EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005063 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4773 bases
Position: chrreftig_155:454259-459031
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008527	SF3a60_bindingd	PF12108.8	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008637	-	1737	-	ENSCSAVP00000008527	499 (aa)	-	H2YT67

Gene Model

Click here to download ENSCSAVG00000005063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005063	-	100	67.864	ENSG00000183431	SF3A3	100	67.864	Homo_sapiens
ENSCSAVG00000005063	-	100	66.866	ENSAPOG00000015608	sf3a3	100	66.866	Acanthochromis_polyacanthus
ENSCSAVG00000005063	-	100	67.864	ENSAMEG00000001262	SF3A3	100	67.864	Ailuropoda_melanoleuca
ENSCSAVG00000005063	-	95	62.722	ENSACIG00000009061	sf3a3	99	62.722	Amphilophus_citrinellus
ENSCSAVG00000005063	-	100	66.866	ENSAOCG00000013954	sf3a3	100	66.866	Amphiprion_ocellaris
ENSCSAVG00000005063	-	100	66.866	ENSAPEG00000007297	sf3a3	100	66.866	Amphiprion_percula
ENSCSAVG00000005063	-	100	66.866	ENSATEG00000008754	sf3a3	100	66.866	Anabas_testudineus
ENSCSAVG00000005063	-	94	66.951	ENSAPLG00000014900	SF3A3	100	66.951	Anas_platyrhynchos
ENSCSAVG00000005063	-	100	66.866	ENSACAG00000017058	SF3A3	100	66.866	Anolis_carolinensis
ENSCSAVG00000005063	-	100	55.511	ENSANAG00000036903	-	100	53.908	Aotus_nancymaae
ENSCSAVG00000005063	-	99	65.462	ENSANAG00000014878	SF3A3	100	65.462	Aotus_nancymaae
ENSCSAVG00000005063	-	100	67.265	ENSACLG00000017977	sf3a3	100	67.265	Astatotilapia_calliptera
ENSCSAVG00000005063	-	100	67.864	ENSAMXG00000016855	sf3a3	87	67.864	Astyanax_mexicanus
ENSCSAVG00000005063	-	100	68.064	ENSBTAG00000007299	SF3A3	100	68.064	Bos_taurus
ENSCSAVG00000005063	-	100	51.697	WBGene00011758	T13H5.4	100	51.697	Caenorhabditis_elegans
ENSCSAVG00000005063	-	100	67.864	ENSCJAG00000002176	SF3A3	100	67.864	Callithrix_jacchus
ENSCSAVG00000005063	-	100	67.864	ENSCAFG00000003222	-	100	67.864	Canis_familiaris
ENSCSAVG00000005063	-	100	67.864	ENSCAFG00000000683	-	100	67.864	Canis_familiaris
ENSCSAVG00000005063	-	100	67.864	ENSCAFG00020006186	SF3A3	100	67.864	Canis_lupus_dingo
ENSCSAVG00000005063	-	100	68.064	ENSCHIG00000020638	SF3A3	100	68.064	Capra_hircus
ENSCSAVG00000005063	-	100	62.076	ENSTSYG00000008417	SF3A3	100	62.076	Carlito_syrichta
ENSCSAVG00000005063	-	85	43.578	ENSCAPG00000003466	SF3A3	100	44.725	Cavia_aperea
ENSCSAVG00000005063	-	100	68.064	ENSCPOG00000008660	SF3A3	100	68.064	Cavia_porcellus
ENSCSAVG00000005063	-	100	51.303	ENSCCAG00000034048	-	100	50.100	Cebus_capucinus
ENSCSAVG00000005063	-	100	67.864	ENSCCAG00000033732	SF3A3	100	67.864	Cebus_capucinus
ENSCSAVG00000005063	-	100	67.864	ENSCATG00000043496	SF3A3	100	67.864	Cercocebus_atys
ENSCSAVG00000005063	-	94	56.317	ENSCATG00000041660	-	100	58.244	Cercocebus_atys
ENSCSAVG00000005063	-	100	50.600	ENSCATG00000043537	-	100	51.200	Cercocebus_atys
ENSCSAVG00000005063	-	100	67.864	ENSCLAG00000010838	SF3A3	100	67.864	Chinchilla_lanigera
