EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000005685 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 498 bases
Position: chrreftig_148:311515-312012
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009685	RRM_1	PF00076.22	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009803	-	498	-	ENSCSAVP00000009685	165 (aa)	-	H2YWH4

Gene Model

Click here to download ENSCSAVG00000005685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000005685	-	59	32.877	ENSCSAVG00000003440	-	52	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005685	-	89	66.887	ENSG00000265241	RBM8A	89	65.806	Homo_sapiens
ENSCSAVG00000005685	-	93	63.924	ENSAPOG00000009727	rbm8a	89	64.516	Acanthochromis_polyacanthus
ENSCSAVG00000005685	-	89	61.688	ENSAMEG00000017623	RBM8A	89	63.924	Ailuropoda_melanoleuca
ENSCSAVG00000005685	-	95	63.750	ENSACIG00000017678	rbm8a	97	64.516	Amphilophus_citrinellus
ENSCSAVG00000005685	-	93	63.924	ENSAOCG00000023887	rbm8a	75	64.516	Amphiprion_ocellaris
ENSCSAVG00000005685	-	93	63.924	ENSAPEG00000022847	rbm8a	75	64.516	Amphiprion_percula
ENSCSAVG00000005685	-	93	63.924	ENSATEG00000005630	rbm8a	89	64.516	Anabas_testudineus
ENSCSAVG00000005685	-	89	65.563	ENSANAG00000004525	RBM8A	89	64.516	Aotus_nancymaae
ENSCSAVG00000005685	-	93	63.291	ENSACLG00000009627	rbm8a	89	63.871	Astatotilapia_calliptera
ENSCSAVG00000005685	-	89	64.901	ENSAMXG00000040754	rbm8a	89	63.871	Astyanax_mexicanus
ENSCSAVG00000005685	-	86	53.103	WBGene00004387	rnp-4	94	55.474	Caenorhabditis_elegans
ENSCSAVG00000005685	-	89	65.563	ENSCJAG00000046869	RBM8A	89	64.516	Callithrix_jacchus
ENSCSAVG00000005685	-	89	65.563	ENSCAFG00000023172	RBM8A	89	64.516	Canis_familiaris
ENSCSAVG00000005685	-	89	65.563	ENSCAFG00020019945	RBM8A	89	64.516	Canis_lupus_dingo
ENSCSAVG00000005685	-	89	65.563	ENSCHIG00000012114	RBM8A	89	64.516	Capra_hircus
ENSCSAVG00000005685	-	89	65.563	ENSTSYG00000028809	RBM8A	89	64.516	Carlito_syrichta
ENSCSAVG00000005685	-	64	70.755	ENSCAPG00000014086	RBM8A	84	71.845	Cavia_aperea
ENSCSAVG00000005685	-	93	63.924	ENSCPOG00000022453	RBM8A	97	60.241	Cavia_porcellus
ENSCSAVG00000005685	-	89	64.901	ENSCCAG00000022460	-	89	63.871	Cebus_capucinus
ENSCSAVG00000005685	-	89	65.563	ENSCCAG00000028589	-	89	64.516	Cebus_capucinus
ENSCSAVG00000005685	-	89	65.563	ENSCATG00000021691	RBM8A	89	64.516	Cercocebus_atys
ENSCSAVG00000005685	-	89	65.563	ENSCLAG00000000547	RBM8A	89	64.516	Chinchilla_lanigera
ENSCSAVG00000005685	-	89	65.563	ENSCSAG00000001779	RBM8A	89	64.516	Chlorocebus_sabaeus
ENSCSAVG00000005685	-	89	65.563	ENSCPBG00000007941	RBM8A	71	64.516	Chrysemys_picta_bellii
