EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000005450 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
6994 bases
Position
chrreftig_116:944635-951628
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000009246MMR_HSR1PF01926.233.3e-0511
ENSCSAVP00000009245MMR_HSR1PF01926.233.8e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000009362-1020-ENSCSAVP00000009245241 (aa)-H2YV85
ENSCSAVT00000009363-945-ENSCSAVP00000009246222 (aa)-H2YV86
ENSCSAVT00000009364-618-ENSCSAVP00000009247206 (aa)-H2YV87
Gene Model
Click here to download ENSCSAVG00000005450's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005450's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000005450-7734.659ENSCSAVG00000009147-8334.659
ENSCSAVG00000005450-6932.484ENSCSAVG00000000613-8332.484
ENSCSAVG00000005450-7832.461ENSCSAVG00000008684-9032.461
ENSCSAVG00000005450-7032.278ENSCSAVG00000001356-6532.278
ENSCSAVG00000005450-6833.117ENSCSAVG00000008995-9533.117
ENSCSAVG00000005450-6931.847ENSCSAVG00000000160-7231.847
ENSCSAVG00000005450-8133.173ENSCSAVG00000005689-9633.173
ENSCSAVG00000005450-6930.864ENSCSAVG00000011162-7730.864
ENSCSAVG00000005450-7130.818ENSCSAVG00000010348-7930.818
ENSCSAVG00000005450-6935.669ENSCSAVG00000002088-7235.669
ENSCSAVG00000005450-7938.500ENSCSAVG00000009503-9838.500
ENSCSAVG00000005450-7131.447ENSCSAVG00000009128-7532.075
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000005450-8767.526ENSLOCG00000017737-9867.513Lepisosteus_oculatus

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