EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005731 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7131 bases
Position: chrreftig_86:166863-173993
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009768	SUI1	PF01253.22	5.1e-18	1	1
ENSCSAVP00000009767	SUI1	PF01253.22	7.1e-18	1	1
ENSCSAVP00000009766	SUI1	PF01253.22	7.3e-18	1	1
ENSCSAVP00000009767	PUA	PF01472.20	8.9e-11	1	1
ENSCSAVP00000009766	PUA	PF01472.20	9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009886	-	1168	-	ENSCSAVP00000009768	330 (aa)	-	H2YWQ7
ENSCSAVT00000009885	-	1809	-	ENSCSAVP00000009767	599 (aa)	-	H2YWQ6
ENSCSAVT00000009884	-	1817	-	ENSCSAVP00000009766	601 (aa)	-	H2YWQ5

Gene Model

Click here to download ENSCSAVG00000005731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005731	-	100	38.024	ENSG00000143486	EIF2D	100	39.640	Homo_sapiens
ENSCSAVG00000005731	-	100	39.104	ENSAPOG00000003524	eif2d	100	36.613	Acanthochromis_polyacanthus
ENSCSAVG00000005731	-	99	38.138	ENSAMEG00000011880	EIF2D	100	37.686	Ailuropoda_melanoleuca
ENSCSAVG00000005731	-	100	37.910	ENSACIG00000021785	eif2d	99	39.779	Amphilophus_citrinellus
ENSCSAVG00000005731	-	100	38.806	ENSAOCG00000017584	eif2d	96	41.341	Amphiprion_ocellaris
ENSCSAVG00000005731	-	100	38.806	ENSAPEG00000011347	eif2d	100	35.610	Amphiprion_percula
ENSCSAVG00000005731	-	100	38.209	ENSATEG00000007580	eif2d	100	36.058	Anabas_testudineus
ENSCSAVG00000005731	-	100	36.826	ENSAPLG00000014849	EIF2D	100	36.471	Anas_platyrhynchos
ENSCSAVG00000005731	-	100	35.629	ENSACAG00000007724	EIF2D	100	35.313	Anolis_carolinensis
ENSCSAVG00000005731	-	100	39.820	ENSANAG00000022240	EIF2D	100	40.090	Aotus_nancymaae
ENSCSAVG00000005731	-	100	39.403	ENSACLG00000024604	eif2d	100	36.542	Astatotilapia_calliptera
ENSCSAVG00000005731	-	97	36.615	ENSAMXG00000038035	eif2d	100	36.007	Astyanax_mexicanus
ENSCSAVG00000005731	-	100	37.425	ENSBTAG00000010432	EIF2D	82	36.842	Bos_taurus
ENSCSAVG00000005731	-	99	32.024	WBGene00016113	eif-2D	99	31.527	Caenorhabditis_elegans
ENSCSAVG00000005731	-	100	37.725	ENSCJAG00000018600	EIF2D	100	40.090	Callithrix_jacchus
ENSCSAVG00000005731	-	98	36.120	ENSCAFG00000010261	EIF2D	100	36.409	Canis_familiaris
ENSCSAVG00000005731	-	98	35.607	ENSCAFG00020004757	EIF2D	100	36.020	Canis_lupus_dingo
ENSCSAVG00000005731	-	100	37.425	ENSCHIG00000009380	EIF2D	100	36.589	Capra_hircus
ENSCSAVG00000005731	-	100	38.487	ENSTSYG00000007829	EIF2D	100	40.090	Carlito_syrichta
ENSCSAVG00000005731	-	99	36.446	ENSCPOG00000008935	EIF2D	100	35.216	Cavia_porcellus
ENSCSAVG00000005731	-	100	38.323	ENSCCAG00000026977	EIF2D	100	40.090	Cebus_capucinus
ENSCSAVG00000005731	-	100	38.623	ENSCATG00000030190	EIF2D	100	39.189	Cercocebus_atys
ENSCSAVG00000005731	-	100	35.629	ENSCLAG00000014401	EIF2D	100	35.099	Chinchilla_lanigera
ENSCSAVG00000005731	-	100	38.323	ENSCSAG00000014939	EIF2D	100	37.397	Chlorocebus_sabaeus
ENSCSAVG00000005731	-	100	39.521	ENSCHOG00000007330	EIF2D	100	33.775	Choloepus_hoffmanni
