EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000004988 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 11857 bases
Position: chrreftig_21:1399164-1411020
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008394	tRNA-synt_1g	PF09334.11	3.5e-23	1	2
ENSCSAVP00000008394	tRNA-synt_1g	PF09334.11	3.5e-23	2	2
ENSCSAVP00000008395	tRNA-synt_1g	PF09334.11	5.2e-22	1	1
ENSCSAVP00000008397	tRNA-synt_1g	PF09334.11	7.7e-22	1	1
ENSCSAVP00000008396	tRNA-synt_1g	PF09334.11	1.1e-21	1	1
ENSCSAVP00000008393	tRNA-synt_1g	PF09334.11	1.1e-21	1	1
ENSCSAVP00000008392	tRNA-synt_1g	PF09334.11	3e-20	1	1
ENSCSAVP00000008395	Anticodon_1	PF08264.13	2e-19	1	1
ENSCSAVP00000008394	Anticodon_1	PF08264.13	2e-19	1	1
ENSCSAVP00000008393	Anticodon_1	PF08264.13	2e-19	1	1
ENSCSAVP00000008392	Anticodon_1	PF08264.13	2.1e-19	1	1
ENSCSAVP00000008396	Anticodon_1	PF08264.13	2.1e-19	1	1
ENSCSAVP00000008397	Anticodon_1	PF08264.13	3.9e-19	1	1
ENSCSAVP00000008395	tRNA-synt_1	PF00133.22	6.5e-155	1	1
ENSCSAVP00000008392	tRNA-synt_1	PF00133.22	2.5e-154	1	1
ENSCSAVP00000008396	tRNA-synt_1	PF00133.22	3.3e-154	1	1
ENSCSAVP00000008397	tRNA-synt_1	PF00133.22	2.2e-153	1	1
ENSCSAVP00000008394	tRNA-synt_1	PF00133.22	6.1e-151	1	1
ENSCSAVP00000008393	tRNA-synt_1	PF00133.22	2.7e-150	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008501	-	2853	-	ENSCSAVP00000008392	950 (aa)	-	H2YST2
ENSCSAVT00000008503	-	2355	-	ENSCSAVP00000008394	785 (aa)	-	H2YST4
ENSCSAVT00000008502	-	2370	-	ENSCSAVP00000008393	790 (aa)	-	H2YST3
ENSCSAVT00000008505	-	2358	-	ENSCSAVP00000008396	786 (aa)	-	H2YST6
ENSCSAVT00000008504	-	2307	-	ENSCSAVP00000008395	769 (aa)	-	H2YST5
ENSCSAVT00000008506	-	2283	-	ENSCSAVP00000008397	761 (aa)	-	H2YST7

Gene Model

Click here to download ENSCSAVG00000004988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000004988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000004988	-	99	46.608	ENSG00000067704	IARS2	94	42.229	Homo_sapiens
ENSCSAVG00000004988	-	100	45.902	ENSAPOG00000007331	iars2	94	42.331	Acanthochromis_polyacanthus
ENSCSAVG00000004988	-	99	47.925	ENSAMEG00000010055	IARS2	94	43.603	Ailuropoda_melanoleuca
ENSCSAVG00000004988	-	94	45.772	ENSACIG00000004676	iars2	94	40.428	Amphilophus_citrinellus
ENSCSAVG00000004988	-	100	47.103	ENSAOCG00000011811	iars2	94	43.221	Amphiprion_ocellaris
ENSCSAVG00000004988	-	100	47.229	ENSAPEG00000003588	iars2	94	43.323	Amphiprion_percula
ENSCSAVG00000004988	-	99	47.103	ENSATEG00000012272	iars2	94	43.367	Anabas_testudineus
ENSCSAVG00000004988	-	93	48.378	ENSAPLG00000004136	IARS2	99	44.181	Anas_platyrhynchos
ENSCSAVG00000004988	-	96	47.798	ENSACAG00000001566	IARS2	99	43.810	Anolis_carolinensis
ENSCSAVG00000004988	-	99	44.403	ENSANAG00000013146	IARS2	93	40.577	Aotus_nancymaae
ENSCSAVG00000004988	-	100	47.985	ENSACLG00000006953	-	94	43.833	Astatotilapia_calliptera
ENSCSAVG00000004988	-	100	45.707	ENSACLG00000014763	iars2	93	42.127	Astatotilapia_calliptera
