EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005300 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2790 bases
Position: chrreftig_35:1121631-1124420
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000008959	MIF4G_like	PF09088.11	9.7e-30	1	1
ENSCSAVP00000008959	MIF4G_like_2	PF09090.11	5.4e-78	1	1
ENSCSAVP00000008958	MIF4G_like_2	PF09090.11	2e-46	1	1
ENSCSAVP00000008959	MIF4G	PF02854.19	2.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009072	-	869	-	ENSCSAVP00000008958	193 (aa)	-	H2YUE8
ENSCSAVT00000009073	-	2406	-	ENSCSAVP00000008959	801 (aa)	-	H2YUE9

Gene Model

Click here to download ENSCSAVG00000005300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005300	-	99	53.927	ENSG00000136937	NCBP1	99	53.576	Homo_sapiens
ENSCSAVG00000005300	-	99	54.124	ENSAPOG00000008002	NCBP1	99	53.750	Acanthochromis_polyacanthus
ENSCSAVG00000005300	-	99	53.927	ENSAMEG00000004763	NCBP1	99	52.927	Ailuropoda_melanoleuca
ENSCSAVG00000005300	-	99	54.922	ENSACIG00000000274	NCBP1	99	53.692	Amphilophus_citrinellus
ENSCSAVG00000005300	-	99	54.124	ENSAOCG00000021148	NCBP1	99	54.000	Amphiprion_ocellaris
ENSCSAVG00000005300	-	99	54.124	ENSAPEG00000001701	NCBP1	99	54.000	Amphiprion_percula
ENSCSAVG00000005300	-	99	54.124	ENSATEG00000006929	NCBP1	99	53.375	Anabas_testudineus
ENSCSAVG00000005300	-	99	53.927	ENSAPLG00000016318	NCBP1	98	51.783	Anas_platyrhynchos
ENSCSAVG00000005300	-	97	52.883	ENSACAG00000004409	NCBP1	86	53.598	Anolis_carolinensis
ENSCSAVG00000005300	-	99	53.927	ENSANAG00000025744	NCBP1	98	52.901	Aotus_nancymaae
ENSCSAVG00000005300	-	99	54.124	ENSACLG00000014812	NCBP1	99	53.625	Astatotilapia_calliptera
ENSCSAVG00000005300	-	99	54.082	ENSAMXG00000016364	NCBP1	99	53.741	Astyanax_mexicanus
ENSCSAVG00000005300	-	99	53.927	ENSBTAG00000009732	NCBP1	97	55.864	Bos_taurus
ENSCSAVG00000005300	-	97	31.481	WBGene00018156	ncbp-1	99	31.481	Caenorhabditis_elegans
ENSCSAVG00000005300	-	99	53.927	ENSCJAG00000010840	NCBP1	99	56.306	Callithrix_jacchus
ENSCSAVG00000005300	-	99	53.927	ENSCAFG00000002445	NCBP1	99	53.199	Canis_familiaris
ENSCSAVG00000005300	-	99	53.927	ENSCAFG00020017997	NCBP1	99	53.208	Canis_lupus_dingo
ENSCSAVG00000005300	-	99	54.450	ENSCHIG00000020139	NCBP1	99	53.325	Capra_hircus
ENSCSAVG00000005300	-	50	52.871	ENSTSYG00000011914	NCBP1	98	56.740	Carlito_syrichta
ENSCSAVG00000005300	-	79	48.206	ENSCAPG00000014252	NCBP1	90	48.206	Cavia_aperea
ENSCSAVG00000005300	-	99	53.927	ENSCPOG00000012573	NCBP1	96	52.863	Cavia_porcellus
ENSCSAVG00000005300	-	99	53.927	ENSCCAG00000032297	NCBP1	99	53.450	Cebus_capucinus
ENSCSAVG00000005300	-	99	53.927	ENSCATG00000010052	NCBP1	99	53.576	Cercocebus_atys
