EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005231 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1739 bases
Position: chrreftig_7:1785037-1786775
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008817	Ribosomal_L29e	PF01779.17	4.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000008930	-	262	-	ENSCSAVP00000008817	59 (aa)	-	H2YU07

Gene Model

Click here to download ENSCSAVG00000005231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005231	-	78	78.261	ENSG00000162244	RPL29	92	73.529	Homo_sapiens
ENSCSAVG00000005231	-	88	78.846	ENSAPOG00000002586	rpl29	81	78.846	Acanthochromis_polyacanthus
ENSCSAVG00000005231	-	88	80.769	ENSACIG00000018340	rpl29	81	80.769	Amphilophus_citrinellus
ENSCSAVG00000005231	-	88	80.769	ENSAOCG00000016652	rpl29	81	80.769	Amphiprion_ocellaris
ENSCSAVG00000005231	-	88	80.769	ENSAPEG00000005754	rpl29	81	80.769	Amphiprion_percula
ENSCSAVG00000005231	-	78	78.261	ENSACAG00000006888	RPL29	80	78.846	Anolis_carolinensis
ENSCSAVG00000005231	-	78	78.261	ENSANAG00000024147	-	77	63.043	Aotus_nancymaae
ENSCSAVG00000005231	-	88	78.846	ENSACLG00000017820	rpl29	81	78.846	Astatotilapia_calliptera
ENSCSAVG00000005231	-	100	75.410	ENSAMXG00000038794	rpl29	95	75.410	Astyanax_mexicanus
ENSCSAVG00000005231	-	88	69.231	WBGene00004443	rpl-29	84	69.231	Caenorhabditis_elegans
ENSCSAVG00000005231	-	78	78.261	ENSCJAG00000042339	-	77	63.043	Callithrix_jacchus
ENSCSAVG00000005231	-	78	78.261	ENSCCAG00000027980	-	80	60.417	Cebus_capucinus
ENSCSAVG00000005231	-	68	65.000	ENSCPBG00000016679	-	52	65.000	Chrysemys_picta_bellii
ENSCSAVG00000005231	-	98	87.931	ENSCING00000018496	-	100	87.931	Ciona_intestinalis
ENSCSAVG00000005231	-	78	78.261	ENSCGRG00001016452	-	76	78.846	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005231	-	85	78.000	ENSCSEG00000010267	rpl29	79	76.923	Cynoglossus_semilaevis
ENSCSAVG00000005231	-	85	80.000	ENSCVAG00000023098	rpl29	81	78.846	Cyprinodon_variegatus
ENSCSAVG00000005231	-	100	70.492	ENSDARG00000077717	rpl29	95	70.492	Danio_rerio
ENSCSAVG00000005231	-	85	62.000	FBgn0016726	RpL29	66	62.000	Drosophila_melanogaster
ENSCSAVG00000005231	-	73	69.767	ENSEASG00005005507	-	66	69.767	Equus_asinus_asinus
ENSCSAVG00000005231	-	88	76.923	ENSELUG00000015592	RL29	74	76.923	Esox_lucius
ENSCSAVG00000005231	-	73	55.814	ENSFCAG00000035470	-	58	54.545	Felis_catus
ENSCSAVG00000005231	-	92	62.963	ENSFCAG00000043006	-	67	62.963	Felis_catus
ENSCSAVG00000005231	-	78	80.435	ENSFALG00000008925	RPL29	76	80.769	Ficedula_albicollis
