EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000005003 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
9436 bases
Position
chrreftig_65:425548-434983
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000008424MA3PF02847.171.1e-3412
ENSCSAVP00000008424MA3PF02847.171.1e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000008533-1969-ENSCSAVP00000008424460 (aa)-H2YSW4
Gene Model
Click here to download ENSCSAVG00000005003's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005003's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000005003-9740.393ENSG00000150593PDCD49340.659Homo_sapiens
ENSCSAVG00000005003-9742.384ENSAPOG00000018171pdcd4a9742.605Acanthochromis_polyacanthus
ENSCSAVG00000005003-9742.763ENSAPOG00000011195pdcd4b9142.763Acanthochromis_polyacanthus
ENSCSAVG00000005003-9740.741ENSAMEG00000015646PDCD49141.009Ailuropoda_melanoleuca
ENSCSAVG00000005003-9641.685ENSACIG00000016432pdcd4b9141.685Amphilophus_citrinellus
ENSCSAVG00000005003-9742.316ENSACIG00000020573pdcd4a9442.350Amphilophus_citrinellus
ENSCSAVG00000005003-9742.982ENSAOCG00000018427pdcd4b9142.982Amphiprion_ocellaris
ENSCSAVG00000005003-9742.605ENSAOCG00000005375pdcd4a9841.648Amphiprion_ocellaris
ENSCSAVG00000005003-9742.982ENSAPEG00000005735pdcd4b9142.982Amphiprion_percula
ENSCSAVG00000005003-9742.605ENSAPEG00000015119pdcd4a9343.046Amphiprion_percula
ENSCSAVG00000005003-9742.478ENSATEG00000016227pdcd4a9143.046Anabas_testudineus
ENSCSAVG00000005003-9639.468ENSATEG00000008734pdcd4b9139.468Anabas_testudineus
ENSCSAVG00000005003-9740.889ENSAPLG00000003137PDCD49140.749Anas_platyrhynchos
ENSCSAVG00000005003-9741.778ENSACAG00000015761PDCD49141.778Anolis_carolinensis
ENSCSAVG00000005003-9442.759ENSACAG00000000420-9544.118Anolis_carolinensis
ENSCSAVG00000005003-9740.830ENSANAG00000031719PDCD49341.099Aotus_nancymaae
ENSCSAVG00000005003-9742.920ENSACLG00000021040pdcd4a9343.488Astatotilapia_calliptera
ENSCSAVG00000005003-9642.222ENSACLG00000025687pdcd4b8942.222Astatotilapia_calliptera
ENSCSAVG00000005003-9738.938ENSAMXG00000004515pdcd4b9038.938Astyanax_mexicanus
ENSCSAVG00000005003-9741.814ENSAMXG00000030253pdcd4a9142.478Astyanax_mexicanus
ENSCSAVG00000005003-9739.823ENSBTAG00000019434PDCD49340.089Bos_taurus
ENSCSAVG00000005003-9740.830ENSCJAG00000018795PDCD49341.099Callithrix_jacchus
ENSCSAVG00000005003-9740.652ENSCAFG00000010807PDCD49140.919Canis_familiaris
ENSCSAVG00000005003-9740.830ENSCAFG00020011940PDCD49141.099Canis_lupus_dingo
ENSCSAVG00000005003-9739.823ENSCHIG00000022248PDCD49240.089Capra_hircus
ENSCSAVG00000005003-9740.830ENSTSYG00000014536PDCD49441.099Carlito_syrichta
ENSCSAVG00000005003-9737.582ENSCAPG00000014937PDCD49137.582Cavia_aperea