ENSCSAVG00000005300	-	99	53.927	ENSCLAG00000014339	NCBP1	99	53.450	Chinchilla_lanigera
ENSCSAVG00000005300	-	99	53.927	ENSCSAG00000010929	NCBP1	99	53.576	Chlorocebus_sabaeus
ENSCSAVG00000005300	-	86	52.000	ENSCHOG00000010332	NCBP1	88	52.000	Choloepus_hoffmanni
ENSCSAVG00000005300	-	99	54.124	ENSCPBG00000024344	NCBP1	99	53.074	Chrysemys_picta_bellii
ENSCSAVG00000005300	-	100	86.528	ENSCING00000008990	-	100	83.250	Ciona_intestinalis
ENSCSAVG00000005300	-	99	53.927	ENSCANG00000036913	NCBP1	99	53.576	Colobus_angolensis_palliatus
ENSCSAVG00000005300	-	99	53.927	ENSCGRG00001015771	Ncbp1	99	52.304	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005300	-	99	53.927	ENSCGRG00000010311	Ncbp1	99	52.911	Cricetulus_griseus_crigri
ENSCSAVG00000005300	-	99	54.124	ENSCSEG00000012377	NCBP1	99	53.000	Cynoglossus_semilaevis
ENSCSAVG00000005300	-	99	53.333	ENSCVAG00000008795	NCBP1	99	53.808	Cyprinodon_variegatus
ENSCSAVG00000005300	-	99	53.403	ENSDNOG00000006885	NCBP1	99	53.325	Dasypus_novemcinctus
ENSCSAVG00000005300	-	99	53.927	ENSDORG00000013652	Ncbp1	99	50.314	Dipodomys_ordii
ENSCSAVG00000005300	-	99	51.531	FBgn0022942	Cbp80	99	48.276	Drosophila_melanogaster
ENSCSAVG00000005300	-	81	30.396	FBgn0038887	CG7907	86	30.396	Drosophila_melanogaster
ENSCSAVG00000005300	-	99	54.450	ENSETEG00000009705	NCBP1	87	51.092	Echinops_telfairi
ENSCSAVG00000005300	-	99	53.646	ENSEBUG00000008386	NCBP1	99	52.310	Eptatretus_burgeri
ENSCSAVG00000005300	-	99	53.403	ENSEASG00005022795	NCBP1	99	53.074	Equus_asinus_asinus
ENSCSAVG00000005300	-	99	53.403	ENSECAG00000013847	NCBP1	99	53.074	Equus_caballus
ENSCSAVG00000005300	-	93	50.591	ENSEEUG00000015973	NCBP1	99	50.656	Erinaceus_europaeus
ENSCSAVG00000005300	-	99	55.385	ENSELUG00000022519	NCBP1	99	53.808	Esox_lucius
ENSCSAVG00000005300	-	99	53.927	ENSFCAG00000001206	NCBP1	99	53.074	Felis_catus
ENSCSAVG00000005300	-	99	52.577	ENSFALG00000001193	NCBP1	99	53.199	Ficedula_albicollis
ENSCSAVG00000005300	-	99	53.403	ENSFDAG00000010864	NCBP1	99	53.350	Fukomys_damarensis
ENSCSAVG00000005300	-	99	52.308	ENSFHEG00000000655	NCBP1	99	53.308	Fundulus_heteroclitus
ENSCSAVG00000005300	-	99	52.821	ENSGMOG00000008653	NCBP1	98	53.558	Gadus_morhua
ENSCSAVG00000005300	-	99	53.403	ENSGALG00000002087	NCBP1	99	52.677	Gallus_gallus
ENSCSAVG00000005300	-	99	52.308	ENSGAFG00000017787	NCBP1	99	53.558	Gambusia_affinis
ENSCSAVG00000005300	-	99	54.082	ENSGACG00000016772	NCBP1	99	52.984	Gasterosteus_aculeatus
ENSCSAVG00000005300	-	99	54.124	ENSGAGG00000019483	NCBP1	98	54.156	Gopherus_agassizii
ENSCSAVG00000005300	-	99	53.927	ENSGGOG00000001376	NCBP1	99	53.576	Gorilla_gorilla
