSAVG00000004985	-	99	79.717	ENSPCOG00000020029	EFTUD2	99	78.004	Propithecus_coquereli
ENSCSAVG00000004985	-	99	76.769	ENSPVAG00000016155	EFTUD2	99	74.440	Pteropus_vampyrus
ENSCSAVG00000004985	-	99	79.835	ENSPNYG00000012448	eftud2	99	78.243	Pundamilia_nyererei
ENSCSAVG00000004985	-	99	79.363	ENSPNAG00000012490	eftud2	99	77.732	Pygocentrus_nattereri
ENSCSAVG00000004985	-	99	79.717	ENSRNOG00000002818	Eftud2	99	78.447	Rattus_norvegicus
ENSCSAVG00000004985	-	99	79.717	ENSRBIG00000043255	EFTUD2	99	78.004	Rhinopithecus_bieti
ENSCSAVG00000004985	-	99	79.717	ENSRROG00000042925	EFTUD2	99	78.004	Rhinopithecus_roxellana
ENSCSAVG00000004985	-	98	34.302	YKL173W	SNU114	97	33.922	Saccharomyces_cerevisiae
ENSCSAVG00000004985	-	99	79.717	ENSSBOG00000021892	EFTUD2	99	78.004	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004985	-	99	79.599	ENSSHAG00000008134	EFTUD2	98	80.435	Sarcophilus_harrisii
ENSCSAVG00000004985	-	100	79.741	ENSSFOG00015023272	eftud2	99	77.947	Scleropages_formosus
ENSCSAVG00000004985	-	99	79.717	ENSSMAG00000010174	eftud2	99	78.286	Scophthalmus_maximus
ENSCSAVG00000004985	-	99	79.717	ENSSDUG00000022675	eftud2	99	78.049	Seriola_dumerili
ENSCSAVG00000004985	-	99	79.835	ENSSLDG00000001595	eftud2	99	78.150	Seriola_lalandi_dorsalis
ENSCSAVG00000004985	-	100	71.604	ENSSARG00000008664	EFTUD2	99	71.502	Sorex_araneus
ENSCSAVG00000004985	-	99	79.481	ENSSPUG00000010249	EFTUD2	99	78.004	Sphenodon_punctatus
ENSCSAVG00000004985	-	99	79.835	ENSSPAG00000016235	eftud2	99	77.947	Stegastes_partitus
ENSCSAVG00000004985	-	99	79.717	ENSSSCG00000017346	EFTUD2	99	77.937	Sus_scrofa
ENSCSAVG00000004985	-	89	78.877	ENSTGUG00000002065	EFTUD2	98	78.908	Taeniopygia_guttata
ENSCSAVG00000004985	-	99	79.245	ENSTRUG00000016422	eftud2	99	77.732	Takifugu_rubripes
ENSCSAVG00000004985	-	100	73.957	ENSTNIG00000005346	eftud2	99	74.466	Tetraodon_nigroviridis
ENSCSAVG00000004985	-	92	93.182	ENSTBEG00000011337	EFTUD2	99	73.218	Tupaia_belangeri
ENSCSAVG00000004985	-	99	76.179	ENSTTRG00000006230	EFTUD2	90	76.871	Tursiops_truncatus
ENSCSAVG00000004985	-	99	78.892	ENSUAMG00000000399	EFTUD2	99	77.291	Ursus_americanus
ENSCSAVG00000004985	-	99	79.717	ENSUMAG00000014323	EFTUD2	99	78.106	Ursus_maritimus
ENSCSAVG00000004985	-	88	90.769	ENSVPAG00000002748	EFTUD2	88	90.769	Vicugna_pacos
ENSCSAVG00000004985	-	99	79.717	ENSVVUG00000018113	EFTUD2	99	78.106	Vulpes_vulpes
ENSCSAVG00000004985	-	99	79.009	ENSXETG00000003394	eftud2	98	79.565	Xenopus_tropicalis
ENSCSAVG00000004985	-	94	80.051	ENSXCOG00000017309	eftud2	96	80.051	Xiphophorus_couchianus
ENSCSAVG00000004985	-	99	79.953	ENSXMAG00000008494	eftud2	99	78.447	Xiphophorus_maculatus