EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005293 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 5963 bases
Position: chrreftig_76:512035-517997
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008951	ASCH	PF04266.14	1.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009065	-	1807	-	ENSCSAVP00000008951	564 (aa)	-	H2YUE1

Gene Model

Click here to download ENSCSAVG00000005293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005293	-	99	41.709	ENSG00000103671	TRIP4	98	41.709	Homo_sapiens
ENSCSAVG00000005293	-	54	46.875	ENSAPOG00000023326	trip4	59	46.875	Acanthochromis_polyacanthus
ENSCSAVG00000005293	-	99	42.786	ENSAMEG00000002591	TRIP4	98	42.809	Ailuropoda_melanoleuca
ENSCSAVG00000005293	-	95	38.407	ENSACIG00000010577	trip4	97	38.407	Amphilophus_citrinellus
ENSCSAVG00000005293	-	97	43.106	ENSAOCG00000000395	trip4	90	44.751	Amphiprion_ocellaris
ENSCSAVG00000005293	-	98	44.370	ENSAPEG00000003621	trip4	98	44.538	Amphiprion_percula
ENSCSAVG00000005293	-	98	43.508	ENSATEG00000019577	trip4	98	43.508	Anabas_testudineus
ENSCSAVG00000005293	-	99	42.404	ENSAPLG00000004612	TRIP4	99	42.905	Anas_platyrhynchos
ENSCSAVG00000005293	-	99	42.546	ENSACAG00000007077	TRIP4	89	42.546	Anolis_carolinensis
ENSCSAVG00000005293	-	99	41.235	ENSANAG00000027612	TRIP4	98	41.235	Aotus_nancymaae
ENSCSAVG00000005293	-	98	44.370	ENSACLG00000013819	trip4	98	44.370	Astatotilapia_calliptera
ENSCSAVG00000005293	-	98	41.596	ENSAMXG00000007270	trip4	99	42.203	Astyanax_mexicanus
ENSCSAVG00000005293	-	99	41.903	ENSBTAG00000014493	TRIP4	99	41.903	Bos_taurus
ENSCSAVG00000005293	-	99	41.374	ENSCJAG00000005107	TRIP4	98	41.374	Callithrix_jacchus
ENSCSAVG00000005293	-	99	42.479	ENSCAFG00000017091	TRIP4	99	42.479	Canis_familiaris
ENSCSAVG00000005293	-	99	42.479	ENSCAFG00020008960	TRIP4	99	42.479	Canis_lupus_dingo
ENSCSAVG00000005293	-	97	41.286	ENSCHIG00000023818	TRIP4	98	41.286	Capra_hircus
ENSCSAVG00000005293	-	99	41.402	ENSTSYG00000007185	TRIP4	98	41.402	Carlito_syrichta
ENSCSAVG00000005293	-	57	36.842	ENSCAPG00000017624	TRIP4	69	36.735	Cavia_aperea
ENSCSAVG00000005293	-	99	41.876	ENSCPOG00000006483	TRIP4	99	41.876	Cavia_porcellus
ENSCSAVG00000005293	-	99	42.215	ENSCCAG00000026483	TRIP4	98	42.435	Cebus_capucinus
ENSCSAVG00000005293	-	99	41.709	ENSCATG00000041144	TRIP4	98	41.709	Cercocebus_atys
ENSCSAVG00000005293	-	99	41.764	ENSCLAG00000006872	TRIP4	99	41.764	Chinchilla_lanigera
ENSCSAVG00000005293	-	99	41.709	ENSCSAG00000012499	TRIP4	98	41.709	Chlorocebus_sabaeus