ENSCSAVG00000005300	-	99	54.124	ENSHBUG00000020843	NCBP1	99	53.625	Haplochromis_burtoni
ENSCSAVG00000005300	-	97	48.404	ENSHGLG00000018112	-	99	47.793	Heterocephalus_glaber_female
ENSCSAVG00000005300	-	99	53.927	ENSHGLG00000001882	NCBP1	99	53.450	Heterocephalus_glaber_female
ENSCSAVG00000005300	-	97	48.404	ENSHGLG00100017373	-	99	47.793	Heterocephalus_glaber_male
ENSCSAVG00000005300	-	99	53.927	ENSHGLG00100013014	NCBP1	99	53.450	Heterocephalus_glaber_male
ENSCSAVG00000005300	-	99	54.872	ENSHCOG00000000204	NCBP1	87	50.746	Hippocampus_comes
ENSCSAVG00000005300	-	99	55.897	ENSIPUG00000007275	ncbp1	99	54.057	Ictalurus_punctatus
ENSCSAVG00000005300	-	99	53.927	ENSSTOG00000002695	NCBP1	99	53.199	Ictidomys_tridecemlineatus
ENSCSAVG00000005300	-	99	53.093	ENSKMAG00000003594	NCBP1	97	57.377	Kryptolebias_marmoratus
ENSCSAVG00000005300	-	99	53.608	ENSLBEG00000011661	NCBP1	99	52.528	Labrus_bergylta
ENSCSAVG00000005300	-	98	48.831	ENSLACG00000013955	NCBP1	99	48.831	Latimeria_chalumnae
ENSCSAVG00000005300	-	99	58.031	ENSLOCG00000009579	NCBP1	99	48.897	Lepisosteus_oculatus
ENSCSAVG00000005300	-	99	53.927	ENSLAFG00000005999	NCBP1	99	53.199	Loxodonta_africana
ENSCSAVG00000005300	-	99	53.927	ENSMFAG00000030994	NCBP1	99	53.576	Macaca_fascicularis
ENSCSAVG00000005300	-	99	53.927	ENSMMUG00000012281	NCBP1	99	53.778	Macaca_mulatta
ENSCSAVG00000005300	-	99	53.927	ENSMNEG00000042790	NCBP1	99	53.576	Macaca_nemestrina
ENSCSAVG00000005300	-	99	53.927	ENSMLEG00000030374	NCBP1	99	53.576	Mandrillus_leucophaeus
ENSCSAVG00000005300	-	99	53.093	ENSMAMG00000014806	NCBP1	99	52.638	Mastacembelus_armatus
ENSCSAVG00000005300	-	99	54.124	ENSMZEG00005003469	NCBP1	99	53.625	Maylandia_zebra
ENSCSAVG00000005300	-	99	53.807	ENSMZEG00005009290	-	99	53.768	Maylandia_zebra
ENSCSAVG00000005300	-	61	52.542	ENSMGAG00000008720	NCBP1	100	46.014	Meleagris_gallopavo
ENSCSAVG00000005300	-	99	53.927	ENSMAUG00000020583	Ncbp1	98	52.785	Mesocricetus_auratus
ENSCSAVG00000005300	-	99	53.403	ENSMICG00000012682	NCBP1	99	52.949	Microcebus_murinus
ENSCSAVG00000005300	-	99	52.880	ENSMOCG00000015818	Ncbp1	99	52.179	Microtus_ochrogaster
ENSCSAVG00000005300	-	99	53.299	ENSMMOG00000002610	NCBP1	99	51.918	Mola_mola
ENSCSAVG00000005300	-	99	53.403	ENSMODG00000003202	NCBP1	98	52.956	Monodelphis_domestica
ENSCSAVG00000005300	-	99	54.822	ENSMALG00000003547	NCBP1	99	53.125	Monopterus_albus
ENSCSAVG00000005300	-	99	54.450	MGP_CAROLIEiJ_G0025982	Ncbp1	99	52.304	Mus_caroli
ENSCSAVG00000005300	-	99	54.450	ENSMUSG00000028330	Ncbp1	99	52.304	Mus_musculus
ENSCSAVG00000005300	-	99	53.927	MGP_PahariEiJ_G0028318	Ncbp1	99	52.179	Mus_pahari
ENSCSAVG00000005300	-	99	54.450	MGP_SPRETEiJ_G0026945	Ncbp1	99	52.304	Mus_spretus