ENSCSAVG00000005003-9741.319ENSCPOG00000007956PDCD49141.099Cavia_porcellus
ENSCSAVG00000005003-9740.830ENSCCAG00000031181PDCD49341.099Cebus_capucinus
ENSCSAVG00000005003-9740.611ENSCATG00000034630PDCD49440.879Cercocebus_atys
ENSCSAVG00000005003-9740.611ENSCLAG00000001136PDCD49140.879Chinchilla_lanigera
ENSCSAVG00000005003-9740.830ENSCSAG00000005152PDCD49141.099Chlorocebus_sabaeus
ENSCSAVG00000005003-9732.314ENSCHOG00000007638PDCD49132.747Choloepus_hoffmanni
ENSCSAVG00000005003-9740.969ENSCPBG00000012844PDCD49140.749Chrysemys_picta_bellii
ENSCSAVG00000005003-9541.950ENSCPBG00000024450-9043.400Chrysemys_picta_bellii
ENSCSAVG00000005003-10081.522ENSCING00000013216-9381.522Ciona_intestinalis
ENSCSAVG00000005003-9740.611ENSCANG00000027874PDCD49340.879Colobus_angolensis_palliatus
ENSCSAVG00000005003-9741.048ENSCGRG00001007322Pdcd49141.319Cricetulus_griseus_chok1gshd
ENSCSAVG00000005003-9741.048ENSCGRG00000017491Pdcd49441.319Cricetulus_griseus_crigri
ENSCSAVG00000005003-9741.907ENSCSEG00000002907pdcd4a9142.222Cynoglossus_semilaevis
ENSCSAVG00000005003-9644.395ENSCSEG00000012126pdcd4b8944.395Cynoglossus_semilaevis
ENSCSAVG00000005003-9642.377ENSCVAG00000021740pdcd4b9042.478Cyprinodon_variegatus
ENSCSAVG00000005003-7643.466ENSCVAG00000003035pdcd4a9143.111Cyprinodon_variegatus
ENSCSAVG00000005003-9741.485ENSDARG00000041022pdcd4b9141.485Danio_rerio
ENSCSAVG00000005003-9742.699ENSDARG00000021702pdcd4a9142.699Danio_rerio
ENSCSAVG00000005003-9740.741ENSDNOG00000009494PDCD49141.009Dasypus_novemcinctus
ENSCSAVG00000005003-9741.048ENSDORG00000002615Pdcd49341.319Dipodomys_ordii
ENSCSAVG00000005003-7636.056FBgn0030520Pdcd46635.775Drosophila_melanogaster
ENSCSAVG00000005003-9737.802ENSETEG00000013056PDCD49137.802Echinops_telfairi
ENSCSAVG00000005003-8839.259ENSEBUG00000009505pdcd4a9639.035Eptatretus_burgeri
ENSCSAVG00000005003-9740.830ENSEASG00005014903PDCD49141.099Equus_asinus_asinus
ENSCSAVG00000005003-9740.830ENSECAG00000020935PDCD49141.099Equus_caballus
ENSCSAVG00000005003-6537.458ENSEEUG00000011674-5937.458Erinaceus_europaeus
ENSCSAVG00000005003-8845.926ENSELUG00000024343pdcd4a9644.150Esox_lucius
ENSCSAVG00000005003-9640.940ENSELUG00000022960pdcd4b8940.716Esox_lucius
ENSCSAVG00000005003-9741.048ENSFCAG00000011894PDCD49341.319Felis_catus
ENSCSAVG00000005003-9739.956ENSFALG00000002279PDCD49139.956Ficedula_albicollis
ENSCSAVG00000005003-9741.048ENSFDAG00000000911PDCD49141.319Fukomys_damarensis
ENSCSAVG00000005003-9742.667ENSFHEG00000013043pdcd4b8742.667Fundulus_heteroclitus
ENSCSAVG00000005003-7643.182ENSFHEG00000021625pdcd4a9142.048Fundulus_heteroclitus
ENSCSAVG00000005003-9642.058ENSGMOG00000014693pdcd4b8842.058Gadus_morhua
ENSCSAVG00000005003-9741.501ENSGMOG00000017926pdcd4a9342.094Gadus_morhua