ENSCSAVG00000005685	-	94	91.613	ENSCING00000004877	-	92	91.447	Ciona_intestinalis
ENSCSAVG00000005685	-	89	65.563	ENSCANG00000042182	RBM8A	89	64.516	Colobus_angolensis_palliatus
ENSCSAVG00000005685	-	89	65.563	ENSCGRG00001002681	-	89	64.516	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005685	-	92	55.769	ENSCGRG00001003032	-	89	55.128	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005685	-	89	65.563	ENSCGRG00000006832	-	89	64.516	Cricetulus_griseus_crigri
ENSCSAVG00000005685	-	93	63.291	ENSCSEG00000011865	rbm8a	89	63.871	Cynoglossus_semilaevis
ENSCSAVG00000005685	-	93	64.744	ENSCVAG00000020734	rbm8a	88	65.359	Cyprinodon_variegatus
ENSCSAVG00000005685	-	92	63.871	ENSDARG00000016516	rbm8a	89	63.871	Danio_rerio
ENSCSAVG00000005685	-	53	61.798	ENSDNOG00000025265	-	98	61.798	Dasypus_novemcinctus
ENSCSAVG00000005685	-	89	65.563	ENSDORG00000027340	-	97	60.241	Dipodomys_ordii
ENSCSAVG00000005685	-	100	52.941	FBgn0033378	tsu	93	55.484	Drosophila_melanogaster
ENSCSAVG00000005685	-	92	56.774	ENSETEG00000017932	-	89	56.774	Echinops_telfairi
ENSCSAVG00000005685	-	84	63.636	ENSETEG00000008411	-	81	63.636	Echinops_telfairi
ENSCSAVG00000005685	-	92	64.516	ENSEBUG00000010386	rbm8a	89	64.516	Eptatretus_burgeri
ENSCSAVG00000005685	-	89	65.563	ENSEASG00005007455	RBM8A	89	64.516	Equus_asinus_asinus
ENSCSAVG00000005685	-	89	65.563	ENSECAG00000022024	RBM8A	89	64.516	Equus_caballus
ENSCSAVG00000005685	-	89	40.397	ENSEEUG00000008823	RBM8A	89	40.000	Erinaceus_europaeus
ENSCSAVG00000005685	-	92	64.516	ENSELUG00000012464	rbm8a	89	64.516	Esox_lucius
ENSCSAVG00000005685	-	89	66.887	ENSFCAG00000033936	RBM8A	89	65.806	Felis_catus
ENSCSAVG00000005685	-	89	65.563	ENSFDAG00000020821	RBM8A	89	64.516	Fukomys_damarensis
ENSCSAVG00000005685	-	93	65.385	ENSFHEG00000013538	rbm8a	88	66.013	Fundulus_heteroclitus
ENSCSAVG00000005685	-	84	62.590	ENSGMOG00000007353	rbm8a	87	63.235	Gadus_morhua
ENSCSAVG00000005685	-	89	61.745	ENSGALG00000036283	RBM8A	88	60.784	Gallus_gallus
ENSCSAVG00000005685	-	93	64.557	ENSGAFG00000021698	rbm8a	89	65.161	Gambusia_affinis
ENSCSAVG00000005685	-	73	63.934	ENSGACG00000013157	rbm8a	87	62.500	Gasterosteus_aculeatus
ENSCSAVG00000005685	-	89	65.563	ENSGAGG00000023769	RBM8A	89	64.516	Gopherus_agassizii
ENSCSAVG00000005685	-	89	65.563	ENSGGOG00000037248	RBM8A	89	64.516	Gorilla_gorilla
ENSCSAVG00000005685	-	95	63.125	ENSHBUG00000008827	rbm8a	97	63.871	Haplochromis_burtoni
ENSCSAVG00000005685	-	89	65.563	ENSHGLG00000007303	RBM8A	89	64.516	Heterocephalus_glaber_female
ENSCSAVG00000005685	-	89	65.563	ENSHGLG00100012468	RBM8A	89	64.516	Heterocephalus_glaber_male
ENSCSAVG00000005685	-	92	63.399	ENSHCOG00000010122	rbm8a	88	63.399	Hippocampus_comes
