EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005612 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2610 bases
Position: chrreftig_37:1267859-1270468
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009561	EMG1	PF03587.14	3.7e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009678	-	775	-	ENSCSAVP00000009561	236 (aa)	-	H2YW50

Gene Model

Click here to download ENSCSAVG00000005612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005612	-	86	75.980	ENSG00000126749	EMG1	84	75.980	Homo_sapiens
ENSCSAVG00000005612	-	100	64.407	ENSAPOG00000023213	emg1	99	64.407	Acanthochromis_polyacanthus
ENSCSAVG00000005612	-	98	68.103	ENSAMEG00000013753	EMG1	95	68.103	Ailuropoda_melanoleuca
ENSCSAVG00000005612	-	99	65.385	ENSACIG00000011786	emg1	98	65.385	Amphilophus_citrinellus
ENSCSAVG00000005612	-	100	65.254	ENSAOCG00000006520	emg1	96	65.254	Amphiprion_ocellaris
ENSCSAVG00000005612	-	100	65.254	ENSAPEG00000011094	emg1	96	65.254	Amphiprion_percula
ENSCSAVG00000005612	-	99	65.812	ENSATEG00000021642	emg1	98	65.812	Anabas_testudineus
ENSCSAVG00000005612	-	80	69.312	ENSAPLG00000005308	EMG1	100	69.312	Anas_platyrhynchos
ENSCSAVG00000005612	-	86	71.078	ENSACAG00000007210	EMG1	89	71.078	Anolis_carolinensis
ENSCSAVG00000005612	-	86	68.627	ENSANAG00000029536	-	83	68.627	Aotus_nancymaae
ENSCSAVG00000005612	-	86	75.122	ENSANAG00000022855	-	84	75.122	Aotus_nancymaae
ENSCSAVG00000005612	-	99	66.239	ENSACLG00000023688	emg1	98	66.239	Astatotilapia_calliptera
ENSCSAVG00000005612	-	98	66.379	ENSAMXG00000018994	emg1	97	66.379	Astyanax_mexicanus
ENSCSAVG00000005612	-	98	68.103	ENSBTAG00000013126	EMG1	67	68.103	Bos_taurus
ENSCSAVG00000005612	-	96	49.123	WBGene00012652	Y39A1A.14	99	49.123	Caenorhabditis_elegans
ENSCSAVG00000005612	-	86	75.000	ENSCJAG00000007120	EMG1	84	75.000	Callithrix_jacchus
ENSCSAVG00000005612	-	98	68.534	ENSCAFG00000014424	EMG1	95	68.534	Canis_familiaris
ENSCSAVG00000005612	-	98	68.534	ENSCAFG00020003127	EMG1	95	68.534	Canis_lupus_dingo
ENSCSAVG00000005612	-	98	68.534	ENSCHIG00000003188	EMG1	95	68.534	Capra_hircus
ENSCSAVG00000005612	-	64	75.497	ENSTSYG00000035847	EMG1	100	75.497	Carlito_syrichta
ENSCSAVG00000005612	-	64	74.834	ENSCAPG00000011212	EMG1	100	74.834	Cavia_aperea
ENSCSAVG00000005612	-	98	67.811	ENSCPOG00000025388	EMG1	95	67.811	Cavia_porcellus
ENSCSAVG00000005612	-	86	75.490	ENSCCAG00000033309	-	84	75.490	Cebus_capucinus
ENSCSAVG00000005612	-	62	57.823	ENSCCAG00000034889	-	85	57.823	Cebus_capucinus
ENSCSAVG00000005612	-	64	51.316	ENSCCAG00000024274	-	100	51.316	Cebus_capucinus
ENSCSAVG00000005612	-	86	75.490	ENSCATG00000016750	EMG1	84	75.490	Cercocebus_atys