ENSCSAVG00000005300	-	99	53.927	ENSMPUG00000006399	NCBP1	99	53.325	Mustela_putorius_furo
ENSCSAVG00000005300	-	99	53.403	ENSMLUG00000015201	NCBP1	99	53.350	Myotis_lucifugus
ENSCSAVG00000005300	-	99	54.974	ENSNGAG00000014101	Ncbp1	99	52.428	Nannospalax_galili
ENSCSAVG00000005300	-	75	57.207	ENSNBRG00000014674	NCBP1	96	57.207	Neolamprologus_brichardi
ENSCSAVG00000005300	-	99	53.927	ENSNLEG00000016909	NCBP1	99	53.576	Nomascus_leucogenys
ENSCSAVG00000005300	-	99	53.927	ENSMEUG00000010672	NCBP1	89	53.347	Notamacropus_eugenii
ENSCSAVG00000005300	-	77	77.419	ENSOPRG00000002144	-	78	49.668	Ochotona_princeps
ENSCSAVG00000005300	-	99	53.927	ENSODEG00000003232	NCBP1	99	53.729	Octodon_degus
ENSCSAVG00000005300	-	99	54.124	ENSONIG00000001502	NCBP1	99	53.375	Oreochromis_niloticus
ENSCSAVG00000005300	-	77	54.016	ENSOANG00000001918	NCBP1	99	54.016	Ornithorhynchus_anatinus
ENSCSAVG00000005300	-	96	52.665	ENSOCUG00000013853	NCBP1	96	52.792	Oryctolagus_cuniculus
ENSCSAVG00000005300	-	99	53.093	ENSORLG00000011008	NCBP1	99	53.109	Oryzias_latipes
ENSCSAVG00000005300	-	99	53.093	ENSORLG00020017455	NCBP1	99	53.234	Oryzias_latipes_hni
ENSCSAVG00000005300	-	99	52.020	ENSORLG00015012127	NCBP1	99	53.234	Oryzias_latipes_hsok
ENSCSAVG00000005300	-	99	51.515	ENSOMEG00000020698	NCBP1	99	52.985	Oryzias_melastigma
ENSCSAVG00000005300	-	99	53.927	ENSOGAG00000013888	NCBP1	99	53.051	Otolemur_garnettii
ENSCSAVG00000005300	-	99	54.450	ENSOARG00000011233	NCBP1	99	53.325	Ovis_aries
ENSCSAVG00000005300	-	99	53.927	ENSPPAG00000026462	NCBP1	99	53.576	Pan_paniscus
ENSCSAVG00000005300	-	99	53.927	ENSPPRG00000022574	NCBP1	99	53.199	Panthera_pardus
ENSCSAVG00000005300	-	99	53.927	ENSPTIG00000018507	NCBP1	99	53.199	Panthera_tigris_altaica
ENSCSAVG00000005300	-	99	53.927	ENSPTRG00000021167	NCBP1	99	53.576	Pan_troglodytes
ENSCSAVG00000005300	-	99	53.927	ENSPANG00000025591	NCBP1	99	53.576	Papio_anubis
ENSCSAVG00000005300	-	99	54.124	ENSPKIG00000015861	NCBP1	99	54.750	Paramormyrops_kingsleyae
ENSCSAVG00000005300	-	99	53.608	ENSPSIG00000009558	NCBP1	99	52.015	Pelodiscus_sinensis
ENSCSAVG00000005300	-	99	54.229	ENSPMGG00000020476	NCBP1	99	52.723	Periophthalmus_magnuspinnatus
ENSCSAVG00000005300	-	99	53.927	ENSPEMG00000020105	Ncbp1	99	52.055	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005300	-	99	54.639	ENSPMAG00000005533	NCBP1	99	49.312	Petromyzon_marinus
ENSCSAVG00000005300	-	99	53.927	ENSPCIG00000015800	NCBP1	98	55.000	Phascolarctos_cinereus
ENSCSAVG00000005300	-	99	53.030	ENSPFOG00000004158	NCBP1	99	53.483	Poecilia_formosa
ENSCSAVG00000005300	-	99	52.821	ENSPLAG00000020002	NCBP1	99	53.558	Poecilia_latipinna
