EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005704 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1857 bases
Position: chrreftig_7:1902244-1904100
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009720	DNA_pol_A_exo1	PF01612.20	2.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009838	-	1497	-	ENSCSAVP00000009720	499 (aa)	-	H2YWK9

Gene Model

Click here to download ENSCSAVG00000005704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005704's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005704	-	93	42.188	ENSG00000187609	EXD3	53	41.406	Homo_sapiens
ENSCSAVG00000005704	-	93	38.636	ENSAPOG00000015520	exd3	56	38.462	Acanthochromis_polyacanthus
ENSCSAVG00000005704	-	93	38.903	ENSACIG00000005561	exd3	52	38.903	Amphilophus_citrinellus
ENSCSAVG00000005704	-	93	37.406	ENSAOCG00000007721	exd3	53	37.500	Amphiprion_ocellaris
ENSCSAVG00000005704	-	93	37.656	ENSAPEG00000007019	exd3	54	37.745	Amphiprion_percula
ENSCSAVG00000005704	-	92	40.576	ENSAPLG00000015358	EXD3	65	40.314	Anas_platyrhynchos
ENSCSAVG00000005704	-	69	35.598	ENSACAG00000014448	-	85	36.000	Anolis_carolinensis
ENSCSAVG00000005704	-	93	41.161	ENSANAG00000019674	EXD3	53	40.000	Aotus_nancymaae
ENSCSAVG00000005704	-	93	38.889	ENSAMXG00000019494	exd3	54	39.164	Astyanax_mexicanus
ENSCSAVG00000005704	-	97	38.259	ENSBTAG00000023788	EXD3	58	37.760	Bos_taurus
ENSCSAVG00000005704	-	98	40.789	ENSCJAG00000013170	EXD3	59	39.633	Callithrix_jacchus
ENSCSAVG00000005704	-	97	37.666	ENSCAFG00000019444	EXD3	56	37.666	Canis_familiaris
ENSCSAVG00000005704	-	97	37.135	ENSCAFG00020003171	EXD3	55	36.649	Canis_lupus_dingo
ENSCSAVG00000005704	-	93	40.897	ENSCCAG00000027996	EXD3	52	40.584	Cebus_capucinus
ENSCSAVG00000005704	-	93	40.000	ENSCSAG00000016661	EXD3	53	40.104	Chlorocebus_sabaeus
ENSCSAVG00000005704	-	76	38.931	ENSCPBG00000011686	EXD3	59	38.931	Chrysemys_picta_bellii
ENSCSAVG00000005704	-	99	70.339	ENSCING00000002195	-	60	70.339	Ciona_intestinalis
ENSCSAVG00000005704	-	93	40.000	ENSCANG00000040692	EXD3	53	41.161	Colobus_angolensis_palliatus
ENSCSAVG00000005704	-	93	37.984	ENSCSEG00000000750	exd3	60	38.442	Cynoglossus_semilaevis
ENSCSAVG00000005704	-	97	39.842	ENSEASG00005016023	EXD3	56	39.628	Equus_asinus_asinus
ENSCSAVG00000005704	-	97	40.000	ENSECAG00000017546	EXD3	55	39.362	Equus_caballus
ENSCSAVG00000005704	-	75	38.845	ENSEEUG00000000405	-	54	37.897	Erinaceus_europaeus
ENSCSAVG00000005704	-	97	40.633	ENSFCAG00000003579	EXD3	56	39.842	Felis_catus
ENSCSAVG00000005704	-	93	40.967	ENSFALG00000005132	EXD3	58	40.921	Ficedula_albicollis
ENSCSAVG00000005704	-	99	41.310	ENSGALG00000052646	EXD3	61	40.204	Gallus_gallus
ENSCSAVG00000005704	-	92	37.931	ENSGACG00000017442	exd3	63	37.931	Gasterosteus_aculeatus
