EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005282 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7749 bases
Position: chrreftig_22:812237-819985
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008911	PAZ	PF02170.22	5.2e-23	1	1
ENSCSAVP00000008907	PAZ	PF02170.22	6.3e-23	1	1
ENSCSAVP00000008908	PAZ	PF02170.22	6.3e-23	1	1
ENSCSAVP00000008909	PAZ	PF02170.22	6.4e-23	1	1
ENSCSAVP00000008910	Piwi	PF02171.17	3.7e-112	1	1
ENSCSAVP00000008907	Piwi	PF02171.17	4.2e-112	1	1
ENSCSAVP00000008908	Piwi	PF02171.17	4.2e-112	1	1
ENSCSAVP00000008909	Piwi	PF02171.17	4.2e-112	1	1
ENSCSAVP00000008911	Piwi	PF02171.17	6.2e-109	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009021	-	2861	-	ENSCSAVP00000008907	843 (aa)	-	H2YU97
ENSCSAVT00000009023	-	3093	-	ENSCSAVP00000008909	846 (aa)	-	H2YU99
ENSCSAVT00000009022	-	3055	-	ENSCSAVP00000008908	843 (aa)	-	H2YU97
ENSCSAVT00000009025	-	2490	-	ENSCSAVP00000008911	740 (aa)	-	H2YUA1
ENSCSAVT00000009024	-	2855	-	ENSCSAVP00000008910	774 (aa)	-	H2YUA0

Gene Model

Click here to download ENSCSAVG00000005282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005282	-	99	79.104	ENSG00000123908	AGO2	97	73.113	Homo_sapiens
ENSCSAVG00000005282	-	100	78.806	ENSAPOG00000017586	ago2	96	72.170	Acanthochromis_polyacanthus
ENSCSAVG00000005282	-	99	79.104	ENSAMEG00000005019	AGO2	98	72.941	Ailuropoda_melanoleuca
ENSCSAVG00000005282	-	81	79.104	ENSACIG00000001179	ago2	96	73.796	Amphilophus_citrinellus
ENSCSAVG00000005282	-	100	78.806	ENSAOCG00000015307	ago2	96	72.288	Amphiprion_ocellaris
ENSCSAVG00000005282	-	100	78.806	ENSAPEG00000018425	ago2	96	72.288	Amphiprion_percula
ENSCSAVG00000005282	-	100	78.507	ENSATEG00000000529	ago2	96	72.052	Anabas_testudineus
ENSCSAVG00000005282	-	99	78.806	ENSAPLG00000010465	AGO2	98	72.995	Anas_platyrhynchos
ENSCSAVG00000005282	-	99	78.806	ENSACAG00000000167	AGO2	96	72.909	Anolis_carolinensis
ENSCSAVG00000005282	-	99	79.104	ENSANAG00000027399	AGO2	97	73.113	Aotus_nancymaae
ENSCSAVG00000005282	-	80	79.104	ENSACLG00000024684	ago2	98	74.462	Astatotilapia_calliptera
ENSCSAVG00000005282	-	100	78.507	ENSAMXG00000014587	ago2	98	72.288	Astyanax_mexicanus
ENSCSAVG00000005282	-	99	79.104	ENSBTAG00000001579	AGO2	98	73.113	Bos_taurus
ENSCSAVG00000005282	-	100	66.744	WBGene00000106	alg-2	96	66.628	Caenorhabditis_elegans
ENSCSAVG00000005282	-	99	75.821	WBGene00000105	alg-1	80	75.821	Caenorhabditis_elegans
ENSCSAVG00000005282	-	99	79.104	ENSCJAG00000004132	AGO2	98	73.113	Callithrix_jacchus
ENSCSAVG00000005282	-	96	79.104	ENSCAFG00000001196	AGO2	100	73.786	Canis_familiaris
ENSCSAVG00000005282	-	99	79.104	ENSCAFG00020014198	AGO2	98	72.941	Canis_lupus_dingo
ENSCSAVG00000005282	-	99	79.104	ENSCHIG00000010156	AGO2	98	73.113	Capra_hircus