ENSCSAVG00000005612	-	98	67.811	ENSCLAG00000015067	EMG1	95	67.811	Chinchilla_lanigera
ENSCSAVG00000005612	-	86	75.490	ENSCSAG00000010140	EMG1	84	75.490	Chlorocebus_sabaeus
ENSCSAVG00000005612	-	98	68.103	ENSCHOG00000002886	EMG1	95	68.103	Choloepus_hoffmanni
ENSCSAVG00000005612	-	72	72.189	ENSCPBG00000005167	EMG1	58	72.189	Chrysemys_picta_bellii
ENSCSAVG00000005612	-	100	87.342	ENSCING00000022202	-	100	87.342	Ciona_intestinalis
ENSCSAVG00000005612	-	89	64.593	ENSCANG00000042498	-	100	71.429	Colobus_angolensis_palliatus
ENSCSAVG00000005612	-	86	75.490	ENSCANG00000043101	-	84	75.490	Colobus_angolensis_palliatus
ENSCSAVG00000005612	-	88	75.000	ENSCGRG00001018228	Emg1	85	75.000	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005612	-	88	75.000	ENSCGRG00000018238	Emg1	85	75.000	Cricetulus_griseus_crigri
ENSCSAVG00000005612	-	98	63.830	ENSCSEG00000020136	emg1	97	63.830	Cynoglossus_semilaevis
ENSCSAVG00000005612	-	100	65.690	ENSCVAG00000001164	emg1	100	65.690	Cyprinodon_variegatus
ENSCSAVG00000005612	-	98	64.655	ENSDARG00000056914	emg1	97	64.655	Danio_rerio
ENSCSAVG00000005612	-	86	75.490	ENSDNOG00000005533	EMG1	95	68.670	Dasypus_novemcinctus
ENSCSAVG00000005612	-	84	72.222	ENSDORG00000009795	Emg1	85	72.222	Dipodomys_ordii
ENSCSAVG00000005612	-	99	58.197	FBgn0029714	CG3527	97	58.197	Drosophila_melanogaster
ENSCSAVG00000005612	-	64	51.316	ENSETEG00000009111	-	99	51.316	Echinops_telfairi
ENSCSAVG00000005612	-	88	64.904	ENSEBUG00000008287	emg1	82	64.904	Eptatretus_burgeri
ENSCSAVG00000005612	-	86	75.980	ENSEASG00005016018	EMG1	84	75.980	Equus_asinus_asinus
ENSCSAVG00000005612	-	86	75.490	ENSECAG00000022412	EMG1	84	75.490	Equus_caballus
ENSCSAVG00000005612	-	86	75.000	ENSEEUG00000000065	EMG1	84	75.000	Erinaceus_europaeus
ENSCSAVG00000005612	-	98	68.966	ENSFCAG00000004288	EMG1	95	68.966	Felis_catus
ENSCSAVG00000005612	-	86	73.529	ENSFALG00000004617	EMG1	96	67.094	Ficedula_albicollis
ENSCSAVG00000005612	-	98	69.099	ENSFDAG00000011086	EMG1	95	69.099	Fukomys_damarensis
ENSCSAVG00000005612	-	54	56.250	ENSFHEG00000014307	emg1	81	56.250	Fundulus_heteroclitus
ENSCSAVG00000005612	-	98	63.362	ENSGMOG00000011025	emg1	95	63.362	Gadus_morhua
ENSCSAVG00000005612	-	98	65.801	ENSGALG00000014568	EMG1	98	65.801	Gallus_gallus
ENSCSAVG00000005612	-	98	65.385	ENSGAFG00000014143	emg1	98	65.385	Gambusia_affinis
ENSCSAVG00000005612	-	98	65.665	ENSGACG00000010330	emg1	95	65.665	Gasterosteus_aculeatus
ENSCSAVG00000005612	-	80	71.429	ENSGAGG00000005641	EMG1	100	72.185	Gopherus_agassizii
ENSCSAVG00000005612	-	86	75.000	ENSGGOG00000004287	EMG1	84	75.000	Gorilla_gorilla
