EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005708 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3621 bases
Position: chrreftig_148:342551-346171
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009726	Ribosomal_L2_C	PF03947.18	1.6e-26	1	1
ENSCSAVP00000009726	Ribosomal_L2	PF00181.23	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009844	-	974	-	ENSCSAVP00000009726	320 (aa)	-	H2YWL5

Gene Model

Click here to download ENSCSAVG00000005708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005708	-	72	40.175	ENSG00000112651	MRPL2	71	40.175	Homo_sapiens
ENSCSAVG00000005708	-	90	35.495	ENSAPOG00000011699	mrpl2	93	35.495	Acanthochromis_polyacanthus
ENSCSAVG00000005708	-	79	37.255	ENSACIG00000005647	mrpl2	72	37.255	Amphilophus_citrinellus
ENSCSAVG00000005708	-	57	31.522	ENSACIG00000012738	-	78	31.522	Amphilophus_citrinellus
ENSCSAVG00000005708	-	91	35.714	ENSAOCG00000008701	mrpl2	95	35.714	Amphiprion_ocellaris
ENSCSAVG00000005708	-	91	35.714	ENSAPEG00000024377	mrpl2	95	35.714	Amphiprion_percula
ENSCSAVG00000005708	-	90	33.562	ENSATEG00000014293	mrpl2	93	33.562	Anabas_testudineus
ENSCSAVG00000005708	-	73	39.149	ENSACAG00000005134	MRPL2	93	34.483	Anolis_carolinensis
ENSCSAVG00000005708	-	72	40.175	ENSANAG00000037029	MRPL2	71	40.175	Aotus_nancymaae
ENSCSAVG00000005708	-	79	36.471	ENSACLG00000022701	mrpl2	80	36.471	Astatotilapia_calliptera
ENSCSAVG00000005708	-	73	39.149	ENSAMXG00000021532	mrpl2	73	39.149	Astyanax_mexicanus
ENSCSAVG00000005708	-	81	36.680	ENSBTAG00000012752	MRPL2	80	36.680	Bos_taurus
ENSCSAVG00000005708	-	76	37.551	WBGene00018932	mrpl-2	73	37.551	Caenorhabditis_elegans
ENSCSAVG00000005708	-	85	37.363	ENSCJAG00000005116	MRPL2	83	37.363	Callithrix_jacchus
ENSCSAVG00000005708	-	72	37.991	ENSCAFG00000001782	MRPL2	71	37.991	Canis_familiaris
ENSCSAVG00000005708	-	72	37.991	ENSCAFG00020011096	MRPL2	71	37.991	Canis_lupus_dingo
ENSCSAVG00000005708	-	72	39.301	ENSCHIG00000017416	MRPL2	71	39.301	Capra_hircus
ENSCSAVG00000005708	-	88	35.231	ENSTSYG00000005752	MRPL2	85	35.231	Carlito_syrichta
ENSCSAVG00000005708	-	72	37.555	ENSCAPG00000013055	MRPL2	84	37.555	Cavia_aperea
ENSCSAVG00000005708	-	72	37.555	ENSCPOG00000024326	MRPL2	71	37.555	Cavia_porcellus
ENSCSAVG00000005708	-	72	39.301	ENSCCAG00000037139	MRPL2	71	39.301	Cebus_capucinus
ENSCSAVG00000005708	-	85	36.630	ENSCATG00000030671	MRPL2	92	34.899	Cercocebus_atys
ENSCSAVG00000005708	-	72	37.991	ENSCLAG00000011117	MRPL2	71	37.991	Chinchilla_lanigera
