EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005158 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 15061 bases
Position: chrreftig_551:55216-70276
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008685	zf-met	PF12874.7	2.3e-06	1	1
ENSCSAVP00000008686	zf-met	PF12874.7	2.3e-06	1	1
ENSCSAVP00000008687	zf-met	PF12874.7	2.7e-06	1	1
ENSCSAVP00000008688	zf-met	PF12874.7	2.8e-06	1	1
ENSCSAVP00000008685	zf-C2H2_jaz	PF12171.8	1.3e-06	1	1
ENSCSAVP00000008686	zf-C2H2_jaz	PF12171.8	1.3e-06	1	1
ENSCSAVP00000008687	zf-C2H2_jaz	PF12171.8	1.6e-06	1	1
ENSCSAVP00000008688	zf-C2H2_jaz	PF12171.8	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008798	-	1455	-	ENSCSAVP00000008688	484 (aa)	-	H2YTM8
ENSCSAVT00000008795	-	1280	-	ENSCSAVP00000008685	408 (aa)	-	H2YTM5
ENSCSAVT00000008796	-	1281	-	ENSCSAVP00000008686	412 (aa)	-	H2YTM6
ENSCSAVT00000008797	-	1444	-	ENSCSAVP00000008687	469 (aa)	-	H2YTM7

Gene Model

Click here to download ENSCSAVG00000005158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005158's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005158	-	99	43.585	ENSG00000173545	ZNF622	99	44.513	Homo_sapiens
ENSCSAVG00000005158	-	99	42.531	ENSAPOG00000018103	znf622	99	42.505	Acanthochromis_polyacanthus
ENSCSAVG00000005158	-	93	52.361	ENSAMEG00000015369	ZNF622	99	44.864	Ailuropoda_melanoleuca
ENSCSAVG00000005158	-	99	38.075	ENSACIG00000010939	znf622	99	37.959	Amphilophus_citrinellus
ENSCSAVG00000005158	-	99	41.633	ENSAOCG00000005659	znf622	99	41.935	Amphiprion_ocellaris
ENSCSAVG00000005158	-	99	41.837	ENSAPEG00000003157	znf622	99	42.769	Amphiprion_percula
ENSCSAVG00000005158	-	99	41.434	ENSATEG00000014287	znf622	99	42.430	Anabas_testudineus
ENSCSAVG00000005158	-	79	41.327	ENSAPLG00000006976	ZNF622	85	43.662	Anas_platyrhynchos
ENSCSAVG00000005158	-	99	43.271	ENSACAG00000000306	ZNF622	99	44.306	Anolis_carolinensis
ENSCSAVG00000005158	-	99	44.124	ENSANAG00000031551	-	99	45.625	Aotus_nancymaae
ENSCSAVG00000005158	-	99	41.250	ENSACLG00000024264	znf622	99	40.825	Astatotilapia_calliptera
ENSCSAVG00000005158	-	99	42.918	ENSAMXG00000019355	znf622	99	42.887	Astyanax_mexicanus
ENSCSAVG00000005158	-	99	43.333	ENSBTAG00000016441	ZNF622	92	43.958	Bos_taurus
ENSCSAVG00000005158	-	97	43.363	WBGene00015809	C16A3.4	93	43.103	Caenorhabditis_elegans
ENSCSAVG00000005158	-	99	43.182	ENSCJAG00000012047	ZNF622	99	44.764	Callithrix_jacchus
ENSCSAVG00000005158	-	99	43.685	ENSCAFG00000023607	ZNF622	99	44.885	Canis_familiaris
ENSCSAVG00000005158	-	82	54.852	ENSCAFG00020020158	ZNF622	99	45.175	Canis_lupus_dingo
ENSCSAVG00000005158	-	99	43.933	ENSCHIG00000007951	ZNF622	99	44.156	Capra_hircus
ENSCSAVG00000005158	-	99	42.159	ENSTSYG00000006612	ZNF622	99	42.857	Carlito_syrichta
ENSCSAVG00000005158	-	99	42.300	ENSCPOG00000002276	ZNF622	99	44.583	Cavia_porcellus
ENSCSAVG00000005158	-	99	44.398	ENSCCAG00000035492	ZNF622	99	45.021	Cebus_capucinus
ENSCSAVG00000005158	-	99	44.513	ENSCATG00000031254	ZNF622	99	44.513	Cercocebus_atys
ENSCSAVG00000005158	-	99	42.769	ENSCLAG00000011494	ZNF622	99	43.711	Chinchilla_lanigera
ENSCSAVG00000005158	-	99	44.124	ENSCSAG00000017262	ZNF622	99	44.536	Chlorocebus_sabaeus