ENSCSAVG00000005612	-	99	66.239	ENSHBUG00000014862	emg1	98	66.239	Haplochromis_burtoni
ENSCSAVG00000005612	-	86	75.000	ENSHGLG00000001300	EMG1	83	75.000	Heterocephalus_glaber_female
ENSCSAVG00000005612	-	86	75.000	ENSHGLG00100011644	EMG1	83	75.000	Heterocephalus_glaber_male
ENSCSAVG00000005612	-	98	67.241	ENSHCOG00000017870	emg1	97	67.241	Hippocampus_comes
ENSCSAVG00000005612	-	98	65.948	ENSIPUG00000008261	emg1	97	65.948	Ictalurus_punctatus
ENSCSAVG00000005612	-	98	68.398	ENSSTOG00000000387	EMG1	95	68.398	Ictidomys_tridecemlineatus
ENSCSAVG00000005612	-	97	68.421	ENSJJAG00000018448	Emg1	93	68.421	Jaculus_jaculus
ENSCSAVG00000005612	-	99	65.532	ENSKMAG00000007069	emg1	98	65.532	Kryptolebias_marmoratus
ENSCSAVG00000005612	-	99	65.812	ENSLBEG00000007424	emg1	98	65.812	Labrus_bergylta
ENSCSAVG00000005612	-	99	63.830	ENSLOCG00000008451	emg1	96	63.830	Lepisosteus_oculatus
ENSCSAVG00000005612	-	86	75.490	ENSLAFG00000001314	EMG1	84	75.490	Loxodonta_africana
ENSCSAVG00000005612	-	86	75.490	ENSMFAG00000037142	EMG1	84	75.490	Macaca_fascicularis
ENSCSAVG00000005612	-	86	75.490	ENSMMUG00000010207	EMG1	84	75.490	Macaca_mulatta
ENSCSAVG00000005612	-	86	75.490	ENSMNEG00000040907	EMG1	84	75.490	Macaca_nemestrina
ENSCSAVG00000005612	-	86	75.490	ENSMLEG00000026029	EMG1	84	75.490	Mandrillus_leucophaeus
ENSCSAVG00000005612	-	98	66.810	ENSMAMG00000001888	emg1	97	66.810	Mastacembelus_armatus
ENSCSAVG00000005612	-	99	66.239	ENSMZEG00005017546	emg1	98	66.239	Maylandia_zebra
ENSCSAVG00000005612	-	86	71.569	ENSMGAG00000014145	EMG1	98	64.407	Meleagris_gallopavo
ENSCSAVG00000005612	-	88	74.519	ENSMAUG00000011093	Emg1	85	74.519	Mesocricetus_auratus
ENSCSAVG00000005612	-	97	68.860	ENSMICG00000001790	EMG1	93	68.860	Microcebus_murinus
ENSCSAVG00000005612	-	98	67.672	ENSMOCG00000022570	Emg1	95	67.672	Microtus_ochrogaster
ENSCSAVG00000005612	-	99	64.957	ENSMMOG00000016090	emg1	98	64.957	Mola_mola
ENSCSAVG00000005612	-	88	74.519	ENSMODG00000018161	EMG1	93	68.966	Monodelphis_domestica
ENSCSAVG00000005612	-	98	66.379	ENSMALG00000022477	emg1	97	66.379	Monopterus_albus
ENSCSAVG00000005612	-	86	73.039	MGP_CAROLIEiJ_G0028844	Emg1	84	73.039	Mus_caroli
ENSCSAVG00000005612	-	98	67.241	ENSMUSG00000004268	Emg1	95	67.241	Mus_musculus
ENSCSAVG00000005612	-	86	73.039	MGP_PahariEiJ_G0022605	Emg1	84	73.039	Mus_pahari
ENSCSAVG00000005612	-	86	73.529	MGP_SPRETEiJ_G0029886	Emg1	84	73.529	Mus_spretus
ENSCSAVG00000005612	-	98	68.534	ENSMPUG00000016763	EMG1	95	68.534	Mustela_putorius_furo
ENSCSAVG00000005612	-	86	73.786	ENSMLUG00000009196	EMG1	84	73.786	Myotis_lucifugus