ENSCSAVG00000005063	-	95	67.227	ENSCSAG00000001120	SF3A3	100	67.227	Chlorocebus_sabaeus
ENSCSAVG00000005063	-	79	71.429	ENSCHOG00000006849	SF3A3	79	71.429	Choloepus_hoffmanni
ENSCSAVG00000005063	-	100	62.675	ENSCPBG00000018291	-	100	62.675	Chrysemys_picta_bellii
ENSCSAVG00000005063	-	63	49.524	ENSCPBG00000007472	-	80	49.524	Chrysemys_picta_bellii
ENSCSAVG00000005063	-	100	85.458	ENSCING00000002730	-	100	85.458	Ciona_intestinalis
ENSCSAVG00000005063	-	100	47.495	ENSCANG00000035535	-	100	47.809	Colobus_angolensis_palliatus
ENSCSAVG00000005063	-	100	67.864	ENSCANG00000042083	SF3A3	100	67.864	Colobus_angolensis_palliatus
ENSCSAVG00000005063	-	100	67.864	ENSCGRG00001011320	Sf3a3	100	67.864	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005063	-	100	67.864	ENSCGRG00000012156	Sf3a3	100	67.864	Cricetulus_griseus_crigri
ENSCSAVG00000005063	-	100	66.866	ENSCSEG00000010401	sf3a3	100	66.866	Cynoglossus_semilaevis
ENSCSAVG00000005063	-	94	65.245	ENSCVAG00000010239	sf3a3	95	65.245	Cyprinodon_variegatus
ENSCSAVG00000005063	-	100	67.465	ENSDARG00000100114	sf3a3	100	68.735	Danio_rerio
ENSCSAVG00000005063	-	91	67.615	ENSDNOG00000046628	SF3A3	99	67.615	Dasypus_novemcinctus
ENSCSAVG00000005063	-	100	68.263	ENSDORG00000008798	Sf3a3	100	68.263	Dipodomys_ordii
ENSCSAVG00000005063	-	100	58.696	FBgn0014366	noi	100	58.696	Drosophila_melanogaster
ENSCSAVG00000005063	-	100	66.600	ENSEBUG00000015411	sf3a3	92	67.197	Eptatretus_burgeri
ENSCSAVG00000005063	-	100	67.864	ENSEASG00005012906	SF3A3	100	67.864	Equus_asinus_asinus
ENSCSAVG00000005063	-	100	67.864	ENSECAG00000017333	SF3A3	100	67.864	Equus_caballus
ENSCSAVG00000005063	-	100	67.066	ENSELUG00000010024	sf3a3	100	67.066	Esox_lucius
ENSCSAVG00000005063	-	100	67.864	ENSFCAG00000027772	SF3A3	100	67.864	Felis_catus
ENSCSAVG00000005063	-	100	67.665	ENSFALG00000001003	SF3A3	100	67.665	Ficedula_albicollis
ENSCSAVG00000005063	-	100	68.064	ENSFDAG00000020908	SF3A3	100	68.064	Fukomys_damarensis
ENSCSAVG00000005063	-	100	66.267	ENSFHEG00000019107	sf3a3	100	66.267	Fundulus_heteroclitus
ENSCSAVG00000005063	-	100	66.866	ENSGMOG00000015540	sf3a3	100	66.866	Gadus_morhua
ENSCSAVG00000005063	-	100	67.465	ENSGALG00000001540	SF3A3	100	67.465	Gallus_gallus
ENSCSAVG00000005063	-	100	66.267	ENSGAFG00000002320	sf3a3	100	66.267	Gambusia_affinis
ENSCSAVG00000005063	-	100	67.265	ENSGACG00000007842	sf3a3	100	67.265	Gasterosteus_aculeatus
ENSCSAVG00000005063	-	100	67.265	ENSGAGG00000014980	SF3A3	100	67.265	Gopherus_agassizii
ENSCSAVG00000005063	-	100	67.864	ENSGGOG00000013928	SF3A3	100	67.864	Gorilla_gorilla
ENSCSAVG00000005063	-	100	51.703	ENSGGOG00000022611	-	100	51.904	Gorilla_gorilla
ENSCSAVG00000005063	-	100	67.265	ENSHBUG00000018158	sf3a3	100	67.265	Haplochromis_burtoni
ENSCSAVG00000005063	-	100	68.064	ENSHGLG00000012502	SF3A3	100	68.064	Heterocephalus_glaber_female
ENSCSAVG00000005063	-	100	68.064	ENSHGLG00100010546	SF3A3	100	68.064	Heterocephalus_glaber_male