ENSCSAVG00000004988	-	99	47.698	ENSAMXG00000018899	iars2	94	42.540	Astyanax_mexicanus
ENSCSAVG00000004988	-	99	47.649	ENSBTAG00000012582	IARS2	94	43.296	Bos_taurus
ENSCSAVG00000004988	-	99	34.864	WBGene00002153	iars-2	95	33.091	Caenorhabditis_elegans
ENSCSAVG00000004988	-	95	47.137	ENSCJAG00000036768	IARS2	88	47.222	Callithrix_jacchus
ENSCSAVG00000004988	-	98	46.923	ENSCAFG00000010952	IARS2	99	42.768	Canis_familiaris
ENSCSAVG00000004988	-	99	47.268	ENSCAFG00020004022	IARS2	94	43.091	Canis_lupus_dingo
ENSCSAVG00000004988	-	99	47.776	ENSCHIG00000022986	IARS2	94	43.398	Capra_hircus
ENSCSAVG00000004988	-	99	47.613	ENSTSYG00000007722	IARS2	94	43.149	Carlito_syrichta
ENSCSAVG00000004988	-	84	44.024	ENSCAPG00000016129	IARS2	92	39.013	Cavia_aperea
ENSCSAVG00000004988	-	99	45.881	ENSCPOG00000012942	IARS2	94	41.344	Cavia_porcellus
ENSCSAVG00000004988	-	99	46.482	ENSCCAG00000021848	IARS2	91	43.559	Cebus_capucinus
ENSCSAVG00000004988	-	99	45.108	ENSCATG00000043392	IARS2	94	40.347	Cercocebus_atys
ENSCSAVG00000004988	-	95	48.404	ENSCLAG00000003537	IARS2	99	43.506	Chinchilla_lanigera
ENSCSAVG00000004988	-	99	44.279	ENSCSAG00000015833	IARS2	94	40.324	Chlorocebus_sabaeus
ENSCSAVG00000004988	-	99	44.806	ENSCHOG00000007208	IARS2	94	40.142	Choloepus_hoffmanni
ENSCSAVG00000004988	-	100	48.683	ENSCPBG00000000463	IARS2	95	44.229	Chrysemys_picta_bellii
ENSCSAVG00000004988	-	100	68.798	ENSCING00000008497	-	98	62.449	Ciona_intestinalis
ENSCSAVG00000004988	-	100	46.366	ENSCANG00000039390	IARS2	94	42.041	Colobus_angolensis_palliatus
ENSCSAVG00000004988	-	99	46.859	ENSCGRG00001023111	Iars2	94	42.434	Cricetulus_griseus_chok1gshd
ENSCSAVG00000004988	-	95	47.105	ENSCGRG00000014841	Iars2	99	42.344	Cricetulus_griseus_crigri
ENSCSAVG00000004988	-	99	47.938	ENSCSEG00000000072	iars2	94	43.795	Cynoglossus_semilaevis
ENSCSAVG00000004988	-	100	47.355	ENSCVAG00000006967	iars2	94	43.429	Cyprinodon_variegatus
ENSCSAVG00000004988	-	99	48.359	ENSDARG00000044134	iars2	96	44.000	Danio_rerio
ENSCSAVG00000004988	-	99	45.247	ENSDNOG00000001167	IARS2	94	41.327	Dasypus_novemcinctus
ENSCSAVG00000004988	-	100	46.992	ENSDORG00000009975	Iars2	94	42.697	Dipodomys_ordii
ENSCSAVG00000004988	-	99	42.125	FBgn0036569	IleRS-m	97	37.175	Drosophila_melanogaster
ENSCSAVG00000004988	-	99	44.346	ENSETEG00000015309	IARS2	84	42.242	Echinops_telfairi
ENSCSAVG00000004988	-	76	47.993	ENSEBUG00000014221	-	78	47.993	Eptatretus_burgeri
ENSCSAVG00000004988	-	99	47.236	ENSEASG00005007698	IARS2	94	42.989	Equus_asinus_asinus
ENSCSAVG00000004988	-	99	47.487	ENSECAG00000022576	IARS2	94	43.193	Equus_caballus
ENSCSAVG00000004988	-	71	48.450	ENSEEUG00000014971	IARS2	85	43.077	Erinaceus_europaeus
ENSCSAVG00000004988	-	99	48.601	ENSELUG00000002308	iars2	94	43.897	Esox_lucius
ENSCSAVG00000004988	-	99	46.106	ENSFCAG00000002597	IARS2	94	42.536	Felis_catus
ENSCSAVG00000004988	-	89	47.191	ENSFALG00000012124	IARS2	99	43.541	Ficedula_albicollis