ENSCSAVG00000005612	-	96	69.469	ENSNGAG00000022592	Emg1	94	69.469	Nannospalax_galili
ENSCSAVG00000005612	-	99	66.239	ENSNBRG00000001192	emg1	98	66.239	Neolamprologus_brichardi
ENSCSAVG00000005612	-	86	75.490	ENSNLEG00000005080	EMG1	84	75.490	Nomascus_leucogenys
ENSCSAVG00000005612	-	79	76.344	ENSMEUG00000000831	EMG1	82	76.344	Notamacropus_eugenii
ENSCSAVG00000005612	-	61	69.178	ENSOPRG00000004071	-	92	69.178	Ochotona_princeps
ENSCSAVG00000005612	-	80	73.936	ENSOPRG00000016878	-	100	73.936	Ochotona_princeps
ENSCSAVG00000005612	-	88	73.077	ENSODEG00000004059	EMG1	86	73.077	Octodon_degus
ENSCSAVG00000005612	-	99	64.957	ENSONIG00000012893	emg1	98	64.957	Oreochromis_niloticus
ENSCSAVG00000005612	-	98	69.697	ENSOCUG00000003603	EMG1	95	69.697	Oryctolagus_cuniculus
ENSCSAVG00000005612	-	99	65.957	ENSORLG00000012146	emg1	95	65.957	Oryzias_latipes
ENSCSAVG00000005612	-	99	65.957	ENSORLG00020005499	emg1	98	65.957	Oryzias_latipes_hni
ENSCSAVG00000005612	-	99	65.957	ENSORLG00015011535	emg1	98	65.957	Oryzias_latipes_hsok
ENSCSAVG00000005612	-	99	66.383	ENSOMEG00000012687	emg1	98	66.383	Oryzias_melastigma
ENSCSAVG00000005612	-	86	75.000	ENSOGAG00000006975	EMG1	84	75.000	Otolemur_garnettii
ENSCSAVG00000005612	-	98	67.949	ENSOARG00000004923	EMG1	95	67.949	Ovis_aries
ENSCSAVG00000005612	-	86	75.980	ENSPPAG00000033046	EMG1	84	75.980	Pan_paniscus
ENSCSAVG00000005612	-	98	68.966	ENSPPRG00000012350	EMG1	95	68.966	Panthera_pardus
ENSCSAVG00000005612	-	98	68.966	ENSPTIG00000000358	EMG1	95	68.966	Panthera_tigris_altaica
ENSCSAVG00000005612	-	86	75.980	ENSPTRG00000048050	EMG1	84	75.980	Pan_troglodytes
ENSCSAVG00000005612	-	86	75.490	ENSPANG00000019398	-	84	75.490	Papio_anubis
ENSCSAVG00000005612	-	86	75.980	ENSPANG00000005523	-	84	75.980	Papio_anubis
ENSCSAVG00000005612	-	99	64.530	ENSPKIG00000025303	emg1	97	64.530	Paramormyrops_kingsleyae
ENSCSAVG00000005612	-	86	70.098	ENSPSIG00000011094	EMG1	88	70.098	Pelodiscus_sinensis
ENSCSAVG00000005612	-	99	66.667	ENSPMGG00000019918	emg1	99	66.667	Periophthalmus_magnuspinnatus
ENSCSAVG00000005612	-	98	68.534	ENSPEMG00000010244	Emg1	95	68.534	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005612	-	89	73.684	ENSPCIG00000002814	EMG1	86	73.684	Phascolarctos_cinereus
ENSCSAVG00000005612	-	98	64.530	ENSPFOG00000013034	emg1	98	64.530	Poecilia_formosa
ENSCSAVG00000005612	-	98	64.530	ENSPLAG00000000125	emg1	98	64.530	Poecilia_latipinna
ENSCSAVG00000005612	-	98	64.957	ENSPMEG00000016802	emg1	98	64.957	Poecilia_mexicana
ENSCSAVG00000005612	-	98	64.103	ENSPREG00000010409	emg1	80	64.103	Poecilia_reticulata
ENSCSAVG00000005612	-	86	75.980	ENSPPYG00000004215	EMG1	84	75.980	Pongo_abelii