ENSCSAVG00000005708	-	72	39.301	ENSCSAG00000011591	MRPL2	71	39.301	Chlorocebus_sabaeus
ENSCSAVG00000005708	-	56	41.667	ENSCHOG00000002924	MRPL2	58	41.667	Choloepus_hoffmanni
ENSCSAVG00000005708	-	72	41.048	ENSCPBG00000003392	MRPL2	76	41.048	Chrysemys_picta_bellii
ENSCSAVG00000005708	-	60	66.837	ENSCING00000004858	-	88	66.837	Ciona_intestinalis
ENSCSAVG00000005708	-	73	37.607	ENSCANG00000037202	MRPL2	89	37.607	Colobus_angolensis_palliatus
ENSCSAVG00000005708	-	90	34.680	ENSCGRG00001022895	Mrpl2	92	34.680	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005708	-	90	34.680	ENSCGRG00000004997	Mrpl2	92	34.680	Cricetulus_griseus_crigri
ENSCSAVG00000005708	-	91	34.007	ENSCSEG00000014925	mrpl2	94	34.007	Cynoglossus_semilaevis
ENSCSAVG00000005708	-	79	36.078	ENSCVAG00000011173	mrpl2	80	36.078	Cyprinodon_variegatus
ENSCSAVG00000005708	-	73	40.000	ENSDARG00000062568	mrpl2	76	40.000	Danio_rerio
ENSCSAVG00000005708	-	72	39.301	ENSDNOG00000009763	MRPL2	71	39.301	Dasypus_novemcinctus
ENSCSAVG00000005708	-	71	39.912	ENSDORG00000012189	Mrpl2	71	39.912	Dipodomys_ordii
ENSCSAVG00000005708	-	89	34.266	FBgn0036135	mRpL2	91	34.266	Drosophila_melanogaster
ENSCSAVG00000005708	-	66	38.863	ENSETEG00000013179	MRPL2	58	38.863	Echinops_telfairi
ENSCSAVG00000005708	-	71	39.035	ENSEBUG00000000650	mrpl2	67	39.035	Eptatretus_burgeri
ENSCSAVG00000005708	-	72	38.865	ENSEASG00005003182	MRPL2	71	38.865	Equus_asinus_asinus
ENSCSAVG00000005708	-	72	38.865	ENSECAG00000020273	MRPL2	71	38.865	Equus_caballus
ENSCSAVG00000005708	-	72	37.118	ENSFCAG00000028089	MRPL2	71	37.555	Felis_catus
ENSCSAVG00000005708	-	73	41.277	ENSFALG00000000843	MRPL2	87	41.277	Ficedula_albicollis
ENSCSAVG00000005708	-	72	39.301	ENSFDAG00000008295	MRPL2	71	39.301	Fukomys_damarensis
ENSCSAVG00000005708	-	63	37.811	ENSFHEG00000002031	mrpl2	72	37.811	Fundulus_heteroclitus
ENSCSAVG00000005708	-	73	38.034	ENSGMOG00000018345	mrpl2	80	38.034	Gadus_morhua
ENSCSAVG00000005708	-	72	42.795	ENSGALG00000008597	MRPL2	72	41.921	Gallus_gallus
ENSCSAVG00000005708	-	79	34.118	ENSGAFG00000004499	mrpl2	80	34.118	Gambusia_affinis
ENSCSAVG00000005708	-	91	33.333	ENSGACG00000004104	mrpl2	94	33.333	Gasterosteus_aculeatus
ENSCSAVG00000005708	-	72	40.611	ENSGAGG00000018941	MRPL2	73	40.611	Gopherus_agassizii
ENSCSAVG00000005708	-	72	39.738	ENSGGOG00000010552	MRPL2	71	39.738	Gorilla_gorilla
ENSCSAVG00000005708	-	79	36.471	ENSHBUG00000009832	mrpl2	80	36.471	Haplochromis_burtoni
ENSCSAVG00000005708	-	72	39.738	ENSHGLG00000019180	MRPL2	72	39.738	Heterocephalus_glaber_female