ENSCSAVG00000005003-9740.889ENSGALG00000008700PDCD49140.889Gallus_gallus
ENSCSAVG00000005003-6242.509ENSGALG00000049949-7039.241Gallus_gallus
ENSCSAVG00000005003-8944.175ENSGAFG00000005779pdcd4a9143.778Gambusia_affinis
ENSCSAVG00000005003-9943.074ENSGAFG00000016780pdcd4b8142.981Gambusia_affinis
ENSCSAVG00000005003-9741.372ENSGACG00000017601pdcd4a9142.163Gasterosteus_aculeatus
ENSCSAVG00000005003-9642.377ENSGACG00000018691pdcd4b8942.377Gasterosteus_aculeatus
ENSCSAVG00000005003-9741.333ENSGAGG00000011123PDCD49140.487Gopherus_agassizii
ENSCSAVG00000005003-9740.611ENSGGOG00000025550PDCD49340.879Gorilla_gorilla
ENSCSAVG00000005003-9742.920ENSHBUG00000010532pdcd4a9343.488Haplochromis_burtoni
ENSCSAVG00000005003-9642.444ENSHBUG00000016801pdcd4b8942.444Haplochromis_burtoni
ENSCSAVG00000005003-9739.035ENSHGLG00000010690-9039.514Heterocephalus_glaber_female
ENSCSAVG00000005003-9233.411ENSHGLG00000001144-9733.411Heterocephalus_glaber_female
ENSCSAVG00000005003-9741.048ENSHGLG00100016731PDCD49241.319Heterocephalus_glaber_male
ENSCSAVG00000005003-9742.444ENSHCOG00000001710pdcd4b9042.444Hippocampus_comes
ENSCSAVG00000005003-9742.478ENSHCOG00000020305pdcd4a9142.478Hippocampus_comes
ENSCSAVG00000005003-9441.723ENSIPUG00000010696pdcd4b8841.497Ictalurus_punctatus
ENSCSAVG00000005003-8843.415ENSIPUG00000002299pdcd4a9142.699Ictalurus_punctatus
ENSCSAVG00000005003-9741.048ENSSTOG00000015625PDCD49141.319Ictidomys_tridecemlineatus
ENSCSAVG00000005003-9740.175ENSJJAG00000022140Pdcd49140.440Jaculus_jaculus
ENSCSAVG00000005003-9643.722ENSKMAG00000020343pdcd4b8943.805Kryptolebias_marmoratus
ENSCSAVG00000005003-8444.103ENSKMAG00000001092pdcd4a9142.572Kryptolebias_marmoratus
ENSCSAVG00000005003-9742.035ENSLBEG00000020785pdcd4a9442.222Labrus_bergylta
ENSCSAVG00000005003-9640.757ENSLBEG00000025123pdcd4b8940.757Labrus_bergylta
ENSCSAVG00000005003-8745.865ENSLACG00000013271PDCD49142.763Latimeria_chalumnae
ENSCSAVG00000005003-7640.782ENSLOCG00000002395pdcd4a9440.782Lepisosteus_oculatus
ENSCSAVG00000005003-9443.021ENSLOCG00000012312pdcd4b8742.630Lepisosteus_oculatus
ENSCSAVG00000005003-9740.618ENSLAFG00000014885PDCD49140.889Loxodonta_africana
ENSCSAVG00000005003-9740.611ENSMFAG00000001786PDCD49340.879Macaca_fascicularis
ENSCSAVG00000005003-9740.611ENSMMUG00000017204PDCD49841.137Macaca_mulatta
ENSCSAVG00000005003-9740.611ENSMNEG00000043104PDCD49340.879Macaca_nemestrina
ENSCSAVG00000005003-9740.611ENSMLEG00000035966PDCD49340.879Mandrillus_leucophaeus
ENSCSAVG00000005003-9442.563ENSMAMG00000014502pdcd4b9942.105Mastacembelus_armatus
ENSCSAVG00000005003-9741.871ENSMAMG00000016154pdcd4a9141.871Mastacembelus_armatus
ENSCSAVG00000005003-9742.920ENSMZEG00005019782pdcd4a9143.488Maylandia_zebra