ENSCSAVG00000005685	-	92	65.385	ENSIPUG00000006525	rbm8a	80	65.385	Ictalurus_punctatus
ENSCSAVG00000005685	-	89	65.563	ENSSTOG00000013917	RBM8A	89	64.516	Ictidomys_tridecemlineatus
ENSCSAVG00000005685	-	89	65.563	ENSJJAG00000009488	-	89	64.516	Jaculus_jaculus
ENSCSAVG00000005685	-	93	63.291	ENSKMAG00000014454	rbm8a	89	63.871	Kryptolebias_marmoratus
ENSCSAVG00000005685	-	93	64.557	ENSLBEG00000015720	rbm8a	89	65.161	Labrus_bergylta
ENSCSAVG00000005685	-	92	62.420	ENSLACG00000014365	RBM8A	89	62.420	Latimeria_chalumnae
ENSCSAVG00000005685	-	92	64.516	ENSLOCG00000009082	rbm8a	89	64.516	Lepisosteus_oculatus
ENSCSAVG00000005685	-	95	47.590	ENSLAFG00000011031	-	87	49.045	Loxodonta_africana
ENSCSAVG00000005685	-	92	64.516	ENSLAFG00000021886	-	89	64.516	Loxodonta_africana
ENSCSAVG00000005685	-	89	66.887	ENSMFAG00000045376	RBM8A	89	65.806	Macaca_fascicularis
ENSCSAVG00000005685	-	95	59.880	ENSMMUG00000016051	RBM8A	97	61.728	Macaca_mulatta
ENSCSAVG00000005685	-	89	65.563	ENSMNEG00000040422	RBM8A	89	64.516	Macaca_nemestrina
ENSCSAVG00000005685	-	89	65.563	ENSMLEG00000039155	RBM8A	89	64.516	Mandrillus_leucophaeus
ENSCSAVG00000005685	-	93	63.291	ENSMAMG00000010565	rbm8a	89	63.871	Mastacembelus_armatus
ENSCSAVG00000005685	-	93	63.291	ENSMZEG00005016453	rbm8a	89	63.871	Maylandia_zebra
ENSCSAVG00000005685	-	95	60.000	ENSMAUG00000016783	-	97	60.606	Mesocricetus_auratus
ENSCSAVG00000005685	-	89	65.563	ENSMICG00000031698	-	89	64.516	Microcebus_murinus
ENSCSAVG00000005685	-	90	56.579	ENSMICG00000037163	-	93	57.333	Microcebus_murinus
ENSCSAVG00000005685	-	89	65.563	ENSMOCG00000017782	-	89	64.516	Microtus_ochrogaster
ENSCSAVG00000005685	-	95	57.325	ENSMMOG00000017179	rbm8a	91	57.895	Mola_mola
ENSCSAVG00000005685	-	89	64.901	ENSMODG00000018752	RBM8A	89	63.871	Monodelphis_domestica
ENSCSAVG00000005685	-	93	63.924	ENSMALG00000010145	rbm8a	89	64.516	Monopterus_albus
ENSCSAVG00000005685	-	89	64.238	MGP_CAROLIEiJ_G0014951	Rbm8a2	89	63.226	Mus_caroli
ENSCSAVG00000005685	-	89	66.887	MGP_CAROLIEiJ_G0025383	Rbm8a	97	60.241	Mus_caroli
ENSCSAVG00000005685	-	89	66.887	ENSMUSG00000038374	Rbm8a	97	60.843	Mus_musculus
ENSCSAVG00000005685	-	89	64.901	ENSMUSG00000078184	Rbm8a2	89	63.871	Mus_musculus
ENSCSAVG00000005685	-	89	66.887	MGP_PahariEiJ_G0026828	-	97	60.241	Mus_pahari
ENSCSAVG00000005685	-	89	66.887	MGP_SPRETEiJ_G0026330	Rbm8a	97	60.843	Mus_spretus
ENSCSAVG00000005685	-	89	65.563	ENSMPUG00000000775	RBM8A	89	64.516	Mustela_putorius_furo
ENSCSAVG00000005685	-	89	64.189	ENSMLUG00000022711	-	89	63.158	Myotis_lucifugus
ENSCSAVG00000005685	-	89	65.563	ENSMLUG00000017436	-	89	64.516	Myotis_lucifugus