ENSCSAVG00000004988	-	95	46.676	ENSFDAG00000017577	IARS2	99	42.027	Fukomys_damarensis
ENSCSAVG00000004988	-	100	45.581	ENSFHEG00000000205	iars2	94	41.949	Fundulus_heteroclitus
ENSCSAVG00000004988	-	99	47.402	ENSGMOG00000016408	iars2	94	43.460	Gadus_morhua
ENSCSAVG00000004988	-	100	48.181	ENSGALG00000009566	IARS2	95	44.241	Gallus_gallus
ENSCSAVG00000004988	-	100	47.733	ENSGAFG00000019495	iars2	94	43.616	Gambusia_affinis
ENSCSAVG00000004988	-	99	48.101	ENSGACG00000013305	iars2	93	44.251	Gasterosteus_aculeatus
ENSCSAVG00000004988	-	96	48.892	ENSGAGG00000001959	IARS2	98	44.503	Gopherus_agassizii
ENSCSAVG00000004988	-	99	46.887	ENSGGOG00000007340	IARS2	94	42.331	Gorilla_gorilla
ENSCSAVG00000004988	-	100	46.725	ENSHBUG00000010898	iars2	94	42.813	Haplochromis_burtoni
ENSCSAVG00000004988	-	99	46.859	ENSHGLG00000002201	IARS2	95	42.740	Heterocephalus_glaber_female
ENSCSAVG00000004988	-	95	47.237	ENSHGLG00100011459	IARS2	98	44.294	Heterocephalus_glaber_male
ENSCSAVG00000004988	-	99	47.843	ENSHCOG00000001452	iars2	94	43.910	Hippocampus_comes
ENSCSAVG00000004988	-	99	47.771	ENSIPUG00000017082	iars2	95	42.857	Ictalurus_punctatus
ENSCSAVG00000004988	-	99	47.487	ENSSTOG00000005879	IARS2	94	43.047	Ictidomys_tridecemlineatus
ENSCSAVG00000004988	-	100	46.617	ENSJJAG00000017672	Iars2	94	42.143	Jaculus_jaculus
ENSCSAVG00000004988	-	100	47.103	ENSKMAG00000002679	iars2	94	42.915	Kryptolebias_marmoratus
ENSCSAVG00000004988	-	99	46.056	ENSLBEG00000003065	iars2	94	42.041	Labrus_bergylta
ENSCSAVG00000004988	-	99	46.752	ENSLACG00000012668	IARS2	94	42.653	Latimeria_chalumnae
ENSCSAVG00000004988	-	83	33.714	ENSLOCG00000017033	IARS2	85	33.714	Lepisosteus_oculatus
ENSCSAVG00000004988	-	99	46.633	ENSLAFG00000011090	IARS2	95	42.213	Loxodonta_africana
ENSCSAVG00000004988	-	99	46.482	ENSMFAG00000000345	IARS2	94	42.127	Macaca_fascicularis
ENSCSAVG00000004988	-	99	46.482	ENSMMUG00000007783	IARS2	94	42.127	Macaca_mulatta
ENSCSAVG00000004988	-	99	43.964	ENSMNEG00000038908	IARS2	94	39.428	Macaca_nemestrina
ENSCSAVG00000004988	-	99	45.235	ENSMLEG00000002798	IARS2	94	40.224	Mandrillus_leucophaeus
ENSCSAVG00000004988	-	100	47.296	ENSMAMG00000015306	iars2	94	43.673	Mastacembelus_armatus
ENSCSAVG00000004988	-	100	47.985	ENSMZEG00005014151	iars2	94	43.935	Maylandia_zebra
ENSCSAVG00000004988	-	96	48.042	ENSMGAG00000009158	IARS2	99	44.245	Meleagris_gallopavo
ENSCSAVG00000004988	-	99	44.724	ENSMAUG00000012822	Iars2	94	40.695	Mesocricetus_auratus
ENSCSAVG00000004988	-	99	46.734	ENSMICG00000017746	IARS2	94	42.638	Microcebus_murinus
ENSCSAVG00000004988	-	99	46.985	ENSMOCG00000017822	Iars2	94	42.406	Microtus_ochrogaster
ENSCSAVG00000004988	-	99	47.776	ENSMMOG00000005010	iars2	95	43.207	Mola_mola
ENSCSAVG00000004988	-	99	46.252	ENSMODG00000004467	IARS2	94	41.675	Monodelphis_domestica
ENSCSAVG00000004988	-	99	47.402	ENSMALG00000012599	iars2	95	43.469	Monopterus_albus
ENSCSAVG00000004988	-	99	46.760	MGP_CAROLIEiJ_G0015021	Iars2	91	47.407	Mus_caroli