ENSCSAVG00000005708	-	72	39.738	ENSHGLG00100014403	MRPL2	72	39.738	Heterocephalus_glaber_male
ENSCSAVG00000005708	-	73	38.362	ENSHCOG00000020797	mrpl2	73	38.362	Hippocampus_comes
ENSCSAVG00000005708	-	73	40.254	ENSIPUG00000002348	mrpl2	75	40.254	Ictalurus_punctatus
ENSCSAVG00000005708	-	88	34.520	ENSSTOG00000023948	MRPL2	85	34.520	Ictidomys_tridecemlineatus
ENSCSAVG00000005708	-	74	38.655	ENSJJAG00000009715	Mrpl2	74	38.655	Jaculus_jaculus
ENSCSAVG00000005708	-	79	38.039	ENSKMAG00000010073	mrpl2	80	38.039	Kryptolebias_marmoratus
ENSCSAVG00000005708	-	90	33.333	ENSLBEG00000014102	mrpl2	93	33.333	Labrus_bergylta
ENSCSAVG00000005708	-	73	37.179	ENSLACG00000015398	MRPL2	77	37.179	Latimeria_chalumnae
ENSCSAVG00000005708	-	73	37.021	ENSLOCG00000015874	mrpl2	75	37.021	Lepisosteus_oculatus
ENSCSAVG00000005708	-	78	32.812	ENSLAFG00000017251	MRPL2	100	32.812	Loxodonta_africana
ENSCSAVG00000005708	-	90	35.235	ENSMFAG00000037938	MRPL2	92	35.235	Macaca_fascicularis
ENSCSAVG00000005708	-	90	35.235	ENSMMUG00000002450	MRPL2	92	35.235	Macaca_mulatta
ENSCSAVG00000005708	-	90	35.235	ENSMNEG00000029931	MRPL2	92	35.235	Macaca_nemestrina
ENSCSAVG00000005708	-	85	36.996	ENSMLEG00000044312	MRPL2	92	35.235	Mandrillus_leucophaeus
ENSCSAVG00000005708	-	90	32.877	ENSMAMG00000016610	mrpl2	93	32.877	Mastacembelus_armatus
ENSCSAVG00000005708	-	79	36.471	ENSMZEG00005010319	mrpl2	80	36.471	Maylandia_zebra
ENSCSAVG00000005708	-	63	45.274	ENSMGAG00000003797	MRPL2	92	45.274	Meleagris_gallopavo
ENSCSAVG00000005708	-	72	39.738	ENSMAUG00000008326	Mrpl2	72	39.738	Mesocricetus_auratus
ENSCSAVG00000005708	-	91	34.333	ENSMICG00000008282	MRPL2	93	34.333	Microcebus_murinus
ENSCSAVG00000005708	-	90	35.254	ENSMOCG00000002525	Mrpl2	92	35.254	Microtus_ochrogaster
ENSCSAVG00000005708	-	65	38.278	ENSMMOG00000008737	mrpl2	73	38.278	Mola_mola
ENSCSAVG00000005708	-	78	37.358	ENSMODG00000018989	MRPL2	78	37.358	Monodelphis_domestica
ENSCSAVG00000005708	-	90	33.562	ENSMALG00000006129	mrpl2	88	33.562	Monopterus_albus
ENSCSAVG00000005708	-	90	34.354	MGP_CAROLIEiJ_G0021678	Mrpl2	92	34.354	Mus_caroli
ENSCSAVG00000005708	-	90	34.122	ENSMUSG00000002767	Mrpl2	92	34.122	Mus_musculus
ENSCSAVG00000005708	-	90	34.237	MGP_PahariEiJ_G0020669	Mrpl2	92	34.237	Mus_pahari
ENSCSAVG00000005708	-	90	34.122	MGP_SPRETEiJ_G0022590	Mrpl2	92	34.122	Mus_spretus
ENSCSAVG00000005708	-	81	37.066	ENSMLUG00000012198	MRPL2	80	37.066	Myotis_lucifugus
ENSCSAVG00000005708	-	72	38.865	ENSNGAG00000015802	Mrpl2	71	38.865	Nannospalax_galili