ENSCSAVG00000005003-9642.222ENSMZEG00005003005pdcd4b8942.222Maylandia_zebra
ENSCSAVG00000005003-9741.333ENSMGAG00000010847PDCD49141.333Meleagris_gallopavo
ENSCSAVG00000005003-9740.611ENSMAUG00000011866Pdcd49140.879Mesocricetus_auratus
ENSCSAVG00000005003-9740.611ENSMICG00000008747PDCD49340.879Microcebus_murinus
ENSCSAVG00000005003-9740.611ENSMOCG00000022153Pdcd49140.879Microtus_ochrogaster
ENSCSAVG00000005003-9742.731ENSMMOG00000021600pdcd4b9842.731Mola_mola
ENSCSAVG00000005003-8445.128ENSMMOG00000006425pdcd4a9842.377Mola_mola
ENSCSAVG00000005003-9740.611ENSMODG00000010390PDCD49140.879Monodelphis_domestica
ENSCSAVG00000005003-9741.871ENSMALG00000001597pdcd4a9142.000Monopterus_albus
ENSCSAVG00000005003-8743.284ENSMALG00000001132pdcd4b8942.597Monopterus_albus
ENSCSAVG00000005003-9741.485MGP_CAROLIEiJ_G0023076Pdcd49141.758Mus_caroli
ENSCSAVG00000005003-9741.485ENSMUSG00000024975Pdcd49141.758Mus_musculus
ENSCSAVG00000005003-9741.485MGP_PahariEiJ_G0014564Pdcd49141.758Mus_pahari
ENSCSAVG00000005003-9741.485MGP_SPRETEiJ_G0023997Pdcd49141.758Mus_spretus
ENSCSAVG00000005003-9740.830ENSMPUG00000002065PDCD49141.099Mustela_putorius_furo
ENSCSAVG00000005003-9740.830ENSMLUG00000013798PDCD49141.099Myotis_lucifugus
ENSCSAVG00000005003-9741.485ENSNGAG00000022282Pdcd49341.758Nannospalax_galili
ENSCSAVG00000005003-9742.952ENSNBRG00000013163pdcd4a9743.488Neolamprologus_brichardi
ENSCSAVG00000005003-9642.222ENSNBRG00000003325pdcd4b8942.000Neolamprologus_brichardi
ENSCSAVG00000005003-9740.175ENSNLEG00000015556PDCD49340.440Nomascus_leucogenys
ENSCSAVG00000005003-6044.175ENSMEUG00000001531-5844.175Notamacropus_eugenii
ENSCSAVG00000005003-9740.830ENSOPRG00000015442PDCD49141.099Ochotona_princeps
ENSCSAVG00000005003-9740.659ENSODEG00000009436PDCD49140.440Octodon_degus
ENSCSAVG00000005003-9642.889ENSONIG00000016289pdcd4b8942.889Oreochromis_niloticus
ENSCSAVG00000005003-9743.207ENSONIG00000017552pdcd4a9143.681Oreochromis_niloticus
ENSCSAVG00000005003-9740.611ENSOANG00000001593PDCD49140.879Ornithorhynchus_anatinus
ENSCSAVG00000005003-9740.830ENSOCUG00000016822PDCD49141.099Oryctolagus_cuniculus
ENSCSAVG00000005003-8445.897ENSORLG00000006416pdcd4a9243.584Oryzias_latipes
ENSCSAVG00000005003-8741.975ENSORLG00000015298pdcd4b9541.031Oryzias_latipes
ENSCSAVG00000005003-8445.897ENSORLG00020021241pdcd4a9243.584Oryzias_latipes_hni
ENSCSAVG00000005003-8742.716ENSORLG00020017175pdcd4b8941.704Oryzias_latipes_hni
ENSCSAVG00000005003-8445.897ENSORLG00015021438pdcd4a9243.363Oryzias_latipes_hsok
ENSCSAVG00000005003-8742.716ENSORLG00015017839pdcd4b8941.704Oryzias_latipes_hsok
ENSCSAVG00000005003-8444.872ENSOMEG00000006883pdcd4a9242.384Oryzias_melastigma
ENSCSAVG00000005003-8744.198ENSOMEG00000006923pdcd4b8942.825Oryzias_melastigma
