EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005076 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 874 bases
Position: chrreftig_67:310099-310972
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008542	DUF2465	PF10239.9	4.2e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008652	-	839	-	ENSCSAVP00000008542	221 (aa)	-	H2YT82

Gene Model

Click here to download ENSCSAVG00000005076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005076	-	67	53.642	ENSANAG00000024679	-	52	45.495	Aotus_nancymaae
ENSCSAVG00000005076	-	98	38.914	ENSCAFG00000005919	FAM98C	51	38.462	Canis_familiaris
ENSCSAVG00000005076	-	71	44.444	ENSCAFG00020017778	FAM98C	88	50.000	Canis_lupus_dingo
ENSCSAVG00000005076	-	63	41.549	ENSCAPG00000009838	-	92	40.845	Cavia_aperea
ENSCSAVG00000005076	-	67	52.980	ENSCAPG00000013955	-	73	52.532	Cavia_aperea
ENSCSAVG00000005076	-	63	40.845	ENSCPOG00000005585	-	92	40.845	Cavia_porcellus
ENSCSAVG00000005076	-	62	44.928	ENSCLAG00000011123	-	94	44.928	Chinchilla_lanigera
ENSCSAVG00000005076	-	69	40.127	ENSCSAG00000004058	FAM98C	78	40.127	Chlorocebus_sabaeus
ENSCSAVG00000005076	-	61	43.382	ENSCPBG00000008728	-	60	42.857	Chrysemys_picta_bellii
ENSCSAVG00000005076	-	96	53.333	ENSCING00000022149	-	59	55.417	Ciona_intestinalis
ENSCSAVG00000005076	-	69	40.127	ENSCANG00000026868	FAM98C	78	40.127	Colobus_angolensis_palliatus
ENSCSAVG00000005076	-	62	42.446	ENSCGRG00000011604	-	94	42.446	Cricetulus_griseus_crigri
ENSCSAVG00000005076	-	62	55.797	ENSCSEG00000004831	fam98b	51	45.714	Cynoglossus_semilaevis
ENSCSAVG00000005076	-	62	44.286	ENSDORG00000025449	-	93	43.972	Dipodomys_ordii
ENSCSAVG00000005076	-	62	47.101	ENSEASG00005002574	-	94	47.101	Equus_asinus_asinus
ENSCSAVG00000005076	-	63	42.254	ENSFDAG00000011093	-	92	42.254	Fukomys_damarensis
ENSCSAVG00000005076	-	61	55.474	ENSFHEG00000020445	fam98b	52	45.673	Fundulus_heteroclitus
ENSCSAVG00000005076	-	93	43.961	ENSGAFG00000019645	fam98b	52	44.550	Gambusia_affinis
ENSCSAVG00000005076	-	61	43.165	ENSHGLG00000017864	-	94	44.203	Heterocephalus_glaber_female
ENSCSAVG00000005076	-	61	43.165	ENSHGLG00100017695	-	94	44.203	Heterocephalus_glaber_male
ENSCSAVG00000005076	-	80	37.430	ENSLAFG00000020798	FAM98C	56	40.972	Loxodonta_africana
ENSCSAVG00000005076	-	67	49.669	ENSLAFG00000008165	FAM98B	53	42.534	Loxodonta_africana
ENSCSAVG00000005076	-	69	40.127	ENSMMUG00000020468	FAM98C	77	40.127	Macaca_mulatta
ENSCSAVG00000005076	-	69	40.127	ENSMLEG00000042221	FAM98C	78	40.127	Mandrillus_leucophaeus
ENSCSAVG00000005076	-	62	41.429	ENSMODG00000013175	-	57	41.429	Monodelphis_domestica
ENSCSAVG00000005076	-	67	41.060	MGP_CAROLIEiJ_G0029473	Fam98c	92	43.704	Mus_caroli