ENSCSAVG00000005293	-	76	41.986	ENSCHOG00000010776	TRIP4	74	41.986	Choloepus_hoffmanni
ENSCSAVG00000005293	-	97	43.345	ENSCPBG00000006093	TRIP4	96	44.523	Chrysemys_picta_bellii
ENSCSAVG00000005293	-	99	39.262	ENSCANG00000033593	TRIP4	98	39.262	Colobus_angolensis_palliatus
ENSCSAVG00000005293	-	99	42.000	ENSCGRG00001021158	Trip4	99	42.000	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005293	-	99	33.499	ENSCGRG00000002340	Trip4	99	31.271	Cricetulus_griseus_crigri
ENSCSAVG00000005293	-	99	43.167	ENSCSEG00000009015	trip4	99	43.167	Cynoglossus_semilaevis
ENSCSAVG00000005293	-	89	43.623	ENSCVAG00000020984	trip4	97	43.623	Cyprinodon_variegatus
ENSCSAVG00000005293	-	96	42.857	ENSCVAG00000021094	-	95	42.857	Cyprinodon_variegatus
ENSCSAVG00000005293	-	98	42.857	ENSDARG00000098074	trip4	99	42.760	Danio_rerio
ENSCSAVG00000005293	-	99	42.500	ENSDNOG00000008654	TRIP4	98	42.500	Dasypus_novemcinctus
ENSCSAVG00000005293	-	99	41.597	ENSDORG00000014914	Trip4	99	41.597	Dipodomys_ordii
ENSCSAVG00000005293	-	83	40.795	FBgn0031115	CG11710	86	40.795	Drosophila_melanogaster
ENSCSAVG00000005293	-	98	41.794	ENSETEG00000001597	TRIP4	96	41.794	Echinops_telfairi
ENSCSAVG00000005293	-	98	42.150	ENSEBUG00000009039	trip4	98	42.150	Eptatretus_burgeri
ENSCSAVG00000005293	-	99	42.289	ENSEASG00005006538	TRIP4	99	42.289	Equus_asinus_asinus
ENSCSAVG00000005293	-	91	40.975	ENSECAG00000024689	TRIP4	97	40.975	Equus_caballus
ENSCSAVG00000005293	-	75	51.250	ENSEEUG00000007741	TRIP4	74	51.250	Erinaceus_europaeus
ENSCSAVG00000005293	-	98	44.237	ENSELUG00000022449	trip4	98	44.237	Esox_lucius
ENSCSAVG00000005293	-	99	42.053	ENSFCAG00000010618	TRIP4	99	42.053	Felis_catus
ENSCSAVG00000005293	-	98	42.664	ENSFALG00000009816	TRIP4	98	43.508	Ficedula_albicollis
ENSCSAVG00000005293	-	99	41.709	ENSFDAG00000017051	TRIP4	98	41.709	Fukomys_damarensis
ENSCSAVG00000005293	-	98	43.581	ENSFHEG00000015795	trip4	98	43.581	Fundulus_heteroclitus
ENSCSAVG00000005293	-	98	43.345	ENSGMOG00000008455	trip4	98	43.345	Gadus_morhua
ENSCSAVG00000005293	-	99	42.475	ENSGALG00000030672	TRIP4	99	42.809	Gallus_gallus
ENSCSAVG00000005293	-	98	42.833	ENSGAFG00000003491	trip4	98	42.833	Gambusia_affinis
ENSCSAVG00000005293	-	98	43.718	ENSGACG00000016986	trip4	97	43.718	Gasterosteus_aculeatus
ENSCSAVG00000005293	-	79	47.391	ENSGAGG00000003671	TRIP4	79	47.391	Gopherus_agassizii
ENSCSAVG00000005293	-	99	41.709	ENSGGOG00000022608	TRIP4	98	41.709	Gorilla_gorilla
ENSCSAVG00000005293	-	98	44.202	ENSHBUG00000021071	trip4	98	44.202	Haplochromis_burtoni