ENSCSAVG00000005003-9740.830ENSOGAG00000012583PDCD49141.099Otolemur_garnettii
ENSCSAVG00000005003-9739.823ENSOARG00000010432PDCD49140.089Ovis_aries
ENSCSAVG00000005003-9740.611ENSPPAG00000041002PDCD49340.879Pan_paniscus
ENSCSAVG00000005003-9741.048ENSPPRG00000009147PDCD49341.319Panthera_pardus
ENSCSAVG00000005003-9741.048ENSPTIG00000010679PDCD49341.319Panthera_tigris_altaica
ENSCSAVG00000005003-9740.611ENSPTRG00000002940PDCD49440.879Pan_troglodytes
ENSCSAVG00000005003-9740.611ENSPANG00000020809PDCD49440.879Papio_anubis
ENSCSAVG00000005003-9743.778ENSPKIG00000011507pdcd4a9743.778Paramormyrops_kingsleyae
ENSCSAVG00000005003-8445.641ENSPKIG00000017390pdcd4a9543.202Paramormyrops_kingsleyae
ENSCSAVG00000005003-9742.444ENSPKIG00000017462pdcd4b9142.444Paramormyrops_kingsleyae
ENSCSAVG00000005003-9641.295ENSPSIG00000010097PDCD49041.071Pelodiscus_sinensis
ENSCSAVG00000005003-9741.280ENSPMGG00000009956pdcd4a9141.593Periophthalmus_magnuspinnatus
ENSCSAVG00000005003-9237.412ENSPMGG00000002938pdcd4b8737.136Periophthalmus_magnuspinnatus
ENSCSAVG00000005003-9740.393ENSPEMG00000002505Pdcd49140.659Peromyscus_maniculatus_bairdii
ENSCSAVG00000005003-9740.611ENSPCIG00000000171PDCD49140.879Phascolarctos_cinereus
ENSCSAVG00000005003-9743.077ENSPFOG00000005006pdcd4b9043.077Poecilia_formosa
ENSCSAVG00000005003-7643.182ENSPFOG00000011856pdcd4a9143.488Poecilia_formosa
ENSCSAVG00000005003-9743.363ENSPLAG00000010423pdcd4b9043.363Poecilia_latipinna
ENSCSAVG00000005003-7643.466ENSPLAG00000015991pdcd4a9143.709Poecilia_latipinna
ENSCSAVG00000005003-7643.466ENSPMEG00000018352pdcd4a9143.709Poecilia_mexicana
ENSCSAVG00000005003-9743.363ENSPMEG00000006444pdcd4b9743.363Poecilia_mexicana
ENSCSAVG00000005003-9743.142ENSPREG00000000296pdcd4b9043.142Poecilia_reticulata
ENSCSAVG00000005003-7642.898ENSPREG00000005622pdcd4a9843.267Poecilia_reticulata
ENSCSAVG00000005003-9740.308ENSPPYG00000002649PDCD49140.576Pongo_abelii
ENSCSAVG00000005003-9737.118ENSPCAG00000014164PDCD49137.582Procavia_capensis
ENSCSAVG00000005003-9740.044ENSPCOG00000021133PDCD49440.308Propithecus_coquereli
ENSCSAVG00000005003-9740.393ENSPVAG00000016247PDCD49140.659Pteropus_vampyrus
ENSCSAVG00000005003-9642.444ENSPNYG00000002060pdcd4b8942.444Pundamilia_nyererei
ENSCSAVG00000005003-9742.920ENSPNYG00000009383pdcd4a9143.488Pundamilia_nyererei
ENSCSAVG00000005003-9739.520ENSPNAG00000018427pdcd4b9139.560Pygocentrus_nattereri
ENSCSAVG00000005003-9741.333ENSPNAG00000011656pdcd4a9141.333Pygocentrus_nattereri
ENSCSAVG00000005003-9741.485ENSRNOG00000014779Pdcd49141.758Rattus_norvegicus
ENSCSAVG00000005003-9638.901ENSRBIG00000036033PDCD49239.318Rhinopithecus_bieti
ENSCSAVG00000005003-9740.611ENSRROG00000042371PDCD49340.879Rhinopithecus_roxellana