ENSCSAVG00000005063	-	100	66.267	ENSHCOG00000015109	sf3a3	100	66.267	Hippocampus_comes
ENSCSAVG00000005063	-	100	67.465	ENSIPUG00000011603	sf3a3	100	67.465	Ictalurus_punctatus
ENSCSAVG00000005063	-	100	67.864	ENSSTOG00000001691	SF3A3	100	67.864	Ictidomys_tridecemlineatus
ENSCSAVG00000005063	-	100	68.064	ENSJJAG00000012404	Sf3a3	100	68.064	Jaculus_jaculus
ENSCSAVG00000005063	-	100	66.267	ENSKMAG00000007632	sf3a3	100	66.267	Kryptolebias_marmoratus
ENSCSAVG00000005063	-	100	61.753	ENSLBEG00000000816	sf3a3	100	61.753	Labrus_bergylta
ENSCSAVG00000005063	-	100	67.465	ENSLOCG00000003273	sf3a3	100	67.465	Lepisosteus_oculatus
ENSCSAVG00000005063	-	100	58.498	ENSLAFG00000008094	SF3A3	100	58.498	Loxodonta_africana
ENSCSAVG00000005063	-	100	67.864	ENSMFAG00000043047	SF3A3	100	67.864	Macaca_fascicularis
ENSCSAVG00000005063	-	94	54.371	ENSMFAG00000036706	-	100	56.290	Macaca_fascicularis
ENSCSAVG00000005063	-	100	53.800	ENSMMUG00000038820	-	100	55.800	Macaca_mulatta
ENSCSAVG00000005063	-	100	67.864	ENSMMUG00000023199	SF3A3	100	67.864	Macaca_mulatta
ENSCSAVG00000005063	-	100	67.864	ENSMNEG00000044291	SF3A3	100	67.864	Macaca_nemestrina
ENSCSAVG00000005063	-	94	54.371	ENSMNEG00000028686	-	100	56.503	Macaca_nemestrina
ENSCSAVG00000005063	-	100	57.058	ENSMLEG00000036714	-	100	58.847	Mandrillus_leucophaeus
ENSCSAVG00000005063	-	100	67.864	ENSMLEG00000030641	SF3A3	100	67.864	Mandrillus_leucophaeus
ENSCSAVG00000005063	-	100	50.000	ENSMLEG00000028631	-	100	50.600	Mandrillus_leucophaeus
ENSCSAVG00000005063	-	100	66.467	ENSMAMG00000001942	sf3a3	100	66.467	Mastacembelus_armatus
ENSCSAVG00000005063	-	100	67.265	ENSMZEG00005016987	sf3a3	100	67.265	Maylandia_zebra
ENSCSAVG00000005063	-	100	65.010	ENSMGAG00000002875	SF3A3	100	65.010	Meleagris_gallopavo
ENSCSAVG00000005063	-	100	63.473	ENSMICG00000043548	-	100	61.876	Microcebus_murinus
ENSCSAVG00000005063	-	100	64.930	ENSMICG00000001485	-	100	64.930	Microcebus_murinus
ENSCSAVG00000005063	-	91	65.721	ENSMICG00000026541	-	100	65.721	Microcebus_murinus
ENSCSAVG00000005063	-	100	65.669	ENSMOCG00000019939	-	100	65.868	Microtus_ochrogaster
ENSCSAVG00000005063	-	95	62.947	ENSMOCG00000014565	-	97	62.526	Microtus_ochrogaster
ENSCSAVG00000005063	-	100	67.465	ENSMMOG00000014307	sf3a3	100	67.465	Mola_mola
ENSCSAVG00000005063	-	100	65.070	ENSMODG00000024045	-	100	65.070	Monodelphis_domestica
ENSCSAVG00000005063	-	100	52.427	ENSMODG00000017729	-	100	52.233	Monodelphis_domestica
ENSCSAVG00000005063	-	100	67.066	ENSMALG00000004836	sf3a3	100	67.105	Monopterus_albus
ENSCSAVG00000005063	-	100	67.864	MGP_CAROLIEiJ_G0026449	Sf3a3	100	67.864	Mus_caroli
ENSCSAVG00000005063	-	100	67.864	ENSMUSG00000028902	Sf3a3	100	67.864	Mus_musculus
ENSCSAVG00000005063	-	100	63.872	MGP_PahariEiJ_G0028780	Sf3a3	100	63.872	Mus_pahari
ENSCSAVG00000005063	-	100	67.864	MGP_SPRETEiJ_G0027428	Sf3a3	100	67.864	Mus_spretus
ENSCSAVG00000005063	-	100	67.864	ENSMLUG00000000991	SF3A3	100	67.864	Myotis_lucifugus
ENSCSAVG00000005063	-	100	64.671	ENSNGAG00000018032	Sf3a3	100	64.671	Nannospalax_galili