ENSCSAVG00000005282	-	99	79.104	ENSTSYG00000007281	AGO2	97	73.113	Carlito_syrichta
ENSCSAVG00000005282	-	100	61.792	ENSCAPG00000013707	AGO2	97	61.792	Cavia_aperea
ENSCSAVG00000005282	-	99	79.104	ENSCPOG00000010428	AGO2	98	73.113	Cavia_porcellus
ENSCSAVG00000005282	-	99	79.104	ENSCCAG00000035031	AGO2	98	73.113	Cebus_capucinus
ENSCSAVG00000005282	-	99	79.104	ENSCATG00000038820	AGO2	92	79.104	Cercocebus_atys
ENSCSAVG00000005282	-	99	79.104	ENSCLAG00000001381	AGO2	98	73.113	Chinchilla_lanigera
ENSCSAVG00000005282	-	99	79.104	ENSCSAG00000009574	AGO2	93	73.113	Chlorocebus_sabaeus
ENSCSAVG00000005282	-	87	73.684	ENSCHOG00000008938	-	77	73.684	Choloepus_hoffmanni
ENSCSAVG00000005282	-	99	78.806	ENSCPBG00000019183	AGO2	96	73.027	Chrysemys_picta_bellii
ENSCSAVG00000005282	-	99	97.923	ENSCING00000007310	-	98	96.721	Ciona_intestinalis
ENSCSAVG00000005282	-	99	79.104	ENSCANG00000030899	AGO2	90	79.104	Colobus_angolensis_palliatus
ENSCSAVG00000005282	-	99	79.104	ENSCGRG00001013557	Ago2	97	73.113	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005282	-	99	79.104	ENSCGRG00000002120	Ago2	98	73.113	Cricetulus_griseus_crigri
ENSCSAVG00000005282	-	100	78.209	ENSCSEG00000012273	ago2	89	81.818	Cynoglossus_semilaevis
ENSCSAVG00000005282	-	100	78.209	ENSCVAG00000008763	ago2	100	71.734	Cyprinodon_variegatus
ENSCSAVG00000005282	-	100	78.507	ENSDARG00000061268	ago2	96	72.052	Danio_rerio
ENSCSAVG00000005282	-	93	79.104	ENSDNOG00000033433	AGO2	100	71.910	Dasypus_novemcinctus
ENSCSAVG00000005282	-	99	79.104	ENSDORG00000011242	Ago2	98	73.113	Dipodomys_ordii
ENSCSAVG00000005282	-	99	77.976	FBgn0262739	AGO1	90	71.478	Drosophila_melanogaster
ENSCSAVG00000005282	-	100	53.629	ENSEBUG00000014681	ago2	95	61.953	Eptatretus_burgeri
ENSCSAVG00000005282	-	96	73.594	ENSEBUG00000011986	-	99	73.594	Eptatretus_burgeri
ENSCSAVG00000005282	-	82	74.462	ENSEBUG00000008202	-	99	74.462	Eptatretus_burgeri
ENSCSAVG00000005282	-	82	74.462	ENSEBUG00000006807	-	100	74.355	Eptatretus_burgeri
ENSCSAVG00000005282	-	83	75.994	ENSEBUG00000014654	ago2	100	75.994	Eptatretus_burgeri
ENSCSAVG00000005282	-	96	79.104	ENSEASG00005021922	AGO2	100	73.786	Equus_asinus_asinus
ENSCSAVG00000005282	-	99	79.104	ENSECAG00000006078	AGO2	97	73.231	Equus_caballus
ENSCSAVG00000005282	-	80	73.684	ENSEEUG00000008564	-	69	73.684	Erinaceus_europaeus
ENSCSAVG00000005282	-	100	78.507	ENSELUG00000019378	ago2	96	72.406	Esox_lucius
ENSCSAVG00000005282	-	99	79.104	ENSFCAG00000002782	AGO2	98	73.113	Felis_catus
ENSCSAVG00000005282	-	99	78.806	ENSFALG00000002838	AGO2	97	72.909	Ficedula_albicollis
ENSCSAVG00000005282	-	99	79.104	ENSFDAG00000004759	AGO2	98	73.113	Fukomys_damarensis
ENSCSAVG00000005282	-	95	81.667	ENSFHEG00000016080	ago2	89	81.667	Fundulus_heteroclitus