ENSCSAVG00000005003-9740.830ENSSBOG00000026392PDCD49341.099Saimiri_boliviensis_boliviensis
ENSCSAVG00000005003-9740.611ENSSHAG00000012060PDCD49140.879Sarcophilus_harrisii
ENSCSAVG00000005003-9742.222ENSSFOG00015008116pdcd49142.222Scleropages_formosus
ENSCSAVG00000005003-9744.124ENSSFOG00015018958pdcd4a9144.124Scleropages_formosus
ENSCSAVG00000005003-9744.889ENSSFOG00015017220pdcd4a9244.889Scleropages_formosus
ENSCSAVG00000005003-9643.778ENSSMAG00000001335pdcd4b8943.778Scophthalmus_maximus
ENSCSAVG00000005003-9741.228ENSSMAG00000007600pdcd4a9141.648Scophthalmus_maximus
ENSCSAVG00000005003-9742.316ENSSDUG00000002569pdcd4a9142.826Seriola_dumerili
ENSCSAVG00000005003-9642.825ENSSDUG00000010112pdcd4b8942.825Seriola_dumerili
ENSCSAVG00000005003-9742.316ENSSLDG00000016547pdcd4a9142.826Seriola_lalandi_dorsalis
ENSCSAVG00000005003-9642.825ENSSLDG00000012296pdcd4b8942.825Seriola_lalandi_dorsalis
ENSCSAVG00000005003-9737.665ENSSARG00000008245PDCD49138.137Sorex_araneus
ENSCSAVG00000005003-9740.889ENSSPUG00000004443PDCD49140.889Sphenodon_punctatus
ENSCSAVG00000005003-9742.982ENSSPAG00000005146pdcd4b9142.982Stegastes_partitus
ENSCSAVG00000005003-9741.907ENSSPAG00000000564pdcd4a9342.605Stegastes_partitus
ENSCSAVG00000005003-9740.308ENSSSCG00000010627PDCD49240.576Sus_scrofa
ENSCSAVG00000005003-5335.484ENSTGUG00000015607-8935.484Taeniopygia_guttata
ENSCSAVG00000005003-9739.956ENSTGUG00000010667-9139.956Taeniopygia_guttata
ENSCSAVG00000005003-9742.605ENSTRUG00000002085pdcd4a9342.605Takifugu_rubripes
ENSCSAVG00000005003-9642.022ENSTRUG00000007652pdcd4b8942.022Takifugu_rubripes
ENSCSAVG00000005003-9742.035ENSTNIG00000018044pdcd4a9442.035Tetraodon_nigroviridis
ENSCSAVG00000005003-9642.188ENSTNIG00000010581pdcd4b8942.188Tetraodon_nigroviridis
ENSCSAVG00000005003-9738.646ENSTBEG00000000362PDCD49139.121Tupaia_belangeri
ENSCSAVG00000005003-9738.987ENSTTRG00000006972PDCD49139.468Tursiops_truncatus
ENSCSAVG00000005003-9740.830ENSUAMG00000024332PDCD49441.099Ursus_americanus
ENSCSAVG00000005003-8651.852ENSUMAG00000023745PDCD48651.852Ursus_maritimus
ENSCSAVG00000005003-9740.481ENSVPAG00000001758PDCD49141.099Vicugna_pacos
ENSCSAVG00000005003-9740.830ENSVVUG00000007900PDCD49141.099Vulpes_vulpes
ENSCSAVG00000005003-9740.618ENSXETG00000025248pdcd49241.111Xenopus_tropicalis
ENSCSAVG00000005003-5541.502ENSXETG00000002778-9241.502Xenopus_tropicalis
ENSCSAVG00000005003-9643.722ENSXCOG00000014651pdcd4b9543.722Xiphophorus_couchianus
ENSCSAVG00000005003-8943.932ENSXCOG00000011222pdcd4a9943.556Xiphophorus_couchianus
ENSCSAVG00000005003-9643.722ENSXMAG00000006928pdcd4b8943.722Xiphophorus_maculatus
ENSCSAVG00000005003-8944.175ENSXMAG00000005480pdcd4a9143.778Xiphophorus_maculatus

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