EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005270 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3889 bases
Position: chrreftig_19:140187-144075
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008889	RRM_1	PF00076.22	5.7e-25	1	2
ENSCSAVP00000008889	RRM_1	PF00076.22	5.7e-25	2	2
ENSCSAVP00000008890	RRM_1	PF00076.22	6.4e-25	1	2
ENSCSAVP00000008890	RRM_1	PF00076.22	6.4e-25	2	2
ENSCSAVP00000008889	RRM_3	PF08777.11	3.4e-09	1	1
ENSCSAVP00000008890	RRM_3	PF08777.11	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009005	-	935	-	ENSCSAVP00000008891	258 (aa)	-	H2YU81
ENSCSAVT00000009004	-	1974	-	ENSCSAVP00000008890	658 (aa)	-	H2YU80
ENSCSAVT00000009003	-	2046	-	ENSCSAVP00000008889	682 (aa)	-	H2YU79

Gene Model

Click here to download ENSCSAVG00000005270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005270	-	98	36.386	FBgn0027548	nito	65	39.782	Drosophila_melanogaster