ENSCSAVG00000005612	-	88	62.500	ENSPCAG00000012368	EMG1	83	62.500	Procavia_capensis
ENSCSAVG00000005612	-	97	68.860	ENSPCOG00000028560	EMG1	93	68.860	Propithecus_coquereli
ENSCSAVG00000005612	-	97	68.696	ENSPVAG00000006030	EMG1	94	68.696	Pteropus_vampyrus
ENSCSAVG00000005612	-	99	66.239	ENSPNYG00000023172	emg1	98	66.239	Pundamilia_nyererei
ENSCSAVG00000005612	-	98	64.224	ENSPNAG00000019953	emg1	97	64.224	Pygocentrus_nattereri
ENSCSAVG00000005612	-	86	74.020	ENSRNOG00000012828	Emg1	84	74.020	Rattus_norvegicus
ENSCSAVG00000005612	-	86	75.980	ENSRBIG00000031315	EMG1	84	75.980	Rhinopithecus_bieti
ENSCSAVG00000005612	-	86	75.980	ENSRROG00000032961	EMG1	84	75.980	Rhinopithecus_roxellana
ENSCSAVG00000005612	-	89	53.363	YLR186W	EMG1	88	53.363	Saccharomyces_cerevisiae
ENSCSAVG00000005612	-	86	51.232	ENSSBOG00000022895	-	81	51.232	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005612	-	86	75.000	ENSSBOG00000029143	-	84	75.000	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005612	-	88	74.038	ENSSHAG00000016428	EMG1	95	68.534	Sarcophilus_harrisii
ENSCSAVG00000005612	-	98	65.665	ENSSFOG00015002421	emg1	97	65.665	Scleropages_formosus
ENSCSAVG00000005612	-	98	65.948	ENSSMAG00000011806	emg1	97	65.948	Scophthalmus_maximus
ENSCSAVG00000005612	-	98	65.948	ENSSDUG00000011345	emg1	92	65.948	Seriola_dumerili
ENSCSAVG00000005612	-	99	65.385	ENSSLDG00000023439	emg1	93	65.385	Seriola_lalandi_dorsalis
ENSCSAVG00000005612	-	97	53.947	ENSSARG00000002227	EMG1	93	53.947	Sorex_araneus
ENSCSAVG00000005612	-	86	69.118	ENSSPUG00000014446	EMG1	87	69.118	Sphenodon_punctatus
ENSCSAVG00000005612	-	99	65.532	ENSSPAG00000005460	emg1	99	65.532	Stegastes_partitus
ENSCSAVG00000005612	-	98	68.103	ENSSSCG00000026812	EMG1	95	68.103	Sus_scrofa
ENSCSAVG00000005612	-	86	73.529	ENSTGUG00000013271	EMG1	99	73.529	Taeniopygia_guttata
ENSCSAVG00000005612	-	98	66.379	ENSTRUG00000001906	emg1	97	66.379	Takifugu_rubripes
ENSCSAVG00000005612	-	98	65.517	ENSTNIG00000008047	emg1	95	65.517	Tetraodon_nigroviridis
ENSCSAVG00000005612	-	86	74.510	ENSTBEG00000015406	EMG1	98	74.510	Tupaia_belangeri
ENSCSAVG00000005612	-	98	56.897	ENSTTRG00000004810	EMG1	95	56.897	Tursiops_truncatus
ENSCSAVG00000005612	-	98	68.534	ENSUAMG00000026959	EMG1	95	68.534	Ursus_americanus
ENSCSAVG00000005612	-	98	68.376	ENSUMAG00000003248	EMG1	96	68.376	Ursus_maritimus
ENSCSAVG00000005612	-	86	75.490	ENSVVUG00000010807	EMG1	84	75.490	Vulpes_vulpes
ENSCSAVG00000005612	-	86	69.951	ENSXETG00000023917	emg1	99	69.951	Xenopus_tropicalis
ENSCSAVG00000005612	-	98	64.530	ENSXMAG00000011508	emg1	98	64.530	Xiphophorus_maculatus