ENSCSAVG00000005293	-	98	41.582	ENSHGLG00000009286	TRIP4	97	41.582	Heterocephalus_glaber_female
ENSCSAVG00000005293	-	98	41.513	ENSHGLG00100017760	TRIP4	97	41.513	Heterocephalus_glaber_male
ENSCSAVG00000005293	-	98	42.736	ENSHCOG00000017904	trip4	98	42.905	Hippocampus_comes
ENSCSAVG00000005293	-	98	42.096	ENSIPUG00000013205	trip4	99	42.096	Ictalurus_punctatus
ENSCSAVG00000005293	-	99	41.472	ENSSTOG00000014228	TRIP4	98	41.611	Ictidomys_tridecemlineatus
ENSCSAVG00000005293	-	97	37.713	ENSJJAG00000001629	Trip4	99	37.713	Jaculus_jaculus
ENSCSAVG00000005293	-	98	43.898	ENSKMAG00000001297	trip4	98	43.898	Kryptolebias_marmoratus
ENSCSAVG00000005293	-	97	44.852	ENSLBEG00000018354	trip4	98	43.939	Labrus_bergylta
ENSCSAVG00000005293	-	98	45.101	ENSLACG00000014856	TRIP4	98	45.101	Latimeria_chalumnae
ENSCSAVG00000005293	-	98	42.809	ENSLOCG00000014993	trip4	98	42.809	Lepisosteus_oculatus
ENSCSAVG00000005293	-	99	40.765	ENSLAFG00000017612	TRIP4	99	40.765	Loxodonta_africana
ENSCSAVG00000005293	-	99	41.709	ENSMFAG00000036568	TRIP4	98	41.709	Macaca_fascicularis
ENSCSAVG00000005293	-	99	41.709	ENSMMUG00000009882	TRIP4	98	41.709	Macaca_mulatta
ENSCSAVG00000005293	-	99	41.709	ENSMNEG00000033592	TRIP4	98	41.709	Macaca_nemestrina
ENSCSAVG00000005293	-	99	41.709	ENSMLEG00000027911	TRIP4	98	41.709	Mandrillus_leucophaeus
ENSCSAVG00000005293	-	98	43.339	ENSMAMG00000013374	trip4	98	43.339	Mastacembelus_armatus
ENSCSAVG00000005293	-	98	44.370	ENSMZEG00005013450	trip4	98	44.370	Maylandia_zebra
ENSCSAVG00000005293	-	99	41.206	ENSMICG00000008679	TRIP4	98	41.206	Microcebus_murinus
ENSCSAVG00000005293	-	99	42.237	ENSMOCG00000012669	Trip4	99	42.237	Microtus_ochrogaster
ENSCSAVG00000005293	-	96	42.734	ENSMMOG00000002315	trip4	97	42.734	Mola_mola
ENSCSAVG00000005293	-	99	42.809	ENSMODG00000010743	TRIP4	90	42.809	Monodelphis_domestica
ENSCSAVG00000005293	-	99	41.556	MGP_CAROLIEiJ_G0032370	Trip4	99	41.556	Mus_caroli
ENSCSAVG00000005293	-	99	40.894	ENSMUSG00000032386	Trip4	99	40.894	Mus_musculus
ENSCSAVG00000005293	-	99	42.053	MGP_PahariEiJ_G0015235	Trip4	99	42.053	Mus_pahari
ENSCSAVG00000005293	-	99	41.722	MGP_SPRETEiJ_G0033509	Trip4	99	41.722	Mus_spretus
ENSCSAVG00000005293	-	99	42.715	ENSMPUG00000000568	TRIP4	99	42.715	Mustela_putorius_furo
ENSCSAVG00000005293	-	94	43.717	ENSMLUG00000013367	TRIP4	98	43.717	Myotis_lucifugus
ENSCSAVG00000005293	-	98	41.990	ENSNGAG00000019566	Trip4	97	41.990	Nannospalax_galili
ENSCSAVG00000005293	-	96	44.732	ENSNBRG00000020663	trip4	96	44.732	Neolamprologus_brichardi