ENSCSAVG00000005158	-	99	43.750	ENSCHOG00000010240	ZNF622	99	43.333	Choloepus_hoffmanni
ENSCSAVG00000005158	-	99	43.154	ENSCPBG00000021097	ZNF622	99	44.255	Chrysemys_picta_bellii
ENSCSAVG00000005158	-	64	87.000	ENSCING00000004045	-	98	63.636	Ciona_intestinalis
ENSCSAVG00000005158	-	99	43.892	ENSCANG00000034487	ZNF622	99	44.306	Colobus_angolensis_palliatus
ENSCSAVG00000005158	-	99	43.958	ENSCGRG00001024661	Zfp622	99	44.792	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005158	-	99	43.958	ENSCGRG00000010522	Zfp622	99	44.792	Cricetulus_griseus_crigri
ENSCSAVG00000005158	-	99	41.991	ENSCSEG00000007253	znf622	97	42.387	Cynoglossus_semilaevis
ENSCSAVG00000005158	-	99	41.290	ENSCVAG00000010440	znf622	99	41.529	Cyprinodon_variegatus
ENSCSAVG00000005158	-	99	42.437	ENSDARG00000014692	znf622	99	42.174	Danio_rerio
ENSCSAVG00000005158	-	99	43.271	ENSDNOG00000035990	ZNF622	99	44.215	Dasypus_novemcinctus
ENSCSAVG00000005158	-	99	44.328	ENSDORG00000000939	Zfp622	99	44.050	Dipodomys_ordii
ENSCSAVG00000005158	-	99	40.380	FBgn0030878	CG6769	99	39.344	Drosophila_melanogaster
ENSCSAVG00000005158	-	99	42.887	ENSETEG00000005697	ZNF622	99	43.558	Echinops_telfairi
ENSCSAVG00000005158	-	99	39.111	ENSEBUG00000012613	znf622	99	41.778	Eptatretus_burgeri
ENSCSAVG00000005158	-	99	43.320	ENSEASG00005007253	ZNF622	99	44.939	Equus_asinus_asinus
ENSCSAVG00000005158	-	99	43.548	ENSECAG00000020350	ZNF622	99	44.737	Equus_caballus
ENSCSAVG00000005158	-	99	38.105	ENSEEUG00000003500	ZNF622	99	39.040	Erinaceus_europaeus
ENSCSAVG00000005158	-	99	42.062	ENSELUG00000017844	znf622	99	41.803	Esox_lucius
ENSCSAVG00000005158	-	99	43.558	ENSFCAG00000018947	ZNF622	96	45.021	Felis_catus
ENSCSAVG00000005158	-	99	43.711	ENSFALG00000007501	ZNF622	99	43.121	Ficedula_albicollis
ENSCSAVG00000005158	-	99	43.777	ENSFDAG00000011699	ZNF622	99	44.397	Fukomys_damarensis
ENSCSAVG00000005158	-	99	43.711	ENSGALG00000037171	ZNF622	99	43.182	Gallus_gallus
ENSCSAVG00000005158	-	99	42.585	ENSGAFG00000018571	znf622	99	43.958	Gambusia_affinis
ENSCSAVG00000005158	-	99	39.785	ENSGAGG00000004519	ZNF622	99	39.831	Gopherus_agassizii
ENSCSAVG00000005158	-	99	43.093	ENSGGOG00000009831	ZNF622	99	44.948	Gorilla_gorilla
ENSCSAVG00000005158	-	99	40.956	ENSHBUG00000011685	znf622	99	41.393	Haplochromis_burtoni
ENSCSAVG00000005158	-	99	42.915	ENSHGLG00000007811	ZNF622	99	44.835	Heterocephalus_glaber_female
ENSCSAVG00000005158	-	99	43.232	ENSHGLG00100014160	ZNF622	99	44.330	Heterocephalus_glaber_male
ENSCSAVG00000005158	-	99	42.650	ENSHCOG00000011311	znf622	99	43.061	Hippocampus_comes
ENSCSAVG00000005158	-	99	44.086	ENSIPUG00000008147	znf622	99	44.699	Ictalurus_punctatus
ENSCSAVG00000005158	-	99	43.396	ENSSTOG00000000623	ZNF622	99	44.694	Ictidomys_tridecemlineatus
ENSCSAVG00000005158	-	99	43.685	ENSJJAG00000000941	Zfp622	99	43.299	Jaculus_jaculus
ENSCSAVG00000005158	-	99	41.344	ENSKMAG00000000706	znf622	99	41.649	Kryptolebias_marmoratus
ENSCSAVG00000005158	-	99	41.015	ENSLBEG00000020022	znf622	98	41.141	Labrus_bergylta
ENSCSAVG00000005158	-	99	43.595	ENSLAFG00000031794	ZNF622	99	43.004	Loxodonta_africana