ENSCSAVG00000005708	-	79	36.471	ENSNBRG00000015282	mrpl2	80	36.471	Neolamprologus_brichardi
ENSCSAVG00000005708	-	72	40.175	ENSNLEG00000004370	MRPL2	92	35.906	Nomascus_leucogenys
ENSCSAVG00000005708	-	68	31.818	ENSNLEG00000028489	-	65	31.818	Nomascus_leucogenys
ENSCSAVG00000005708	-	78	36.905	ENSMEUG00000007208	MRPL2	77	36.905	Notamacropus_eugenii
ENSCSAVG00000005708	-	52	40.120	ENSOPRG00000002347	MRPL2	54	40.120	Ochotona_princeps
ENSCSAVG00000005708	-	72	37.555	ENSODEG00000015619	MRPL2	71	37.555	Octodon_degus
ENSCSAVG00000005708	-	79	36.471	ENSONIG00000010147	mrpl2	80	36.471	Oreochromis_niloticus
ENSCSAVG00000005708	-	72	38.865	ENSOANG00000008451	MRPL2	83	36.576	Ornithorhynchus_anatinus
ENSCSAVG00000005708	-	72	40.175	ENSOCUG00000001586	MRPL2	71	40.175	Oryctolagus_cuniculus
ENSCSAVG00000005708	-	79	36.471	ENSORLG00000012882	mrpl2	80	36.471	Oryzias_latipes
ENSCSAVG00000005708	-	79	36.471	ENSORLG00020006747	mrpl2	80	36.471	Oryzias_latipes_hni
ENSCSAVG00000005708	-	79	36.471	ENSORLG00015022138	mrpl2	82	36.471	Oryzias_latipes_hsok
ENSCSAVG00000005708	-	91	34.228	ENSOMEG00000018515	mrpl2	94	34.228	Oryzias_melastigma
ENSCSAVG00000005708	-	72	38.865	ENSOGAG00000034421	MRPL2	72	38.865	Otolemur_garnettii
ENSCSAVG00000005708	-	90	34.899	ENSOARG00000005388	MRPL2	92	34.899	Ovis_aries
ENSCSAVG00000005708	-	72	40.175	ENSPPAG00000036609	MRPL2	71	40.175	Pan_paniscus
ENSCSAVG00000005708	-	72	37.555	ENSPPRG00000012024	MRPL2	71	37.991	Panthera_pardus
ENSCSAVG00000005708	-	72	37.555	ENSPTIG00000019266	MRPL2	71	37.991	Panthera_tigris_altaica
ENSCSAVG00000005708	-	72	40.175	ENSPTRG00000018186	MRPL2	71	40.175	Pan_troglodytes
ENSCSAVG00000005708	-	72	39.738	ENSPANG00000022610	MRPL2	83	36.996	Papio_anubis
ENSCSAVG00000005708	-	73	36.596	ENSPKIG00000023043	mrpl2	71	36.596	Paramormyrops_kingsleyae
ENSCSAVG00000005708	-	73	35.745	ENSPSIG00000004130	MRPL2	74	35.745	Pelodiscus_sinensis
ENSCSAVG00000005708	-	72	37.118	ENSPMGG00000012407	mrpl2	68	37.118	Periophthalmus_magnuspinnatus
ENSCSAVG00000005708	-	90	35.254	ENSPEMG00000009477	-	92	35.254	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005708	-	80	37.262	ENSPMAG00000001305	mrpl2	93	34.098	Petromyzon_marinus
ENSCSAVG00000005708	-	72	39.738	ENSPCIG00000028198	MRPL2	90	35.430	Phascolarctos_cinereus
ENSCSAVG00000005708	-	79	34.252	ENSPFOG00000019278	mrpl2	80	34.252	Poecilia_formosa
ENSCSAVG00000005708	-	79	34.252	ENSPLAG00000006739	mrpl2	80	34.252	Poecilia_latipinna
ENSCSAVG00000005708	-	79	34.252	ENSPMEG00000015160	mrpl2	80	34.252	Poecilia_mexicana