ENSCSAVG00000005293	-	99	41.903	ENSNLEG00000012455	TRIP4	98	41.903	Nomascus_leucogenys
ENSCSAVG00000005293	-	65	42.894	ENSMEUG00000005886	TRIP4	75	42.894	Notamacropus_eugenii
ENSCSAVG00000005293	-	99	39.765	ENSOPRG00000009512	TRIP4	98	39.765	Ochotona_princeps
ENSCSAVG00000005293	-	98	42.159	ENSODEG00000016494	TRIP4	97	42.159	Octodon_degus
ENSCSAVG00000005293	-	89	43.934	ENSONIG00000005703	trip4	98	43.934	Oreochromis_niloticus
ENSCSAVG00000005293	-	98	42.424	ENSOANG00000013357	TRIP4	95	42.088	Ornithorhynchus_anatinus
ENSCSAVG00000005293	-	99	42.571	ENSOCUG00000002322	TRIP4	98	42.571	Oryctolagus_cuniculus
ENSCSAVG00000005293	-	98	41.695	ENSORLG00000001710	trip4	98	41.864	Oryzias_latipes
ENSCSAVG00000005293	-	98	41.426	ENSORLG00020022346	trip4	98	41.596	Oryzias_latipes_hni
ENSCSAVG00000005293	-	98	41.426	ENSORLG00015022509	trip4	98	41.596	Oryzias_latipes_hsok
ENSCSAVG00000005293	-	98	42.640	ENSOMEG00000007655	trip4	98	42.809	Oryzias_melastigma
ENSCSAVG00000005293	-	99	38.935	ENSOGAG00000012427	TRIP4	98	38.935	Otolemur_garnettii
ENSCSAVG00000005293	-	99	42.237	ENSOARG00000020739	TRIP4	99	42.237	Ovis_aries
ENSCSAVG00000005293	-	99	41.709	ENSPPAG00000017953	TRIP4	98	41.709	Pan_paniscus
ENSCSAVG00000005293	-	99	42.193	ENSPPRG00000013668	TRIP4	99	42.193	Panthera_pardus
ENSCSAVG00000005293	-	99	41.887	ENSPTIG00000014502	TRIP4	99	41.887	Panthera_tigris_altaica
ENSCSAVG00000005293	-	80	45.940	ENSPTRG00000007160	TRIP4	82	45.940	Pan_troglodytes
ENSCSAVG00000005293	-	99	41.709	ENSPANG00000016750	TRIP4	98	41.709	Papio_anubis
ENSCSAVG00000005293	-	89	42.272	ENSPKIG00000009253	trip4	98	42.272	Paramormyrops_kingsleyae
ENSCSAVG00000005293	-	98	42.419	ENSPKIG00000022978	-	99	42.419	Paramormyrops_kingsleyae
ENSCSAVG00000005293	-	94	44.014	ENSPSIG00000012082	TRIP4	97	44.014	Pelodiscus_sinensis
ENSCSAVG00000005293	-	98	43.860	ENSPMGG00000019015	trip4	96	44.035	Periophthalmus_magnuspinnatus
ENSCSAVG00000005293	-	99	42.327	ENSPEMG00000012446	Trip4	99	42.327	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005293	-	99	41.396	ENSPCIG00000029450	TRIP4	97	41.396	Phascolarctos_cinereus
ENSCSAVG00000005293	-	98	43.655	ENSPFOG00000014732	trip4	98	43.655	Poecilia_formosa
ENSCSAVG00000005293	-	98	42.664	ENSPLAG00000013794	trip4	98	42.664	Poecilia_latipinna
ENSCSAVG00000005293	-	98	43.655	ENSPMEG00000001331	trip4	98	43.655	Poecilia_mexicana
ENSCSAVG00000005293	-	98	42.978	ENSPREG00000006576	trip4	98	42.978	Poecilia_reticulata