ENSCSAVG00000005063	-	100	63.473	ENSNLEG00000011720	SF3A3	100	63.473	Nomascus_leucogenys
ENSCSAVG00000005063	-	100	68.064	ENSOPRG00000012785	SF3A3	100	68.064	Ochotona_princeps
ENSCSAVG00000005063	-	100	58.483	ENSODEG00000018393	-	100	58.683	Octodon_degus
ENSCSAVG00000005063	-	100	57.769	ENSODEG00000000937	-	100	58.167	Octodon_degus
ENSCSAVG00000005063	-	100	64.072	ENSODEG00000006854	-	100	66.467	Octodon_degus
ENSCSAVG00000005063	-	100	65.070	ENSODEG00000007470	-	100	65.070	Octodon_degus
ENSCSAVG00000005063	-	87	67.586	ENSONIG00000010296	sf3a3	100	67.586	Oreochromis_niloticus
ENSCSAVG00000005063	-	94	66.951	ENSOANG00000002473	SF3A3	100	66.951	Ornithorhynchus_anatinus
ENSCSAVG00000005063	-	100	68.064	ENSOCUG00000005407	SF3A3	100	68.064	Oryctolagus_cuniculus
ENSCSAVG00000005063	-	100	65.868	ENSORLG00000008175	sf3a3	100	65.868	Oryzias_latipes
ENSCSAVG00000005063	-	100	65.868	ENSORLG00020013708	sf3a3	100	65.868	Oryzias_latipes_hni
ENSCSAVG00000005063	-	100	65.868	ENSORLG00015004104	sf3a3	100	65.868	Oryzias_latipes_hsok
ENSCSAVG00000005063	-	100	66.068	ENSOMEG00000020177	sf3a3	100	66.068	Oryzias_melastigma
ENSCSAVG00000005063	-	100	68.064	ENSOARG00000019950	SF3A3	100	68.064	Ovis_aries
ENSCSAVG00000005063	-	100	67.864	ENSPPAG00000034066	SF3A3	100	67.864	Pan_paniscus
ENSCSAVG00000005063	-	100	51.703	ENSPPAG00000039955	-	100	51.904	Pan_paniscus
ENSCSAVG00000005063	-	100	67.864	ENSPPRG00000001258	SF3A3	100	67.864	Panthera_pardus
ENSCSAVG00000005063	-	100	67.864	ENSPTIG00000007515	SF3A3	100	67.864	Panthera_tigris_altaica
ENSCSAVG00000005063	-	100	51.303	ENSPTRG00000046013	-	100	51.503	Pan_troglodytes
ENSCSAVG00000005063	-	100	67.864	ENSPTRG00000000559	SF3A3	100	67.864	Pan_troglodytes
ENSCSAVG00000005063	-	100	58.683	ENSPANG00000029393	-	100	60.479	Papio_anubis
ENSCSAVG00000005063	-	86	69.412	ENSPANG00000031214	-	100	49.098	Papio_anubis
ENSCSAVG00000005063	-	100	67.864	ENSPANG00000021859	SF3A3	100	67.864	Papio_anubis
ENSCSAVG00000005063	-	100	66.467	ENSPKIG00000004719	sf3a3	100	66.467	Paramormyrops_kingsleyae
ENSCSAVG00000005063	-	100	66.402	ENSPSIG00000004273	SF3A3	100	66.402	Pelodiscus_sinensis
ENSCSAVG00000005063	-	92	65.368	ENSPMGG00000003610	sf3a3	95	65.368	Periophthalmus_magnuspinnatus
ENSCSAVG00000005063	-	100	67.864	ENSPEMG00000020805	Sf3a3	100	67.864	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005063	-	54	58.889	ENSPMAG00000001044	sf3a3	98	58.889	Petromyzon_marinus
ENSCSAVG00000005063	-	100	67.665	ENSPCIG00000025719	SF3A3	100	67.665	Phascolarctos_cinereus
ENSCSAVG00000005063	-	100	66.267	ENSPFOG00000005284	sf3a3	100	66.267	Poecilia_formosa
ENSCSAVG00000005063	-	99	63.783	ENSPLAG00000003979	sf3a3	92	63.783	Poecilia_latipinna
ENSCSAVG00000005063	-	78	58.779	ENSPMEG00000021132	sf3a3	88	58.779	Poecilia_mexicana
ENSCSAVG00000005063	-	100	66.068	ENSPREG00000013802	sf3a3	100	66.068	Poecilia_reticulata
ENSCSAVG00000005063	-	100	66.467	ENSPPYG00000001519	SF3A3	100	66.467	Pongo_abelii