ENSCSAVG00000005708	-	79	34.646	ENSPREG00000008625	mrpl2	80	34.646	Poecilia_reticulata
ENSCSAVG00000005708	-	72	40.175	ENSPPYG00000016630	-	92	35.570	Pongo_abelii
ENSCSAVG00000005708	-	74	39.496	ENSPCAG00000004478	MRPL2	74	39.496	Procavia_capensis
ENSCSAVG00000005708	-	72	37.991	ENSPCOG00000016309	MRPL2	71	37.991	Propithecus_coquereli
ENSCSAVG00000005708	-	60	39.583	ENSPVAG00000008722	MRPL2	63	39.583	Pteropus_vampyrus
ENSCSAVG00000005708	-	79	36.471	ENSPNYG00000024025	MRPL2	80	36.471	Pundamilia_nyererei
ENSCSAVG00000005708	-	73	38.298	ENSPNAG00000021714	mrpl2	73	38.298	Pygocentrus_nattereri
ENSCSAVG00000005708	-	90	34.122	ENSRNOG00000018057	Mrpl2	92	34.122	Rattus_norvegicus
ENSCSAVG00000005708	-	72	39.738	ENSRBIG00000041571	MRPL2	71	39.738	Rhinopithecus_bieti
ENSCSAVG00000005708	-	72	39.738	ENSRROG00000032437	MRPL2	71	39.738	Rhinopithecus_roxellana
ENSCSAVG00000005708	-	72	40.175	ENSSBOG00000034838	MRPL2	71	40.175	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005708	-	78	38.645	ENSSHAG00000012091	MRPL2	75	38.645	Sarcophilus_harrisii
ENSCSAVG00000005708	-	73	37.021	ENSSFOG00015007767	mrpl2	74	37.021	Scleropages_formosus
ENSCSAVG00000005708	-	73	37.131	ENSSMAG00000011157	mrpl2	76	37.131	Scophthalmus_maximus
ENSCSAVG00000005708	-	73	37.021	ENSSDUG00000003727	mrpl2	75	37.021	Seriola_dumerili
ENSCSAVG00000005708	-	90	32.877	ENSSLDG00000024287	mrpl2	93	32.877	Seriola_lalandi_dorsalis
ENSCSAVG00000005708	-	88	36.170	ENSSPUG00000000371	MRPL2	87	36.170	Sphenodon_punctatus
ENSCSAVG00000005708	-	79	35.827	ENSSPAG00000006584	mrpl2	80	35.827	Stegastes_partitus
ENSCSAVG00000005708	-	72	37.555	ENSSSCG00000001658	MRPL2	71	37.555	Sus_scrofa
ENSCSAVG00000005708	-	73	41.702	ENSTGUG00000004831	MRPL2	91	41.379	Taeniopygia_guttata
ENSCSAVG00000005708	-	85	33.942	ENSTRUG00000000908	mrpl2	88	33.942	Takifugu_rubripes
ENSCSAVG00000005708	-	90	35.294	ENSTNIG00000013424	mrpl2	92	35.294	Tetraodon_nigroviridis
ENSCSAVG00000005708	-	63	38.308	ENSTBEG00000012908	MRPL2	60	38.308	Tupaia_belangeri
ENSCSAVG00000005708	-	60	39.062	ENSTTRG00000007008	MRPL2	72	39.062	Tursiops_truncatus
ENSCSAVG00000005708	-	72	37.118	ENSUAMG00000015848	MRPL2	71	37.555	Ursus_americanus
ENSCSAVG00000005708	-	72	37.555	ENSUMAG00000008717	MRPL2	71	37.991	Ursus_maritimus
ENSCSAVG00000005708	-	72	37.991	ENSVVUG00000028143	MRPL2	71	37.991	Vulpes_vulpes
ENSCSAVG00000005708	-	65	39.234	ENSXCOG00000006806	mrpl2	88	39.234	Xiphophorus_couchianus
ENSCSAVG00000005708	-	79	36.471	ENSXMAG00000006879	mrpl2	80	36.471	Xiphophorus_maculatus