ENSCSAVG00000005685	-	92	64.516	ENSNGAG00000016038	-	89	64.516	Nannospalax_galili
ENSCSAVG00000005685	-	93	63.291	ENSNBRG00000004541	rbm8a	89	63.871	Neolamprologus_brichardi
ENSCSAVG00000005685	-	89	65.563	ENSNLEG00000029632	RBM8A	89	64.516	Nomascus_leucogenys
ENSCSAVG00000005685	-	62	73.077	ENSMEUG00000016058	RBM8A	79	71.845	Notamacropus_eugenii
ENSCSAVG00000005685	-	67	64.912	ENSOPRG00000013316	RBM8A	100	64.912	Ochotona_princeps
ENSCSAVG00000005685	-	89	56.667	ENSODEG00000002094	-	88	55.844	Octodon_degus
ENSCSAVG00000005685	-	89	65.563	ENSODEG00000000114	-	89	64.516	Octodon_degus
ENSCSAVG00000005685	-	89	57.333	ENSODEG00000008563	-	89	56.494	Octodon_degus
ENSCSAVG00000005685	-	93	63.291	ENSONIG00000008608	rbm8a	89	63.871	Oreochromis_niloticus
ENSCSAVG00000005685	-	89	61.688	ENSOCUG00000025693	RBM8A	89	63.924	Oryctolagus_cuniculus
ENSCSAVG00000005685	-	93	64.557	ENSORLG00000016263	rbm8a	89	65.161	Oryzias_latipes
ENSCSAVG00000005685	-	96	64.417	ENSORLG00020012904	rbm8a	82	65.161	Oryzias_latipes_hni
ENSCSAVG00000005685	-	93	64.557	ENSORLG00015018824	rbm8a	89	65.161	Oryzias_latipes_hsok
ENSCSAVG00000005685	-	93	65.190	ENSOMEG00000021533	rbm8a	69	65.806	Oryzias_melastigma
ENSCSAVG00000005685	-	89	61.688	ENSOGAG00000000202	RBM8A	89	63.924	Otolemur_garnettii
ENSCSAVG00000005685	-	89	65.563	ENSOARG00000020634	RBM8A	89	64.516	Ovis_aries
ENSCSAVG00000005685	-	89	65.563	ENSPPAG00000029116	RBM8A	89	64.516	Pan_paniscus
ENSCSAVG00000005685	-	89	66.887	ENSPPRG00000008243	RBM8A	89	65.806	Panthera_pardus
ENSCSAVG00000005685	-	89	65.563	ENSPTIG00000009472	RBM8A	89	64.516	Panthera_tigris_altaica
ENSCSAVG00000005685	-	89	65.563	ENSPTRG00000001201	RBM8A	89	64.516	Pan_troglodytes
ENSCSAVG00000005685	-	89	65.563	ENSPANG00000020584	RBM8A	89	64.516	Papio_anubis
ENSCSAVG00000005685	-	92	66.883	ENSPKIG00000020558	rbm8a	89	66.883	Paramormyrops_kingsleyae
ENSCSAVG00000005685	-	92	66.026	ENSPKIG00000009551	rbm8a	66	66.026	Paramormyrops_kingsleyae
ENSCSAVG00000005685	-	93	63.924	ENSPMGG00000010122	rbm8a	89	64.516	Periophthalmus_magnuspinnatus
ENSCSAVG00000005685	-	89	65.563	ENSPEMG00000018117	-	89	64.516	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005685	-	89	64.901	ENSPCIG00000011931	RBM8A	89	63.871	Phascolarctos_cinereus
ENSCSAVG00000005685	-	93	65.190	ENSPFOG00000010695	rbm8a	89	65.806	Poecilia_formosa
ENSCSAVG00000005685	-	93	65.190	ENSPLAG00000009183	rbm8a	89	65.806	Poecilia_latipinna
ENSCSAVG00000005685	-	93	65.190	ENSPMEG00000013950	rbm8a	89	65.806	Poecilia_mexicana
ENSCSAVG00000005685	-	95	64.375	ENSPREG00000017572	rbm8a	97	65.161	Poecilia_reticulata
ENSCSAVG00000005685	-	89	65.563	ENSPPYG00000000929	RBM8A	89	64.516	Pongo_abelii