ENSCSAVG00000004988	-	99	46.379	ENSMUSG00000026618	Iars2	91	47.259	Mus_musculus
ENSCSAVG00000004988	-	99	47.141	MGP_PahariEiJ_G0028253	Iars2	91	48.000	Mus_pahari
ENSCSAVG00000004988	-	99	46.379	MGP_SPRETEiJ_G0015821	Iars2	91	47.259	Mus_spretus
ENSCSAVG00000004988	-	99	47.864	ENSMPUG00000004100	IARS2	88	43.398	Mustela_putorius_furo
ENSCSAVG00000004988	-	96	47.464	ENSMLUG00000007322	IARS2	93	43.067	Myotis_lucifugus
ENSCSAVG00000004988	-	99	46.506	ENSNGAG00000004930	Iars2	94	41.820	Nannospalax_galili
ENSCSAVG00000004988	-	100	47.733	ENSNBRG00000024204	iars2	94	43.731	Neolamprologus_brichardi
ENSCSAVG00000004988	-	99	46.734	ENSNLEG00000013853	IARS2	94	42.375	Nomascus_leucogenys
ENSCSAVG00000004988	-	70	39.888	ENSMEUG00000007251	-	55	39.888	Notamacropus_eugenii
ENSCSAVG00000004988	-	63	57.865	ENSOPRG00000014398	IARS2	61	57.865	Ochotona_princeps
ENSCSAVG00000004988	-	95	47.145	ENSODEG00000014882	IARS2	92	42.255	Octodon_degus
ENSCSAVG00000004988	-	100	47.607	ENSONIG00000012252	iars2	98	43.642	Oreochromis_niloticus
ENSCSAVG00000004988	-	89	46.241	ENSOANG00000001426	IARS2	99	41.406	Ornithorhynchus_anatinus
ENSCSAVG00000004988	-	95	46.518	ENSOCUG00000010419	IARS2	99	41.939	Oryctolagus_cuniculus
ENSCSAVG00000004988	-	100	47.925	ENSORLG00000017813	iars2	95	42.475	Oryzias_latipes
ENSCSAVG00000004988	-	100	47.799	ENSORLG00020014946	iars2	95	43.276	Oryzias_latipes_hni
ENSCSAVG00000004988	-	100	47.925	ENSORLG00015011515	iars2	95	43.175	Oryzias_latipes_hsok
ENSCSAVG00000004988	-	100	47.296	ENSOMEG00000019477	iars2	94	43.571	Oryzias_melastigma
ENSCSAVG00000004988	-	99	37.940	ENSOGAG00000011364	IARS2	94	35.097	Otolemur_garnettii
ENSCSAVG00000004988	-	96	47.718	ENSOARG00000012333	IARS2	98	43.067	Ovis_aries
ENSCSAVG00000004988	-	99	46.608	ENSPPAG00000029870	IARS2	94	42.229	Pan_paniscus
ENSCSAVG00000004988	-	99	47.236	ENSPPRG00000012244	IARS2	94	43.456	Panthera_pardus
ENSCSAVG00000004988	-	97	46.623	ENSPTIG00000002279	IARS2	99	43.083	Panthera_tigris_altaica
ENSCSAVG00000004988	-	99	46.734	ENSPTRG00000001997	IARS2	94	42.331	Pan_troglodytes
ENSCSAVG00000004988	-	99	46.608	ENSPANG00000020678	IARS2	94	42.229	Papio_anubis
ENSCSAVG00000004988	-	99	49.427	ENSPKIG00000022381	iars2	94	44.570	Paramormyrops_kingsleyae
ENSCSAVG00000004988	-	89	47.814	ENSPSIG00000006220	IARS2	99	42.682	Pelodiscus_sinensis
ENSCSAVG00000004988	-	64	41.468	ENSPMGG00000006183	iars2	89	41.600	Periophthalmus_magnuspinnatus
ENSCSAVG00000004988	-	99	47.268	ENSPEMG00000000136	Iars2	94	42.536	Peromyscus_maniculatus_bairdii
ENSCSAVG00000004988	-	99	39.623	ENSPMAG00000001894	iars2	95	36.069	Petromyzon_marinus
ENSCSAVG00000004988	-	99	45.478	ENSPCIG00000008692	IARS2	100	40.484	Phascolarctos_cinereus
ENSCSAVG00000004988	-	100	47.733	ENSPFOG00000007310	iars2	95	43.571	Poecilia_formosa
ENSCSAVG00000004988	-	100	47.733	ENSPLAG00000013833	iars2	94	43.661	Poecilia_latipinna