ENSCSAVG00000005731	-	99	37.838	ENSCPBG00000001908	EIF2D	100	36.851	Chrysemys_picta_bellii
ENSCSAVG00000005731	-	100	77.341	ENSCING00000000226	-	100	66.830	Ciona_intestinalis
ENSCSAVG00000005731	-	100	38.323	ENSCANG00000033926	EIF2D	100	35.091	Colobus_angolensis_palliatus
ENSCSAVG00000005731	-	99	36.860	ENSCGRG00001019105	Eif2d	100	36.860	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005731	-	99	36.860	ENSCGRG00000014164	Eif2d	100	36.860	Cricetulus_griseus_crigri
ENSCSAVG00000005731	-	99	34.911	ENSCSEG00000021328	eif2d	100	34.839	Cynoglossus_semilaevis
ENSCSAVG00000005731	-	100	39.701	ENSCVAG00000016064	eif2d	100	37.622	Cyprinodon_variegatus
ENSCSAVG00000005731	-	100	39.941	ENSDARG00000012929	eif2d	100	38.259	Danio_rerio
ENSCSAVG00000005731	-	100	37.425	ENSDNOG00000009251	-	100	34.566	Dasypus_novemcinctus
ENSCSAVG00000005731	-	100	36.842	ENSDORG00000012925	Eif2d	100	36.842	Dipodomys_ordii
ENSCSAVG00000005731	-	99	30.449	FBgn0041588	eIF2D	99	30.378	Drosophila_melanogaster
ENSCSAVG00000005731	-	100	39.222	ENSETEG00000015298	EIF2D	100	36.989	Echinops_telfairi
ENSCSAVG00000005731	-	99	31.731	ENSEBUG00000011079	eif2d	99	31.833	Eptatretus_burgeri
ENSCSAVG00000005731	-	100	38.024	ENSEASG00005004921	EIF2D	100	37.624	Equus_asinus_asinus
ENSCSAVG00000005731	-	100	37.725	ENSECAG00000000127	EIF2D	80	37.624	Equus_caballus
ENSCSAVG00000005731	-	100	38.166	ENSELUG00000001790	eif2d	100	36.066	Esox_lucius
ENSCSAVG00000005731	-	100	37.725	ENSFCAG00000013786	-	100	38.062	Felis_catus
ENSCSAVG00000005731	-	99	35.430	ENSFDAG00000011373	EIF2D	100	35.430	Fukomys_damarensis
ENSCSAVG00000005731	-	100	37.168	ENSFHEG00000003474	eif2d	100	37.134	Fundulus_heteroclitus
ENSCSAVG00000005731	-	99	39.640	ENSGMOG00000016667	eif2d	100	37.686	Gadus_morhua
ENSCSAVG00000005731	-	100	37.425	ENSGALG00000000856	EIF2D	100	36.834	Gallus_gallus
ENSCSAVG00000005731	-	100	39.104	ENSGAFG00000021062	eif2d	100	36.731	Gambusia_affinis
ENSCSAVG00000005731	-	99	39.701	ENSGACG00000002815	eif2d	100	35.771	Gasterosteus_aculeatus
ENSCSAVG00000005731	-	99	37.789	ENSGAGG00000010058	EIF2D	99	37.789	Gopherus_agassizii
ENSCSAVG00000005731	-	100	38.623	ENSGGOG00000015270	EIF2D	100	39.640	Gorilla_gorilla
ENSCSAVG00000005731	-	100	39.403	ENSHBUG00000006298	eif2d	100	36.705	Haplochromis_burtoni
ENSCSAVG00000005731	-	98	37.082	ENSHGLG00000008498	EIF2D	99	36.227	Heterocephalus_glaber_female
ENSCSAVG00000005731	-	99	35.762	ENSHGLG00100006825	EIF2D	99	35.762	Heterocephalus_glaber_male
ENSCSAVG00000005731	-	100	37.015	ENSHCOG00000009140	eif2d	95	43.275	Hippocampus_comes
ENSCSAVG00000005731	-	100	40.476	ENSIPUG00000012330	eif2d	100	37.684	Ictalurus_punctatus
ENSCSAVG00000005731	-	100	38.323	ENSSTOG00000006329	EIF2D	100	38.221	Ictidomys_tridecemlineatus
ENSCSAVG00000005731	-	100	37.612	ENSKMAG00000016689	eif2d	100	36.230	Kryptolebias_marmoratus