ENSCSAVG00000005282	-	100	78.507	ENSGMOG00000013651	ago2	98	72.170	Gadus_morhua
ENSCSAVG00000005282	-	99	78.806	ENSGALG00000040957	AGO2	97	73.027	Gallus_gallus
ENSCSAVG00000005282	-	100	78.209	ENSGAFG00000018026	ago2	90	78.209	Gambusia_affinis
ENSCSAVG00000005282	-	100	78.507	ENSGACG00000006796	ago2	98	72.288	Gasterosteus_aculeatus
ENSCSAVG00000005282	-	99	78.806	ENSGAGG00000003914	AGO2	100	74.055	Gopherus_agassizii
ENSCSAVG00000005282	-	99	79.104	ENSGGOG00000011412	AGO2	98	73.113	Gorilla_gorilla
ENSCSAVG00000005282	-	100	79.104	ENSHBUG00000018515	ago2	98	74.462	Haplochromis_burtoni
ENSCSAVG00000005282	-	99	79.104	ENSHGLG00000005548	AGO2	98	73.113	Heterocephalus_glaber_female
ENSCSAVG00000005282	-	99	69.851	ENSHGLG00100000694	-	97	65.802	Heterocephalus_glaber_male
ENSCSAVG00000005282	-	99	78.806	ENSHGLG00100015994	-	98	72.995	Heterocephalus_glaber_male
ENSCSAVG00000005282	-	100	78.507	ENSHCOG00000006200	ago2	98	72.170	Hippocampus_comes
ENSCSAVG00000005282	-	100	78.507	ENSIPUG00000001018	ago2	98	72.373	Ictalurus_punctatus
ENSCSAVG00000005282	-	99	79.104	ENSSTOG00000008113	AGO2	98	73.113	Ictidomys_tridecemlineatus
ENSCSAVG00000005282	-	99	79.104	ENSJJAG00000018712	Ago2	97	73.113	Jaculus_jaculus
ENSCSAVG00000005282	-	100	78.209	ENSKMAG00000019999	ago2	98	72.052	Kryptolebias_marmoratus
ENSCSAVG00000005282	-	100	78.507	ENSLBEG00000005112	ago2	96	72.288	Labrus_bergylta
ENSCSAVG00000005282	-	100	79.104	ENSLACG00000001277	-	91	79.104	Latimeria_chalumnae
ENSCSAVG00000005282	-	100	78.507	ENSLOCG00000007766	ago2	97	72.052	Lepisosteus_oculatus
ENSCSAVG00000005282	-	99	79.104	ENSLAFG00000012905	AGO2	98	73.113	Loxodonta_africana
ENSCSAVG00000005282	-	99	79.104	ENSMFAG00000015384	AGO2	99	73.081	Macaca_fascicularis
ENSCSAVG00000005282	-	99	79.104	ENSMMUG00000008045	AGO2	97	73.113	Macaca_mulatta
ENSCSAVG00000005282	-	99	79.104	ENSMNEG00000019904	AGO2	98	73.113	Macaca_nemestrina
ENSCSAVG00000005282	-	99	79.104	ENSMLEG00000038874	AGO2	98	73.113	Mandrillus_leucophaeus
ENSCSAVG00000005282	-	100	78.507	ENSMAMG00000008662	ago2	92	78.507	Mastacembelus_armatus
ENSCSAVG00000005282	-	100	79.104	ENSMZEG00005008998	ago2	98	74.462	Maylandia_zebra
ENSCSAVG00000005282	-	99	78.806	ENSMGAG00000012942	AGO2	98	73.113	Meleagris_gallopavo
ENSCSAVG00000005282	-	99	79.104	ENSMAUG00000007785	Ago2	90	79.104	Mesocricetus_auratus
ENSCSAVG00000005282	-	99	79.104	ENSMICG00000004427	AGO2	97	73.113	Microcebus_murinus
ENSCSAVG00000005282	-	99	79.104	ENSMOCG00000000300	Ago2	98	73.113	Microtus_ochrogaster
ENSCSAVG00000005282	-	99	75.740	ENSMMOG00000020165	ago2	100	69.431	Mola_mola
ENSCSAVG00000005282	-	99	78.806	ENSMODG00000000748	AGO2	97	73.027	Monodelphis_domestica
ENSCSAVG00000005282	-	100	78.507	ENSMALG00000020610	ago2	97	72.170	Monopterus_albus