ENSCSAVG00000004988	-	100	47.733	ENSPMEG00000023132	iars2	85	43.616	Poecilia_mexicana
ENSCSAVG00000004988	-	100	47.547	ENSPREG00000003827	iars2	89	42.473	Poecilia_reticulata
ENSCSAVG00000004988	-	99	46.608	ENSPPYG00000000208	IARS2	94	42.229	Pongo_abelii
ENSCSAVG00000004988	-	72	53.872	ENSPCAG00000016006	IARS2	57	53.872	Procavia_capensis
ENSCSAVG00000004988	-	99	46.357	ENSPCOG00000019722	IARS2	94	42.229	Propithecus_coquereli
ENSCSAVG00000004988	-	99	44.473	ENSPVAG00000013149	IARS2	94	40.900	Pteropus_vampyrus
ENSCSAVG00000004988	-	100	47.859	ENSPNYG00000018793	iars2	94	43.731	Pundamilia_nyererei
ENSCSAVG00000004988	-	99	46.095	ENSPNAG00000025742	iars2	96	41.856	Pygocentrus_nattereri
ENSCSAVG00000004988	-	99	47.141	ENSRNOG00000002368	Iars2	91	47.467	Rattus_norvegicus
ENSCSAVG00000004988	-	100	46.617	ENSRBIG00000002958	IARS2	94	42.245	Rhinopithecus_bieti
ENSCSAVG00000004988	-	100	46.617	ENSRROG00000013275	IARS2	94	42.245	Rhinopithecus_roxellana
ENSCSAVG00000004988	-	100	35.196	YPL040C	ISM1	97	32.965	Saccharomyces_cerevisiae
ENSCSAVG00000004988	-	99	46.608	ENSSBOG00000020069	IARS2	93	42.343	Saimiri_boliviensis_boliviensis
ENSCSAVG00000004988	-	100	47.880	ENSSHAG00000004762	IARS2	100	44.145	Sarcophilus_harrisii
ENSCSAVG00000004988	-	99	45.133	ENSSFOG00015007814	iars2	98	41.207	Scleropages_formosus
ENSCSAVG00000004988	-	99	48.092	ENSSMAG00000014304	iars2	86	43.833	Scophthalmus_maximus
ENSCSAVG00000004988	-	99	48.167	ENSSDUG00000020153	iars2	94	44.127	Seriola_dumerili
ENSCSAVG00000004988	-	99	48.228	ENSSLDG00000014169	iars2	94	43.776	Seriola_lalandi_dorsalis
ENSCSAVG00000004988	-	96	44.243	ENSSARG00000012575	IARS2	99	41.015	Sorex_araneus
ENSCSAVG00000004988	-	94	48.005	ENSSPUG00000009468	IARS2	96	41.598	Sphenodon_punctatus
ENSCSAVG00000004988	-	99	47.782	ENSSPAG00000001847	iars2	94	43.265	Stegastes_partitus
ENSCSAVG00000004988	-	99	48.489	ENSSSCG00000010823	IARS2	94	43.820	Sus_scrofa
ENSCSAVG00000004988	-	100	47.613	ENSTGUG00000002764	IARS2	96	44.252	Taeniopygia_guttata
ENSCSAVG00000004988	-	100	48.744	ENSTRUG00000004465	iars2	95	44.388	Takifugu_rubripes
ENSCSAVG00000004988	-	100	47.125	ENSTNIG00000005422	iars2	98	43.133	Tetraodon_nigroviridis
ENSCSAVG00000004988	-	80	50.000	ENSTBEG00000002312	IARS2	76	50.000	Tupaia_belangeri
ENSCSAVG00000004988	-	86	55.556	ENSTTRG00000013026	IARS2	83	55.556	Tursiops_truncatus
ENSCSAVG00000004988	-	99	47.739	ENSUAMG00000020811	IARS2	94	43.456	Ursus_americanus
ENSCSAVG00000004988	-	74	55.405	ENSUMAG00000022077	IARS2	90	54.545	Ursus_maritimus
ENSCSAVG00000004988	-	95	46.338	ENSVPAG00000008913	IARS2	99	41.860	Vicugna_pacos
ENSCSAVG00000004988	-	99	47.268	ENSVVUG00000012804	IARS2	94	43.091	Vulpes_vulpes
ENSCSAVG00000004988	-	99	48.808	ENSXETG00000002726	iars2	96	44.264	Xenopus_tropicalis
ENSCSAVG00000004988	-	100	47.733	ENSXCOG00000011279	iars2	94	43.527	Xiphophorus_couchianus
ENSCSAVG00000004988	-	100	47.859	ENSXMAG00000018636	iars2	94	43.629	Xiphophorus_maculatus