ENSCSAVG00000005231	-	88	78.846	ENSFHEG00000015425	rpl29	81	78.846	Fundulus_heteroclitus
ENSCSAVG00000005231	-	88	73.077	ENSGMOG00000003626	rpl29	70	71.698	Gadus_morhua
ENSCSAVG00000005231	-	78	80.435	ENSGALG00000026978	RPL29	73	80.769	Gallus_gallus
ENSCSAVG00000005231	-	88	78.846	ENSGAFG00000012868	rpl29	81	78.846	Gambusia_affinis
ENSCSAVG00000005231	-	88	75.000	ENSGACG00000007041	rpl29	68	75.000	Gasterosteus_aculeatus
ENSCSAVG00000005231	-	78	60.417	ENSGAGG00000024203	-	89	60.417	Gopherus_agassizii
ENSCSAVG00000005231	-	78	78.261	ENSGGOG00000024691	RPL29	62	70.270	Gorilla_gorilla
ENSCSAVG00000005231	-	90	77.358	ENSHBUG00000010519	rpl29	81	78.846	Haplochromis_burtoni
ENSCSAVG00000005231	-	85	82.000	ENSHCOG00000000478	rpl29	67	80.769	Hippocampus_comes
ENSCSAVG00000005231	-	88	82.692	ENSIPUG00000001196	rpl29	81	82.692	Ictalurus_punctatus
ENSCSAVG00000005231	-	88	78.846	ENSKMAG00000011291	rpl29	81	78.846	Kryptolebias_marmoratus
ENSCSAVG00000005231	-	88	75.000	ENSLBEG00000016213	rpl29	78	73.585	Labrus_bergylta
ENSCSAVG00000005231	-	90	73.585	ENSLACG00000018622	rpl29	83	73.585	Latimeria_chalumnae
ENSCSAVG00000005231	-	88	75.000	ENSLACG00000018031	-	78	73.585	Latimeria_chalumnae
ENSCSAVG00000005231	-	78	76.087	ENSLOCG00000013798	rpl29	80	76.923	Lepisosteus_oculatus
ENSCSAVG00000005231	-	88	78.846	ENSMAMG00000014274	rpl29	55	78.846	Mastacembelus_armatus
ENSCSAVG00000005231	-	88	78.846	ENSMZEG00005013519	rpl29	81	78.846	Maylandia_zebra
ENSCSAVG00000005231	-	78	80.435	ENSMGAG00000001213	RPL29	73	80.769	Meleagris_gallopavo
ENSCSAVG00000005231	-	83	69.388	ENSMICG00000049466	-	74	69.388	Microcebus_murinus
ENSCSAVG00000005231	-	88	76.923	ENSMMOG00000010430	rpl29	81	76.923	Mola_mola
ENSCSAVG00000005231	-	88	78.846	ENSMALG00000009023	rpl29	67	78.846	Monopterus_albus
ENSCSAVG00000005231	-	78	78.261	ENSMUSG00000048758	Rpl29	76	78.846	Mus_musculus
ENSCSAVG00000005231	-	88	78.846	ENSNBRG00000022109	rpl29	81	78.846	Neolamprologus_brichardi
ENSCSAVG00000005231	-	88	78.846	ENSONIG00000014377	rpl29	83	78.846	Oreochromis_niloticus
ENSCSAVG00000005231	-	88	78.846	ENSORLG00000023610	rpl29	55	78.846	Oryzias_latipes
ENSCSAVG00000005231	-	88	78.846	ENSORLG00020018665	rpl29	55	78.846	Oryzias_latipes_hni
ENSCSAVG00000005231	-	88	78.846	ENSORLG00015014455	rpl29	55	78.846	Oryzias_latipes_hsok
ENSCSAVG00000005231	-	88	78.846	ENSOMEG00000019919	rpl29	81	78.846	Oryzias_melastigma
ENSCSAVG00000005231	-	63	70.270	ENSPPAG00000037142	-	63	70.270	Pan_paniscus
ENSCSAVG00000005231	-	92	64.815	ENSPPRG00000011689	-	83	64.815	Panthera_pardus