ENSCSAVG00000005063	-	100	63.074	ENSPCAG00000010734	SF3A3	100	63.074	Procavia_capensis
ENSCSAVG00000005063	-	100	56.313	ENSPCOG00000017131	-	100	56.313	Propithecus_coquereli
ENSCSAVG00000005063	-	100	61.310	ENSPCOG00000020389	-	100	61.310	Propithecus_coquereli
ENSCSAVG00000005063	-	89	77.778	ENSPVAG00000010158	SF3A3	88	77.778	Pteropus_vampyrus
ENSCSAVG00000005063	-	100	67.265	ENSPNYG00000000786	sf3a3	100	67.265	Pundamilia_nyererei
ENSCSAVG00000005063	-	100	67.665	ENSPNAG00000010298	sf3a3	100	67.665	Pygocentrus_nattereri
ENSCSAVG00000005063	-	100	67.864	ENSRNOG00000007629	Sf3a3	100	67.864	Rattus_norvegicus
ENSCSAVG00000005063	-	100	50.501	ENSRBIG00000043833	-	100	50.501	Rhinopithecus_bieti
ENSCSAVG00000005063	-	100	67.864	ENSRBIG00000043567	SF3A3	100	67.864	Rhinopithecus_bieti
ENSCSAVG00000005063	-	100	52.894	ENSRBIG00000041123	-	100	53.094	Rhinopithecus_bieti
ENSCSAVG00000005063	-	94	55.675	ENSRROG00000032346	-	100	55.675	Rhinopithecus_roxellana
ENSCSAVG00000005063	-	100	67.864	ENSRROG00000033888	SF3A3	100	67.864	Rhinopithecus_roxellana
ENSCSAVG00000005063	-	93	68.142	ENSSBOG00000032688	SF3A3	100	55.489	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005063	-	100	52.104	ENSSBOG00000026932	-	100	51.703	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005063	-	90	67.991	ENSSHAG00000014530	SF3A3	100	67.991	Sarcophilus_harrisii
ENSCSAVG00000005063	-	100	67.265	ENSSFOG00015005975	sf3a3	100	67.265	Scleropages_formosus
ENSCSAVG00000005063	-	100	66.467	ENSSMAG00000020213	sf3a3	100	66.467	Scophthalmus_maximus
ENSCSAVG00000005063	-	100	64.870	ENSSDUG00000011590	sf3a3	100	64.870	Seriola_dumerili
ENSCSAVG00000005063	-	100	67.066	ENSSLDG00000020635	sf3a3	100	67.066	Seriola_lalandi_dorsalis
ENSCSAVG00000005063	-	100	67.665	ENSSPUG00000004010	SF3A3	100	67.665	Sphenodon_punctatus
ENSCSAVG00000005063	-	100	66.866	ENSSPAG00000018653	sf3a3	100	66.866	Stegastes_partitus
ENSCSAVG00000005063	-	100	67.864	ENSSSCG00000003643	SF3A3	100	67.864	Sus_scrofa
ENSCSAVG00000005063	-	87	68.276	ENSTGUG00000001466	SF3A3	100	68.119	Taeniopygia_guttata
ENSCSAVG00000005063	-	100	66.667	ENSTRUG00000009089	sf3a3	100	66.667	Takifugu_rubripes
ENSCSAVG00000005063	-	100	66.004	ENSTNIG00000009800	sf3a3	100	66.004	Tetraodon_nigroviridis
ENSCSAVG00000005063	-	100	59.281	ENSTBEG00000007614	SF3A3	100	59.281	Tupaia_belangeri
ENSCSAVG00000005063	-	100	67.665	ENSTTRG00000013519	SF3A3	100	67.665	Tursiops_truncatus
ENSCSAVG00000005063	-	100	67.864	ENSUAMG00000006134	SF3A3	100	67.864	Ursus_americanus
ENSCSAVG00000005063	-	100	67.864	ENSUMAG00000021250	SF3A3	100	67.864	Ursus_maritimus
ENSCSAVG00000005063	-	66	69.767	ENSVPAG00000004778	SF3A3	73	69.767	Vicugna_pacos
ENSCSAVG00000005063	-	100	64.870	ENSVVUG00000022908	SF3A3	100	64.870	Vulpes_vulpes
ENSCSAVG00000005063	-	100	67.131	ENSXETG00000022923	sf3a3	100	67.131	Xenopus_tropicalis
ENSCSAVG00000005063	-	100	66.267	ENSXMAG00000017165	sf3a3	100	66.267	Xiphophorus_maculatus