ENSCSAVG00000005158	-	99	44.099	ENSMFAG00000034147	ZNF622	99	44.099	Macaca_fascicularis
ENSCSAVG00000005158	-	99	44.099	ENSMNEG00000036952	ZNF622	99	44.099	Macaca_nemestrina
ENSCSAVG00000005158	-	99	43.154	ENSMLEG00000040466	ZNF622	99	43.265	Mandrillus_leucophaeus
ENSCSAVG00000005158	-	99	42.204	ENSMAMG00000015936	znf622	99	42.460	Mastacembelus_armatus
ENSCSAVG00000005158	-	99	41.250	ENSMZEG00005000470	znf622	99	40.825	Maylandia_zebra
ENSCSAVG00000005158	-	81	39.086	ENSMGAG00000005719	ZNF622	88	43.360	Meleagris_gallopavo
ENSCSAVG00000005158	-	99	45.094	ENSMAUG00000010395	Zfp622	99	45.094	Mesocricetus_auratus
ENSCSAVG00000005158	-	99	43.035	ENSMICG00000010544	ZNF622	99	44.075	Microcebus_murinus
ENSCSAVG00000005158	-	99	43.633	ENSMOCG00000014111	-	99	44.468	Microtus_ochrogaster
ENSCSAVG00000005158	-	80	42.338	ENSMOCG00000001703	-	92	43.152	Microtus_ochrogaster
ENSCSAVG00000005158	-	99	42.348	ENSMMOG00000011233	znf622	99	42.348	Mola_mola
ENSCSAVG00000005158	-	99	44.375	ENSMODG00000003459	ZNF622	99	45.322	Monodelphis_domestica
ENSCSAVG00000005158	-	99	42.828	ENSMPUG00000011110	ZNF622	99	43.505	Mustela_putorius_furo
ENSCSAVG00000005158	-	99	40.726	ENSMLUG00000007088	ZNF622	99	41.309	Myotis_lucifugus
ENSCSAVG00000005158	-	99	42.797	ENSNGAG00000012958	Zfp622	99	44.167	Nannospalax_galili
ENSCSAVG00000005158	-	99	36.364	ENSNBRG00000016286	znf622	99	36.777	Neolamprologus_brichardi
ENSCSAVG00000005158	-	99	44.513	ENSNLEG00000011876	ZNF622	99	44.928	Nomascus_leucogenys
ENSCSAVG00000005158	-	99	42.650	ENSMEUG00000004399	ZNF622	99	42.886	Notamacropus_eugenii
ENSCSAVG00000005158	-	99	42.495	ENSOPRG00000007806	ZNF622	99	42.495	Ochotona_princeps
ENSCSAVG00000005158	-	99	39.381	ENSODEG00000001750	-	99	41.649	Octodon_degus
ENSCSAVG00000005158	-	99	42.259	ENSODEG00000004409	-	99	43.568	Octodon_degus
ENSCSAVG00000005158	-	99	42.259	ENSODEG00000001594	-	99	43.802	Octodon_degus
ENSCSAVG00000005158	-	99	41.004	ENSONIG00000012409	znf622	99	41.031	Oreochromis_niloticus
ENSCSAVG00000005158	-	99	43.064	ENSOCUG00000017508	ZNF622	99	44.835	Oryctolagus_cuniculus
ENSCSAVG00000005158	-	99	41.943	ENSORLG00000006337	znf622	99	41.447	Oryzias_latipes
ENSCSAVG00000005158	-	99	42.797	ENSORLG00020020228	znf622	99	42.227	Oryzias_latipes_hni
ENSCSAVG00000005158	-	99	42.384	ENSORLG00015019466	znf622	99	43.653	Oryzias_latipes_hsok
ENSCSAVG00000005158	-	99	41.807	ENSOMEG00000020165	znf622	99	42.620	Oryzias_melastigma
ENSCSAVG00000005158	-	91	42.793	ENSOGAG00000014834	ZNF622	100	42.793	Otolemur_garnettii
ENSCSAVG00000005158	-	99	42.827	ENSOARG00000013083	ZNF622	99	43.035	Ovis_aries
ENSCSAVG00000005158	-	99	43.892	ENSPPAG00000028322	ZNF622	99	44.720	Pan_paniscus
ENSCSAVG00000005158	-	99	43.496	ENSPPRG00000008393	-	99	44.536	Panthera_pardus
ENSCSAVG00000005158	-	61	36.688	ENSPPRG00000008274	-	94	39.203	Panthera_pardus
ENSCSAVG00000005158	-	99	43.326	ENSPTIG00000009603	ZNF622	99	44.813	Panthera_tigris_altaica
ENSCSAVG00000005158	-	99	43.154	ENSPTRG00000016743	ZNF622	99	44.928	Pan_troglodytes
ENSCSAVG00000005158	-	99	42.616	ENSPANG00000009355	ZNF622	99	43.033	Papio_anubis