ENSCSAVG00000005231	-	92	62.963	ENSPTIG00000011913	-	66	62.963	Panthera_tigris_altaica
ENSCSAVG00000005231	-	78	78.261	ENSPTRG00000043237	RPL29	63	70.270	Pan_troglodytes
ENSCSAVG00000005231	-	78	82.609	ENSPKIG00000025048	rpl29	79	82.692	Paramormyrops_kingsleyae
ENSCSAVG00000005231	-	78	78.261	ENSPSIG00000014699	RPL29	83	78.846	Pelodiscus_sinensis
ENSCSAVG00000005231	-	88	78.846	ENSPMGG00000005361	rpl29	76	78.846	Periophthalmus_magnuspinnatus
ENSCSAVG00000005231	-	88	78.846	ENSPFOG00000011385	rpl29	85	78.846	Poecilia_formosa
ENSCSAVG00000005231	-	85	78.000	ENSPLAG00000012042	rpl29	81	76.923	Poecilia_latipinna
ENSCSAVG00000005231	-	85	80.000	ENSPMEG00000018297	rpl29	81	78.846	Poecilia_mexicana
ENSCSAVG00000005231	-	85	80.000	ENSPREG00000007066	rpl29	81	78.846	Poecilia_reticulata
ENSCSAVG00000005231	-	88	78.846	ENSPNYG00000019481	rpl29	81	78.846	Pundamilia_nyererei
ENSCSAVG00000005231	-	100	72.131	ENSPNAG00000007550	rpl29	95	72.131	Pygocentrus_nattereri
ENSCSAVG00000005231	-	90	67.925	ENSRNOG00000025794	AABR07021239.1	71	67.925	Rattus_norvegicus
ENSCSAVG00000005231	-	78	73.913	YFR032C-A	RPL29	78	73.913	Saccharomyces_cerevisiae
ENSCSAVG00000005231	-	86	80.392	ENSSMAG00000013571	rpl29	80	80.392	Scophthalmus_maximus
ENSCSAVG00000005231	-	58	62.857	ENSSDUG00000020458	-	56	62.857	Seriola_dumerili
ENSCSAVG00000005231	-	85	78.000	ENSSDUG00000016140	rpl29	81	76.923	Seriola_dumerili
ENSCSAVG00000005231	-	85	78.000	ENSSLDG00000003932	rpl29	81	76.923	Seriola_lalandi_dorsalis
ENSCSAVG00000005231	-	78	80.435	ENSSPUG00000003760	RPL29	83	80.769	Sphenodon_punctatus
ENSCSAVG00000005231	-	88	73.077	ENSSPAG00000020292	rpl29	81	73.077	Stegastes_partitus
ENSCSAVG00000005231	-	66	71.795	ENSSSCG00000037047	-	88	74.419	Sus_scrofa
ENSCSAVG00000005231	-	81	62.500	ENSSSCG00000031314	-	75	62.500	Sus_scrofa
ENSCSAVG00000005231	-	78	78.261	ENSTGUG00000006027	RPL29	83	78.846	Taeniopygia_guttata
ENSCSAVG00000005231	-	88	73.077	ENSTRUG00000022273	rpl29	80	73.077	Takifugu_rubripes
ENSCSAVG00000005231	-	88	76.923	ENSTNIG00000014816	rpl29	76	76.923	Tetraodon_nigroviridis
ENSCSAVG00000005231	-	90	66.038	ENSTBEG00000000807	-	64	66.038	Tupaia_belangeri
ENSCSAVG00000005231	-	81	75.000	ENSUAMG00000002601	-	84	75.000	Ursus_americanus
ENSCSAVG00000005231	-	78	71.739	ENSVVUG00000012400	-	91	73.077	Vulpes_vulpes
ENSCSAVG00000005231	-	78	78.261	ENSXETG00000010811	rpl29	69	78.846	Xenopus_tropicalis
ENSCSAVG00000005231	-	88	78.846	ENSXCOG00000013543	rpl29	81	78.846	Xiphophorus_couchianus
ENSCSAVG00000005231	-	88	78.846	ENSXMAG00000020948	rpl29	81	78.846	Xiphophorus_maculatus