ENSCSAVG00000005704	-	76	39.646	ENSGAGG00000011888	EXD3	65	39.646	Gopherus_agassizii
ENSCSAVG00000005704	-	97	38.889	ENSIPUG00000020343	exd3	57	39.031	Ictalurus_punctatus
ENSCSAVG00000005704	-	55	53.731	ENSLACG00000009425	-	74	53.731	Latimeria_chalumnae
ENSCSAVG00000005704	-	100	37.391	ENSLAFG00000001122	EXD3	76	37.021	Loxodonta_africana
ENSCSAVG00000005704	-	93	40.513	ENSMFAG00000037569	EXD3	53	39.646	Macaca_fascicularis
ENSCSAVG00000005704	-	93	45.312	ENSMNEG00000033487	EXD3	52	45.312	Macaca_nemestrina
ENSCSAVG00000005704	-	99	40.409	ENSMLEG00000040548	EXD3	59	39.547	Mandrillus_leucophaeus
ENSCSAVG00000005704	-	92	39.221	ENSMGAG00000001267	EXD3	69	38.961	Meleagris_gallopavo
ENSCSAVG00000005704	-	75	41.221	ENSMODG00000028091	-	72	40.967	Monodelphis_domestica
ENSCSAVG00000005704	-	100	34.934	ENSMPUG00000015130	EXD3	53	37.500	Mustela_putorius_furo
ENSCSAVG00000005704	-	98	41.645	ENSNLEG00000009095	-	65	40.759	Nomascus_leucogenys
ENSCSAVG00000005704	-	75	38.817	ENSONIG00000003880	exd3	51	37.975	Oreochromis_niloticus
ENSCSAVG00000005704	-	99	33.475	ENSOANG00000012485	-	74	33.120	Ornithorhynchus_anatinus
ENSCSAVG00000005704	-	93	40.306	ENSPPAG00000042435	EXD3	53	40.933	Pan_paniscus
ENSCSAVG00000005704	-	97	39.323	ENSPPRG00000004634	EXD3	56	39.211	Panthera_pardus
ENSCSAVG00000005704	-	93	39.426	ENSPANG00000026338	EXD3	52	39.108	Papio_anubis
ENSCSAVG00000005704	-	98	37.056	ENSPKIG00000021103	exd3	58	37.056	Paramormyrops_kingsleyae
ENSCSAVG00000005704	-	92	41.176	ENSPSIG00000007745	EXD3	55	41.176	Pelodiscus_sinensis
ENSCSAVG00000005704	-	85	34.365	ENSPMAG00000006135	-	75	33.125	Petromyzon_marinus
ENSCSAVG00000005704	-	100	37.945	ENSPCIG00000006180	-	69	37.632	Phascolarctos_cinereus
ENSCSAVG00000005704	-	93	38.961	ENSPNAG00000016753	exd3	54	38.961	Pygocentrus_nattereri
ENSCSAVG00000005704	-	93	41.689	ENSRBIG00000031855	EXD3	53	41.689	Rhinopithecus_bieti
ENSCSAVG00000005704	-	93	41.425	ENSRROG00000040120	EXD3	53	41.425	Rhinopithecus_roxellana
ENSCSAVG00000005704	-	94	39.691	ENSSBOG00000022389	EXD3	58	38.560	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005704	-	88	38.065	ENSSHAG00000001276	-	61	37.634	Sarcophilus_harrisii
ENSCSAVG00000005704	-	97	38.083	ENSSFOG00015023063	exd3	57	38.083	Scleropages_formosus
ENSCSAVG00000005704	-	93	37.186	ENSSLDG00000004671	exd3	58	37.186	Seriola_lalandi_dorsalis
ENSCSAVG00000005704	-	97	38.120	ENSSSCG00000005855	EXD3	59	37.275	Sus_scrofa
ENSCSAVG00000005704	-	94	40.568	ENSTGUG00000002494	EXD3	53	40.568	Taeniopygia_guttata
ENSCSAVG00000005704	-	97	37.203	ENSUAMG00000021470	EXD3	60	36.675	Ursus_americanus
ENSCSAVG00000005704	-	97	38.462	ENSVVUG00000029403	EXD3	55	38.462	Vulpes_vulpes