EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005434 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2619 bases
Position: chrreftig_148:268667-271285
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009217	Trm112p	PF03966.16	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009334	-	719	-	ENSCSAVP00000009217	131 (aa)	-	H2YV57

Gene Model

Click here to download ENSCSAVG00000005434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005434	-	94	65.041	ENSAPOG00000017312	trmt112	100	65.041	Acanthochromis_polyacanthus
ENSCSAVG00000005434	-	94	64.228	ENSACIG00000022617	trmt112	100	64.228	Amphilophus_citrinellus
ENSCSAVG00000005434	-	94	65.041	ENSAOCG00000017062	trmt112	100	65.041	Amphiprion_ocellaris
ENSCSAVG00000005434	-	94	65.041	ENSAPEG00000009346	trmt112	100	65.041	Amphiprion_percula
ENSCSAVG00000005434	-	94	65.041	ENSATEG00000014617	trmt112	100	65.041	Anabas_testudineus
ENSCSAVG00000005434	-	93	57.258	ENSACAG00000027822	TRMT112	99	57.258	Anolis_carolinensis
ENSCSAVG00000005434	-	94	65.041	ENSACLG00000017728	trmt112	100	65.041	Astatotilapia_calliptera
ENSCSAVG00000005434	-	93	61.475	ENSAMXG00000036371	trmt112	99	61.475	Astyanax_mexicanus
ENSCSAVG00000005434	-	89	41.176	WBGene00007312	C04H5.1	95	41.176	Caenorhabditis_elegans
ENSCSAVG00000005434	-	69	52.688	ENSCPBG00000023458	TRMT112	85	52.688	Chrysemys_picta_bellii
ENSCSAVG00000005434	-	100	83.969	ENSCING00000024037	-	100	83.969	Ciona_intestinalis
ENSCSAVG00000005434	-	94	64.228	ENSCSEG00000005744	trmt112	100	64.228	Cynoglossus_semilaevis
ENSCSAVG00000005434	-	94	62.602	ENSCVAG00000006695	trmt112	100	62.602	Cyprinodon_variegatus
ENSCSAVG00000005434	-	93	60.656	ENSDARG00000071878	trmt112	100	60.656	Danio_rerio
ENSCSAVG00000005434	-	94	45.968	FBgn0037061	CG12975	100	45.968	Drosophila_melanogaster
ENSCSAVG00000005434	-	94	61.789	ENSELUG00000008404	trmt112	100	61.789	Esox_lucius
ENSCSAVG00000005434	-	94	60.976	ENSFHEG00000014947	trmt112	100	60.976	Fundulus_heteroclitus
ENSCSAVG00000005434	-	93	60.656	ENSGMOG00000008827	trmt112	99	60.656	Gadus_morhua
ENSCSAVG00000005434	-	94	63.710	ENSGAFG00000016649	trmt112	100	63.710	Gambusia_affinis
ENSCSAVG00000005434	-	94	61.789	ENSGACG00000016967	trmt112	100	61.789	Gasterosteus_aculeatus
ENSCSAVG00000005434	-	93	56.452	ENSGAGG00000019177	TRMT112	99	56.452	Gopherus_agassizii
ENSCSAVG00000005434	-	94	65.041	ENSHBUG00000012929	trmt112	100	65.041	Haplochromis_burtoni
ENSCSAVG00000005434	-	94	60.163	ENSHCOG00000020792	trmt112	100	60.163	Hippocampus_comes
ENSCSAVG00000005434	-	93	60.656	ENSIPUG00000019865	trmt112	99	60.656	Ictalurus_punctatus
ENSCSAVG00000005434	-	94	63.415	ENSKMAG00000003839	trmt112	100	63.415	Kryptolebias_marmoratus
ENSCSAVG00000005434	-	94	62.602	ENSLBEG00000006581	trmt112	100	62.602	Labrus_bergylta