ENSCSAVG00000005282	-	99	79.104	MGP_CAROLIEiJ_G0019861	Ago2	97	73.113	Mus_caroli
ENSCSAVG00000005282	-	99	79.104	ENSMUSG00000036698	Ago2	97	73.113	Mus_musculus
ENSCSAVG00000005282	-	99	78.806	MGP_PahariEiJ_G0019867	Ago2	97	72.877	Mus_pahari
ENSCSAVG00000005282	-	99	79.448	MGP_SPRETEiJ_G0020759	Ago2	97	73.182	Mus_spretus
ENSCSAVG00000005282	-	99	79.104	ENSMPUG00000001930	AGO2	98	73.113	Mustela_putorius_furo
ENSCSAVG00000005282	-	68	66.267	ENSMLUG00000004552	-	100	66.267	Myotis_lucifugus
ENSCSAVG00000005282	-	99	79.104	ENSNGAG00000014556	Ago2	98	73.113	Nannospalax_galili
ENSCSAVG00000005282	-	100	79.104	ENSNBRG00000006100	ago2	96	72.524	Neolamprologus_brichardi
ENSCSAVG00000005282	-	99	79.104	ENSNLEG00000001461	AGO2	88	79.104	Nomascus_leucogenys
ENSCSAVG00000005282	-	82	75.401	ENSMEUG00000001395	AGO2	78	75.401	Notamacropus_eugenii
ENSCSAVG00000005282	-	97	76.101	ENSOPRG00000008795	-	89	76.101	Ochotona_princeps
ENSCSAVG00000005282	-	99	79.104	ENSODEG00000014145	AGO2	98	73.113	Octodon_degus
ENSCSAVG00000005282	-	100	79.104	ENSONIG00000010747	ago2	96	72.524	Oreochromis_niloticus
ENSCSAVG00000005282	-	99	78.806	ENSOANG00000007125	AGO2	97	73.113	Ornithorhynchus_anatinus
ENSCSAVG00000005282	-	99	74.328	ENSOCUG00000006066	AGO2	98	71.226	Oryctolagus_cuniculus
ENSCSAVG00000005282	-	100	78.209	ENSORLG00000004615	ago2	98	71.934	Oryzias_latipes
ENSCSAVG00000005282	-	100	78.209	ENSORLG00020003449	ago2	98	71.934	Oryzias_latipes_hni
ENSCSAVG00000005282	-	100	78.209	ENSORLG00015015319	ago2	98	71.934	Oryzias_latipes_hsok
ENSCSAVG00000005282	-	100	78.209	ENSOMEG00000017751	ago2	97	74.138	Oryzias_melastigma
ENSCSAVG00000005282	-	99	79.104	ENSOGAG00000007933	AGO2	98	73.113	Otolemur_garnettii
ENSCSAVG00000005282	-	99	75.298	ENSOARG00000003763	AGO2	98	71.614	Ovis_aries
ENSCSAVG00000005282	-	99	79.104	ENSPPAG00000037787	AGO2	98	73.113	Pan_paniscus
ENSCSAVG00000005282	-	99	79.104	ENSPPRG00000002594	AGO2	98	73.113	Panthera_pardus
ENSCSAVG00000005282	-	99	76.418	ENSPTIG00000007438	AGO2	97	72.052	Panthera_tigris_altaica
ENSCSAVG00000005282	-	99	79.104	ENSPTRG00000020622	AGO2	97	73.113	Pan_troglodytes
ENSCSAVG00000005282	-	99	79.104	ENSPANG00000005604	AGO2	90	79.104	Papio_anubis
ENSCSAVG00000005282	-	100	78.507	ENSPKIG00000001824	ago2	100	73.782	Paramormyrops_kingsleyae
ENSCSAVG00000005282	-	100	71.731	ENSPSIG00000004064	AGO2	97	71.731	Pelodiscus_sinensis
ENSCSAVG00000005282	-	99	79.104	ENSPEMG00000008137	Ago2	98	73.113	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005282	-	99	78.806	ENSPCIG00000026513	AGO2	97	73.027	Phascolarctos_cinereus
ENSCSAVG00000005282	-	100	78.209	ENSPFOG00000005321	ago2	96	72.406	Poecilia_formosa
ENSCSAVG00000005282	-	100	78.209	ENSPLAG00000007911	ago2	96	72.406	Poecilia_latipinna