ENSCSAVG00000005158	-	99	40.890	ENSPKIG00000008000	znf622	99	42.887	Paramormyrops_kingsleyae
ENSCSAVG00000005158	-	99	43.803	ENSPSIG00000017092	ZNF622	99	43.326	Pelodiscus_sinensis
ENSCSAVG00000005158	-	99	43.624	ENSPMGG00000009276	znf622	99	43.624	Periophthalmus_magnuspinnatus
ENSCSAVG00000005158	-	99	44.259	ENSPEMG00000019901	-	99	45.720	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005158	-	99	39.437	ENSPMAG00000000002	znf622	99	39.351	Petromyzon_marinus
ENSCSAVG00000005158	-	99	44.351	ENSPCIG00000025058	ZNF622	99	44.490	Phascolarctos_cinereus
ENSCSAVG00000005158	-	99	42.451	ENSPFOG00000001399	znf622	99	43.867	Poecilia_formosa
ENSCSAVG00000005158	-	99	42.982	ENSPLAG00000008990	znf622	95	43.629	Poecilia_latipinna
ENSCSAVG00000005158	-	99	43.424	ENSPMEG00000007146	znf622	99	43.633	Poecilia_mexicana
ENSCSAVG00000005158	-	99	43.220	ENSPREG00000020611	znf622	99	43.534	Poecilia_reticulata
ENSCSAVG00000005158	-	74	42.340	ENSPPYG00000029803	-	93	42.936	Pongo_abelii
ENSCSAVG00000005158	-	99	36.345	ENSPCAG00000002518	ZNF622	99	36.289	Procavia_capensis
ENSCSAVG00000005158	-	99	43.006	ENSPCOG00000020267	ZNF622	99	44.148	Propithecus_coquereli
ENSCSAVG00000005158	-	99	41.250	ENSPNYG00000016004	znf622	99	41.478	Pundamilia_nyererei
ENSCSAVG00000005158	-	99	43.841	ENSRNOG00000059443	LOC103690028	99	44.885	Rattus_norvegicus
ENSCSAVG00000005158	-	99	43.841	ENSRNOG00000010589	LOC103689968	99	44.885	Rattus_norvegicus
ENSCSAVG00000005158	-	99	44.421	ENSRBIG00000026260	ZNF622	99	44.628	Rhinopithecus_bieti
ENSCSAVG00000005158	-	99	44.421	ENSRROG00000033175	ZNF622	99	44.628	Rhinopithecus_roxellana
ENSCSAVG00000005158	-	99	42.387	ENSSBOG00000026590	ZNF622	99	44.259	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005158	-	99	41.408	ENSSHAG00000004315	ZNF622	99	41.633	Sarcophilus_harrisii
ENSCSAVG00000005158	-	99	43.299	ENSSFOG00015020484	znf622	99	43.443	Scleropages_formosus
ENSCSAVG00000005158	-	99	42.331	ENSSMAG00000004950	znf622	99	42.536	Scophthalmus_maximus
ENSCSAVG00000005158	-	99	41.667	ENSSDUG00000005265	znf622	99	41.903	Seriola_dumerili
ENSCSAVG00000005158	-	99	41.564	ENSSLDG00000001508	znf622	99	42.245	Seriola_lalandi_dorsalis
ENSCSAVG00000005158	-	99	42.918	ENSSPUG00000013414	ZNF622	99	42.828	Sphenodon_punctatus
ENSCSAVG00000005158	-	99	41.545	ENSSPAG00000003954	znf622	99	40.452	Stegastes_partitus
ENSCSAVG00000005158	-	99	42.394	ENSSSCG00000016793	ZNF622	99	42.653	Sus_scrofa
ENSCSAVG00000005158	-	99	42.739	ENSTGUG00000007377	ZNF622	99	43.121	Taeniopygia_guttata
ENSCSAVG00000005158	-	99	39.468	ENSTRUG00000001605	znf622	99	42.827	Takifugu_rubripes
ENSCSAVG00000005158	-	99	43.267	ENSTNIG00000008000	znf622	99	42.857	Tetraodon_nigroviridis
ENSCSAVG00000005158	-	99	44.283	ENSUAMG00000024162	ZNF622	99	45.094	Ursus_americanus
ENSCSAVG00000005158	-	99	44.283	ENSUMAG00000021715	ZNF622	99	45.094	Ursus_maritimus
ENSCSAVG00000005158	-	99	43.802	ENSXETG00000007539	znf622	99	43.505	Xenopus_tropicalis
ENSCSAVG00000005158	-	99	42.585	ENSXCOG00000019974	znf622	95	43.724	Xiphophorus_couchianus
ENSCSAVG00000005158	-	99	42.737	ENSXMAG00000006827	znf622	99	43.606	Xiphophorus_maculatus