ENSCSAVG00000005731	-	100	37.612	ENSLBEG00000009691	eif2d	100	35.645	Labrus_bergylta
ENSCSAVG00000005731	-	100	37.725	ENSLACG00000008651	EIF2D	100	37.007	Latimeria_chalumnae
ENSCSAVG00000005731	-	99	40.533	ENSLOCG00000012230	eif2d	100	37.520	Lepisosteus_oculatus
ENSCSAVG00000005731	-	100	38.024	ENSLAFG00000000517	EIF2D	100	37.171	Loxodonta_africana
ENSCSAVG00000005731	-	100	38.323	ENSMFAG00000033925	EIF2D	100	39.189	Macaca_fascicularis
ENSCSAVG00000005731	-	100	38.323	ENSMMUG00000002528	EIF2D	100	39.189	Macaca_mulatta
ENSCSAVG00000005731	-	100	38.323	ENSMNEG00000028643	EIF2D	100	38.739	Macaca_nemestrina
ENSCSAVG00000005731	-	100	38.024	ENSMLEG00000030616	EIF2D	100	39.189	Mandrillus_leucophaeus
ENSCSAVG00000005731	-	100	37.101	ENSMAMG00000012055	eif2d	100	35.229	Mastacembelus_armatus
ENSCSAVG00000005731	-	100	39.403	ENSMZEG00005023738	eif2d	100	36.542	Maylandia_zebra
ENSCSAVG00000005731	-	100	37.425	ENSMGAG00000003648	EIF2D	100	36.765	Meleagris_gallopavo
ENSCSAVG00000005731	-	99	37.651	ENSMAUG00000008390	Eif2d	100	37.313	Mesocricetus_auratus
ENSCSAVG00000005731	-	100	38.323	ENSMICG00000017696	EIF2D	100	39.640	Microcebus_murinus
ENSCSAVG00000005731	-	99	37.086	ENSMOCG00000015872	Eif2d	100	37.086	Microtus_ochrogaster
ENSCSAVG00000005731	-	100	38.095	ENSMMOG00000020867	eif2d	100	36.378	Mola_mola
ENSCSAVG00000005731	-	99	36.036	ENSMODG00000002070	EIF2D	98	34.556	Monodelphis_domestica
ENSCSAVG00000005731	-	100	38.209	ENSMALG00000020271	eif2d	100	36.125	Monopterus_albus
ENSCSAVG00000005731	-	99	36.529	MGP_CAROLIEiJ_G0014568	Eif2d	100	36.529	Mus_caroli
ENSCSAVG00000005731	-	99	37.252	ENSMUSG00000026427	Eif2d	100	37.252	Mus_musculus
ENSCSAVG00000005731	-	99	37.349	MGP_PahariEiJ_G0027802	Eif2d	100	37.086	Mus_pahari
ENSCSAVG00000005731	-	99	37.086	MGP_SPRETEiJ_G0015372	Eif2d	100	37.086	Mus_spretus
ENSCSAVG00000005731	-	99	37.336	ENSMPUG00000012089	EIF2D	100	37.336	Mustela_putorius_furo
ENSCSAVG00000005731	-	100	38.221	ENSMLUG00000013479	-	100	38.221	Myotis_lucifugus
ENSCSAVG00000005731	-	100	38.221	ENSMLUG00000001410	-	100	38.221	Myotis_lucifugus
ENSCSAVG00000005731	-	100	37.725	ENSNGAG00000017892	Eif2d	100	37.459	Nannospalax_galili
ENSCSAVG00000005731	-	100	39.403	ENSNBRG00000017231	eif2d	100	36.378	Neolamprologus_brichardi
ENSCSAVG00000005731	-	100	38.623	ENSNLEG00000000648	EIF2D	100	39.640	Nomascus_leucogenys
ENSCSAVG00000005731	-	100	36.527	ENSMEUG00000008777	EIF2D	99	35.033	Notamacropus_eugenii
ENSCSAVG00000005731	-	87	40.127	ENSOPRG00000000585	EIF2D	86	40.127	Ochotona_princeps
ENSCSAVG00000005731	-	99	36.145	ENSODEG00000005533	EIF2D	100	35.762	Octodon_degus
ENSCSAVG00000005731	-	97	37.846	ENSONIG00000017293	eif2d	100	35.400	Oreochromis_niloticus
ENSCSAVG00000005731	-	100	35.329	ENSOANG00000002339	EIF2D	64	35.329	Ornithorhynchus_anatinus
ENSCSAVG00000005731	-	99	35.537	ENSOCUG00000015451	EIF2D	100	35.537	Oryctolagus_cuniculus
ENSCSAVG00000005731	-	100	37.612	ENSORLG00000010491	eif2d	100	35.342	Oryzias_latipes