ENSCSAVG00000005282	-	100	78.209	ENSPMEG00000007977	ago2	96	72.406	Poecilia_mexicana
ENSCSAVG00000005282	-	100	78.209	ENSPREG00000002072	ago2	97	73.034	Poecilia_reticulata
ENSCSAVG00000005282	-	54	80.056	ENSPPYG00000018908	-	97	74.458	Pongo_abelii
ENSCSAVG00000005282	-	100	69.104	ENSPCAG00000002880	AGO2	98	69.104	Procavia_capensis
ENSCSAVG00000005282	-	99	79.104	ENSPCOG00000023047	AGO2	98	73.113	Propithecus_coquereli
ENSCSAVG00000005282	-	100	60.024	ENSPVAG00000013238	AGO2	97	60.024	Pteropus_vampyrus
ENSCSAVG00000005282	-	100	79.104	ENSPNYG00000019928	ago2	98	74.462	Pundamilia_nyererei
ENSCSAVG00000005282	-	100	78.806	ENSPNAG00000029030	ago2	96	72.406	Pygocentrus_nattereri
ENSCSAVG00000005282	-	99	79.104	ENSRNOG00000008533	Ago2	95	73.113	Rattus_norvegicus
ENSCSAVG00000005282	-	99	79.104	ENSRBIG00000028225	AGO2	98	73.113	Rhinopithecus_bieti
ENSCSAVG00000005282	-	99	79.104	ENSRROG00000003162	AGO2	99	73.081	Rhinopithecus_roxellana
ENSCSAVG00000005282	-	99	79.104	ENSSBOG00000018934	AGO2	98	73.113	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005282	-	99	78.806	ENSSHAG00000009593	AGO2	97	73.027	Sarcophilus_harrisii
ENSCSAVG00000005282	-	100	78.806	ENSSFOG00015012817	ago2	97	72.170	Scleropages_formosus
ENSCSAVG00000005282	-	100	78.507	ENSSMAG00000014089	ago2	97	72.288	Scophthalmus_maximus
ENSCSAVG00000005282	-	100	78.507	ENSSDUG00000005726	ago2	96	72.170	Seriola_dumerili
ENSCSAVG00000005282	-	100	78.507	ENSSLDG00000025582	ago2	99	72.170	Seriola_lalandi_dorsalis
ENSCSAVG00000005282	-	89	61.702	ENSSARG00000007232	-	100	61.702	Sorex_araneus
ENSCSAVG00000005282	-	99	78.806	ENSSPUG00000006608	AGO2	97	72.877	Sphenodon_punctatus
ENSCSAVG00000005282	-	100	78.806	ENSSPAG00000019543	ago2	96	72.288	Stegastes_partitus
ENSCSAVG00000005282	-	99	79.104	ENSSSCG00000005935	AGO2	98	73.113	Sus_scrofa
ENSCSAVG00000005282	-	99	78.806	ENSTGUG00000012652	-	98	72.877	Taeniopygia_guttata
ENSCSAVG00000005282	-	99	71.045	ENSTRUG00000007370	ago2	98	73.518	Takifugu_rubripes
ENSCSAVG00000005282	-	100	78.507	ENSTNIG00000017760	ago2	97	72.288	Tetraodon_nigroviridis
ENSCSAVG00000005282	-	68	80.114	ENSTBEG00000003401	-	84	74.510	Tupaia_belangeri
ENSCSAVG00000005282	-	99	79.104	ENSTTRG00000002872	AGO2	98	73.113	Tursiops_truncatus
ENSCSAVG00000005282	-	99	79.104	ENSUAMG00000010074	AGO2	100	74.023	Ursus_americanus
ENSCSAVG00000005282	-	100	68.396	ENSUMAG00000019572	AGO2	98	68.235	Ursus_maritimus
ENSCSAVG00000005282	-	96	79.104	ENSVVUG00000014692	AGO2	100	73.786	Vulpes_vulpes
ENSCSAVG00000005282	-	99	78.507	ENSXETG00000023755	ago2	97	72.398	Xenopus_tropicalis
ENSCSAVG00000005282	-	100	78.209	ENSXCOG00000000634	ago2	96	72.170	Xiphophorus_couchianus
ENSCSAVG00000005282	-	100	78.209	ENSXMAG00000000787	ago2	90	78.209	Xiphophorus_maculatus