EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000005120 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2866 bases
Position: chrreftig_73:444258-447123
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008606	MMR_HSR1	PF01926.23	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008716	-	966	-	ENSCSAVP00000008606	239 (aa)	-	H2YTE6

Gene Model

Click here to download ENSCSAVG00000005120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005120's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000005120	-	74	39.130	ENSCSAVG00000010348	-	86	37.791
ENSCSAVG00000005120	-	81	37.306	ENSCSAVG00000002088	-	100	35.211
ENSCSAVG00000005120	-	85	36.634	ENSCSAVG00000000160	-	94	36.634
ENSCSAVG00000005120	-	67	38.788	ENSCSAVG00000011162	-	80	38.788
ENSCSAVG00000005120	-	70	44.118	ENSCSAVG00000008684	-	73	43.506
ENSCSAVG00000005120	-	72	31.638	ENSCSAVG00000007813	-	63	31.098
ENSCSAVG00000005120	-	87	31.884	ENSCSAVG00000009128	-	89	31.122
ENSCSAVG00000005120	-	87	31.776	ENSCSAVG00000000613	-	85	30.542
ENSCSAVG00000005120	-	65	41.667	ENSCSAVG00000008995	-	97	41.667
ENSCSAVG00000005120	-	77	41.799	ENSCSAVG00000009147	-	92	41.799
ENSCSAVG00000005120	-	87	33.953	ENSCSAVG00000005689	-	90	32.178
ENSCSAVG00000005120	-	68	33.951	ENSCSAVG00000001356	-	67	33.951
ENSCSAVG00000005120	-	81	34.010	ENSCSAVG00000010245	-	54	38.411
ENSCSAVG00000005120	-	69	42.775	ENSCSAVG00000002804	-	77	41.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005120	-	70	46.429	WBGene00004275	rab-11.2	84	46.429	Caenorhabditis_elegans
ENSCSAVG00000005120	-	95	77.533	ENSCING00000005409	-	99	77.533	Ciona_intestinalis
ENSCSAVG00000005120	-	89	45.116	YER031C	YPT31	96	45.116	Saccharomyces_cerevisiae
ENSCSAVG00000005120	-	89	45.833	YGL210W	-	96	45.833	Saccharomyces_cerevisiae