ENSCSAVG00000005076	-	67	53.289	MGP_CAROLIEiJ_G0024110	Fam98b	54	44.589	Mus_caroli
ENSCSAVG00000005076	-	67	41.060	ENSMUSG00000030590	Fam98c	92	43.704	Mus_musculus
ENSCSAVG00000005076	-	66	54.362	ENSMUSG00000027349	Fam98b	53	44.978	Mus_musculus
ENSCSAVG00000005076	-	66	42.177	MGP_PahariEiJ_G0012707	Fam98c	91	42.222	Mus_pahari
ENSCSAVG00000005076	-	67	41.722	MGP_SPRETEiJ_G0030569	Fam98c	51	40.650	Mus_spretus
ENSCSAVG00000005076	-	66	41.722	ENSMLUG00000026049	-	54	41.722	Myotis_lucifugus
ENSCSAVG00000005076	-	67	54.305	ENSNGAG00000009974	Fam98b	52	46.544	Nannospalax_galili
ENSCSAVG00000005076	-	62	44.928	ENSODEG00000015757	-	95	44.928	Octodon_degus
ENSCSAVG00000005076	-	61	54.015	ENSONIG00000004842	-	51	48.810	Oreochromis_niloticus
ENSCSAVG00000005076	-	67	41.447	ENSOCUG00000021073	-	79	41.420	Oryctolagus_cuniculus
ENSCSAVG00000005076	-	67	47.682	ENSOCUG00000001786	FAM98B	53	40.444	Oryctolagus_cuniculus
ENSCSAVG00000005076	-	55	57.724	ENSOMEG00000014478	-	82	55.396	Oryzias_melastigma
ENSCSAVG00000005076	-	61	56.204	ENSOGAG00000002751	FAM98A	50	50.575	Otolemur_garnettii
ENSCSAVG00000005076	-	61	55.474	ENSOGAG00000002801	FAM98B	53	44.292	Otolemur_garnettii
ENSCSAVG00000005076	-	63	55.245	ENSOARG00000020035	FAM98B	53	47.596	Ovis_aries
ENSCSAVG00000005076	-	59	46.970	ENSPTIG00000015909	-	89	46.970	Panthera_tigris_altaica
ENSCSAVG00000005076	-	67	52.318	ENSPANG00000019500	FAM98B	52	43.556	Papio_anubis
ENSCSAVG00000005076	-	76	54.070	ENSPKIG00000022087	FAM98B	55	54.070	Paramormyrops_kingsleyae
ENSCSAVG00000005076	-	63	55.634	ENSPSIG00000006551	FAM98B	53	53.459	Pelodiscus_sinensis
ENSCSAVG00000005076	-	61	58.394	ENSPMGG00000015340	fam98b	91	59.231	Periophthalmus_magnuspinnatus
ENSCSAVG00000005076	-	60	42.963	ENSPEMG00000018935	-	92	42.963	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005076	-	62	55.072	ENSPREG00000007461	fam98b	52	46.635	Poecilia_reticulata
ENSCSAVG00000005076	-	69	40.127	ENSRBIG00000036368	-	53	40.127	Rhinopithecus_bieti
ENSCSAVG00000005076	-	67	52.318	ENSRROG00000001210	-	66	50.898	Rhinopithecus_roxellana
ENSCSAVG00000005076	-	62	44.203	ENSSBOG00000034217	FAM98C	55	40.120	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005076	-	62	40.714	ENSSHAG00000002208	-	58	40.714	Sarcophilus_harrisii
ENSCSAVG00000005076	-	71	51.875	ENSSPUG00000019102	FAM98B	56	55.372	Sphenodon_punctatus
ENSCSAVG00000005076	-	50	61.062	ENSTTRG00000012175	FAM98B	50	45.370	Tursiops_truncatus
ENSCSAVG00000005076	-	94	43.396	ENSVPAG00000006604	FAM98B	52	46.119	Vicugna_pacos
ENSCSAVG00000005076	-	58	50.000	ENSVVUG00000013061	-	88	50.000	Vulpes_vulpes