ENSCSAVG00000005300	-	99	53.333	ENSPMEG00000019821	NCBP1	99	53.683	Poecilia_mexicana
ENSCSAVG00000005300	-	99	53.061	ENSPREG00000006035	NCBP1	99	53.616	Poecilia_reticulata
ENSCSAVG00000005300	-	99	53.927	ENSPPYG00000019426	NCBP1	99	53.576	Pongo_abelii
ENSCSAVG00000005300	-	99	53.403	ENSPCAG00000009943	NCBP1	83	56.115	Procavia_capensis
ENSCSAVG00000005300	-	99	53.927	ENSPCOG00000020024	NCBP1	98	54.362	Propithecus_coquereli
ENSCSAVG00000005300	-	99	53.403	ENSPVAG00000005924	NCBP1	99	53.074	Pteropus_vampyrus
ENSCSAVG00000005300	-	99	53.807	ENSPNYG00000002140	NCBP1	98	52.329	Pundamilia_nyererei
ENSCSAVG00000005300	-	99	56.477	ENSPNAG00000027753	NCBP1	99	53.191	Pygocentrus_nattereri
ENSCSAVG00000005300	-	99	53.927	ENSRNOG00000023605	Ncbp1	99	52.179	Rattus_norvegicus
ENSCSAVG00000005300	-	99	53.927	ENSRBIG00000043175	NCBP1	99	53.729	Rhinopithecus_bieti
ENSCSAVG00000005300	-	99	53.927	ENSRROG00000029767	NCBP1	99	53.729	Rhinopithecus_roxellana
ENSCSAVG00000005300	-	99	53.927	ENSSBOG00000019378	NCBP1	99	53.450	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005300	-	99	54.450	ENSSHAG00000015882	NCBP1	68	53.906	Sarcophilus_harrisii
ENSCSAVG00000005300	-	99	54.167	ENSSFOG00015001872	NCBP1	99	54.626	Scleropages_formosus
ENSCSAVG00000005300	-	99	53.608	ENSSMAG00000007463	NCBP1	99	53.250	Scophthalmus_maximus
ENSCSAVG00000005300	-	99	53.927	ENSSDUG00000007019	NCBP1	99	53.450	Seriola_dumerili
ENSCSAVG00000005300	-	99	53.093	ENSSLDG00000021924	NCBP1	99	53.375	Seriola_lalandi_dorsalis
ENSCSAVG00000005300	-	99	53.927	ENSSARG00000007274	NCBP1	79	53.333	Sorex_araneus
ENSCSAVG00000005300	-	99	54.974	ENSSPUG00000008609	NCBP1	99	48.741	Sphenodon_punctatus
ENSCSAVG00000005300	-	99	54.124	ENSSPAG00000012550	NCBP1	99	53.750	Stegastes_partitus
ENSCSAVG00000005300	-	99	53.927	ENSSSCG00000005366	NCBP1	99	53.199	Sus_scrofa
ENSCSAVG00000005300	-	99	52.577	ENSTGUG00000001472	NCBP1	99	50.000	Taeniopygia_guttata
ENSCSAVG00000005300	-	99	53.608	ENSTRUG00000005287	NCBP1	99	52.750	Takifugu_rubripes
ENSCSAVG00000005300	-	97	51.568	ENSTBEG00000004035	NCBP1	99	51.568	Tupaia_belangeri
ENSCSAVG00000005300	-	99	53.927	ENSTTRG00000000507	NCBP1	87	55.556	Tursiops_truncatus
ENSCSAVG00000005300	-	99	53.927	ENSUAMG00000005471	NCBP1	99	53.199	Ursus_americanus
ENSCSAVG00000005300	-	99	53.927	ENSUMAG00000011865	NCBP1	99	51.871	Ursus_maritimus
ENSCSAVG00000005300	-	99	53.927	ENSVPAG00000010537	NCBP1	99	50.188	Vicugna_pacos
ENSCSAVG00000005300	-	99	53.927	ENSVVUG00000019725	NCBP1	99	53.199	Vulpes_vulpes
ENSCSAVG00000005300	-	99	53.403	ENSXETG00000010179	ncbp1	99	52.190	Xenopus_tropicalis
ENSCSAVG00000005300	-	99	52.821	ENSXMAG00000018253	NCBP1	99	53.558	Xiphophorus_maculatus