ENSCSAVG00000005434	-	94	66.667	ENSLACG00000017896	TRMT112	100	66.667	Latimeria_chalumnae
ENSCSAVG00000005434	-	94	64.228	ENSMAMG00000021538	trmt112	100	64.228	Mastacembelus_armatus
ENSCSAVG00000005434	-	94	65.041	ENSMZEG00005004972	trmt112	100	65.041	Maylandia_zebra
ENSCSAVG00000005434	-	94	64.228	ENSMMOG00000002832	trmt112	100	64.228	Mola_mola
ENSCSAVG00000005434	-	94	60.484	ENSMALG00000011844	trmt112	100	60.484	Monopterus_albus
ENSCSAVG00000005434	-	94	64.228	ENSNBRG00000000922	trmt112	100	64.228	Neolamprologus_brichardi
ENSCSAVG00000005434	-	93	63.934	ENSONIG00000005384	trmt112	95	63.934	Oreochromis_niloticus
ENSCSAVG00000005434	-	94	61.789	ENSORLG00000002350	trmt112	100	61.789	Oryzias_latipes
ENSCSAVG00000005434	-	94	61.789	ENSORLG00020019463	trmt112	100	61.789	Oryzias_latipes_hni
ENSCSAVG00000005434	-	94	62.602	ENSORLG00015016835	trmt112	100	62.602	Oryzias_latipes_hsok
ENSCSAVG00000005434	-	94	60.976	ENSOMEG00000018315	trmt112	100	60.976	Oryzias_melastigma
ENSCSAVG00000005434	-	94	60.976	ENSPKIG00000025257	trmt112	100	60.976	Paramormyrops_kingsleyae
ENSCSAVG00000005434	-	93	56.452	ENSPSIG00000016819	TRMT112	99	56.452	Pelodiscus_sinensis
ENSCSAVG00000005434	-	94	60.976	ENSPMGG00000004948	trmt112	100	60.976	Periophthalmus_magnuspinnatus
ENSCSAVG00000005434	-	94	62.602	ENSPMAG00000004763	trmt112	100	62.602	Petromyzon_marinus
ENSCSAVG00000005434	-	94	62.602	ENSPFOG00000008627	trmt112	100	62.602	Poecilia_formosa
ENSCSAVG00000005434	-	94	62.602	ENSPLAG00000023490	trmt112	100	62.602	Poecilia_latipinna
ENSCSAVG00000005434	-	94	63.415	ENSPMEG00000005057	trmt112	100	63.415	Poecilia_mexicana
ENSCSAVG00000005434	-	94	63.415	ENSPREG00000015256	trmt112	100	63.415	Poecilia_reticulata
ENSCSAVG00000005434	-	93	62.295	ENSPNAG00000026665	trmt112	99	62.295	Pygocentrus_nattereri
ENSCSAVG00000005434	-	90	30.769	YNR046W	-	96	30.769	Saccharomyces_cerevisiae
ENSCSAVG00000005434	-	94	61.789	ENSSFOG00015007293	trmt112	100	61.789	Scleropages_formosus
ENSCSAVG00000005434	-	94	65.041	ENSSMAG00000017439	trmt112	100	65.041	Scophthalmus_maximus
ENSCSAVG00000005434	-	94	62.602	ENSSDUG00000017721	trmt112	100	62.602	Seriola_dumerili
ENSCSAVG00000005434	-	94	62.602	ENSSLDG00000016497	trmt112	100	62.602	Seriola_lalandi_dorsalis
ENSCSAVG00000005434	-	94	64.228	ENSSPAG00000007174	trmt112	100	64.228	Stegastes_partitus
ENSCSAVG00000005434	-	94	62.602	ENSTRUG00000013253	trmt112	100	62.602	Takifugu_rubripes
ENSCSAVG00000005434	-	93	59.016	ENSXETG00000007218	trmt112	99	59.016	Xenopus_tropicalis
ENSCSAVG00000005434	-	94	62.602	ENSXCOG00000001470	trmt112	100	62.602	Xiphophorus_couchianus
ENSCSAVG00000005434	-	94	62.602	ENSXMAG00000027506	trmt112	100	62.602	Xiphophorus_maculatus