ENSCSAVG00000005293	-	99	41.611	ENSPPYG00000006550	TRIP4	98	41.611	Pongo_abelii
ENSCSAVG00000005293	-	98	37.415	ENSPCAG00000016310	TRIP4	98	37.374	Procavia_capensis
ENSCSAVG00000005293	-	99	34.242	ENSPCOG00000013484	TRIP4	98	35.140	Propithecus_coquereli
ENSCSAVG00000005293	-	86	42.473	ENSPVAG00000016613	TRIP4	88	42.473	Pteropus_vampyrus
ENSCSAVG00000005293	-	96	44.245	ENSPNYG00000011318	trip4	95	44.964	Pundamilia_nyererei
ENSCSAVG00000005293	-	98	42.857	ENSPNAG00000020884	trip4	99	43.633	Pygocentrus_nattereri
ENSCSAVG00000005293	-	99	41.764	ENSRNOG00000016121	Trip4	98	41.764	Rattus_norvegicus
ENSCSAVG00000005293	-	65	44.094	ENSRBIG00000038027	TRIP4	72	44.094	Rhinopithecus_bieti
ENSCSAVG00000005293	-	99	41.709	ENSRROG00000030525	TRIP4	98	41.709	Rhinopithecus_roxellana
ENSCSAVG00000005293	-	80	42.612	ENSSBOG00000020516	TRIP4	81	42.979	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005293	-	94	43.509	ENSSHAG00000000040	TRIP4	99	43.386	Sarcophilus_harrisii
ENSCSAVG00000005293	-	98	43.915	ENSSFOG00015000143	trip4	98	44.092	Scleropages_formosus
ENSCSAVG00000005293	-	98	42.496	ENSSMAG00000010539	trip4	99	42.496	Scophthalmus_maximus
ENSCSAVG00000005293	-	98	43.771	ENSSDUG00000000225	trip4	99	43.718	Seriola_dumerili
ENSCSAVG00000005293	-	98	43.002	ENSSLDG00000000215	trip4	98	43.002	Seriola_lalandi_dorsalis
ENSCSAVG00000005293	-	70	44.880	ENSSARG00000003710	TRIP4	55	44.880	Sorex_araneus
ENSCSAVG00000005293	-	97	40.381	ENSSPUG00000004511	TRIP4	98	41.075	Sphenodon_punctatus
ENSCSAVG00000005293	-	98	43.508	ENSSPAG00000008520	trip4	98	43.508	Stegastes_partitus
ENSCSAVG00000005293	-	99	42.289	ENSSSCG00000004552	TRIP4	89	42.289	Sus_scrofa
ENSCSAVG00000005293	-	98	42.542	ENSTGUG00000004673	TRIP4	99	43.220	Taeniopygia_guttata
ENSCSAVG00000005293	-	98	43.051	ENSTRUG00000016488	trip4	98	43.581	Takifugu_rubripes
ENSCSAVG00000005293	-	96	43.576	ENSTNIG00000009582	trip4	95	43.576	Tetraodon_nigroviridis
ENSCSAVG00000005293	-	94	41.815	ENSTBEG00000015881	TRIP4	99	42.705	Tupaia_belangeri
ENSCSAVG00000005293	-	89	49.206	ENSTTRG00000009674	TRIP4	87	49.206	Tursiops_truncatus
ENSCSAVG00000005293	-	99	42.691	ENSUMAG00000012640	TRIP4	99	42.691	Ursus_maritimus
ENSCSAVG00000005293	-	99	38.526	ENSVPAG00000010808	TRIP4	98	38.526	Vicugna_pacos
ENSCSAVG00000005293	-	99	42.620	ENSVVUG00000013776	TRIP4	99	42.620	Vulpes_vulpes
ENSCSAVG00000005293	-	98	42.517	ENSXETG00000010649	trip4	96	42.517	Xenopus_tropicalis
ENSCSAVG00000005293	-	98	43.170	ENSXMAG00000000526	trip4	98	43.339	Xiphophorus_maculatus