ENSCSAVG00000005685	-	92	64.516	ENSPCAG00000002146	-	89	64.516	Procavia_capensis
ENSCSAVG00000005685	-	89	65.563	ENSPCOG00000022886	RBM8A	89	64.516	Propithecus_coquereli
ENSCSAVG00000005685	-	89	65.563	ENSPVAG00000014471	RBM8A	89	64.516	Pteropus_vampyrus
ENSCSAVG00000005685	-	93	63.291	ENSPNYG00000013564	rbm8a	89	63.871	Pundamilia_nyererei
ENSCSAVG00000005685	-	92	64.516	ENSPNAG00000028502	rbm8a	89	64.516	Pygocentrus_nattereri
ENSCSAVG00000005685	-	89	65.563	ENSRNOG00000021215	Rbm8a	89	64.516	Rattus_norvegicus
ENSCSAVG00000005685	-	89	66.887	ENSRBIG00000039233	RBM8A	89	65.806	Rhinopithecus_bieti
ENSCSAVG00000005685	-	89	62.914	ENSRROG00000033023	-	89	61.935	Rhinopithecus_roxellana
ENSCSAVG00000005685	-	89	65.563	ENSRROG00000040324	-	89	64.516	Rhinopithecus_roxellana
ENSCSAVG00000005685	-	89	65.563	ENSSBOG00000031316	RBM8A	89	64.516	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005685	-	89	64.901	ENSSHAG00000018629	RBM8A	89	63.871	Sarcophilus_harrisii
ENSCSAVG00000005685	-	92	66.026	ENSSFOG00015024171	rbm8a	89	66.026	Scleropages_formosus
ENSCSAVG00000005685	-	92	67.308	ENSSFOG00015009007	rbm8a	89	67.308	Scleropages_formosus
ENSCSAVG00000005685	-	93	62.658	ENSSMAG00000012998	rbm8a	89	63.226	Scophthalmus_maximus
ENSCSAVG00000005685	-	93	63.924	ENSSDUG00000005911	rbm8a	89	64.516	Seriola_dumerili
ENSCSAVG00000005685	-	93	63.924	ENSSLDG00000011664	rbm8a	89	64.516	Seriola_lalandi_dorsalis
ENSCSAVG00000005685	-	89	65.563	ENSSARG00000013289	RBM8A	89	64.516	Sorex_araneus
ENSCSAVG00000005685	-	89	66.225	ENSSPUG00000001576	RBM8A	89	65.161	Sphenodon_punctatus
ENSCSAVG00000005685	-	93	63.924	ENSSPAG00000012181	rbm8a	89	64.516	Stegastes_partitus
ENSCSAVG00000005685	-	89	65.563	ENSSSCG00000028509	RBM8A	89	64.516	Sus_scrofa
ENSCSAVG00000005685	-	89	64.901	ENSTGUG00000004447	RBM8A	89	63.871	Taeniopygia_guttata
ENSCSAVG00000005685	-	93	62.821	ENSTRUG00000013173	rbm8a	88	63.399	Takifugu_rubripes
ENSCSAVG00000005685	-	93	62.658	ENSTNIG00000006869	rbm8a	89	63.226	Tetraodon_nigroviridis
ENSCSAVG00000005685	-	67	64.912	ENSTBEG00000014947	RBM8A	100	64.912	Tupaia_belangeri
ENSCSAVG00000005685	-	69	67.826	ENSTTRG00000009081	RBM8A	87	64.885	Tursiops_truncatus
ENSCSAVG00000005685	-	89	65.563	ENSUAMG00000021929	RBM8A	89	64.516	Ursus_americanus
ENSCSAVG00000005685	-	89	65.563	ENSUMAG00000010298	RBM8A	89	64.516	Ursus_maritimus
ENSCSAVG00000005685	-	89	65.563	ENSVVUG00000007486	RBM8A	89	64.516	Vulpes_vulpes
ENSCSAVG00000005685	-	93	64.557	ENSXCOG00000004369	rbm8a	89	65.161	Xiphophorus_couchianus
ENSCSAVG00000005685	-	95	64.557	ENSXMAG00000013463	rbm8a	97	65.359	Xiphophorus_maculatus