ENSCSAVG00000005731	-	100	37.313	ENSORLG00020021017	eif2d	100	35.342	Oryzias_latipes_hni
ENSCSAVG00000005731	-	100	37.612	ENSORLG00015016577	eif2d	100	35.342	Oryzias_latipes_hsok
ENSCSAVG00000005731	-	100	38.209	ENSOMEG00000010533	eif2d	100	35.610	Oryzias_melastigma
ENSCSAVG00000005731	-	100	38.323	ENSOGAG00000010156	EIF2D	100	38.119	Otolemur_garnettii
ENSCSAVG00000005731	-	100	38.024	ENSOARG00000005917	EIF2D	100	36.921	Ovis_aries
ENSCSAVG00000005731	-	100	38.623	ENSPPAG00000034016	EIF2D	100	37.727	Pan_paniscus
ENSCSAVG00000005731	-	100	37.725	ENSPPRG00000010958	EIF2D	100	39.640	Panthera_pardus
ENSCSAVG00000005731	-	100	37.725	ENSPTIG00000012728	EIF2D	99	38.062	Panthera_tigris_altaica
ENSCSAVG00000005731	-	100	38.323	ENSPTRG00000001913	EIF2D	100	39.640	Pan_troglodytes
ENSCSAVG00000005731	-	100	38.323	ENSPANG00000012287	EIF2D	100	39.189	Papio_anubis
ENSCSAVG00000005731	-	100	40.597	ENSPKIG00000012100	eif2d	100	37.664	Paramormyrops_kingsleyae
ENSCSAVG00000005731	-	99	38.739	ENSPSIG00000003547	EIF2D	100	37.641	Pelodiscus_sinensis
ENSCSAVG00000005731	-	100	37.910	ENSPMGG00000011913	eif2d	100	36.184	Periophthalmus_magnuspinnatus
ENSCSAVG00000005731	-	99	37.355	ENSPEMG00000010082	Eif2d	100	37.355	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005731	-	100	36.826	ENSPCIG00000001093	EIF2D	100	35.644	Phascolarctos_cinereus
ENSCSAVG00000005731	-	99	38.855	ENSPFOG00000012940	eif2d	99	36.808	Poecilia_formosa
ENSCSAVG00000005731	-	100	39.403	ENSPLAG00000019930	eif2d	100	37.417	Poecilia_latipinna
ENSCSAVG00000005731	-	100	39.701	ENSPMEG00000007895	eif2d	100	36.758	Poecilia_mexicana
ENSCSAVG00000005731	-	100	38.507	ENSPREG00000015967	eif2d	100	36.306	Poecilia_reticulata
ENSCSAVG00000005731	-	100	38.623	ENSPPYG00000000285	EIF2D	100	37.727	Pongo_abelii
ENSCSAVG00000005731	-	90	40.650	ENSPCAG00000010685	EIF2D	89	40.650	Procavia_capensis
ENSCSAVG00000005731	-	100	39.521	ENSPCOG00000028365	EIF2D	100	39.203	Propithecus_coquereli
ENSCSAVG00000005731	-	100	38.024	ENSPVAG00000008053	EIF2D	100	38.284	Pteropus_vampyrus
ENSCSAVG00000005731	-	69	39.056	ENSPNYG00000004459	eif2d	85	40.090	Pundamilia_nyererei
ENSCSAVG00000005731	-	100	41.246	ENSPNAG00000000143	eif2d	100	38.953	Pygocentrus_nattereri
ENSCSAVG00000005731	-	99	36.921	ENSRNOG00000004910	Eif2d	100	36.921	Rattus_norvegicus
ENSCSAVG00000005731	-	100	38.024	ENSRBIG00000011644	EIF2D	100	39.189	Rhinopithecus_bieti
ENSCSAVG00000005731	-	100	38.024	ENSRROG00000034152	EIF2D	100	39.189	Rhinopithecus_roxellana
ENSCSAVG00000005731	-	100	38.922	ENSSBOG00000018387	EIF2D	100	40.090	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005731	-	99	32.670	ENSSHAG00000016470	-	99	32.504	Sarcophilus_harrisii
ENSCSAVG00000005731	-	100	35.632	ENSSHAG00000017769	-	100	35.632	Sarcophilus_harrisii
ENSCSAVG00000005731	-	100	39.823	ENSSFOG00015014988	eif2d	100	36.765	Scleropages_formosus
ENSCSAVG00000005731	-	100	39.104	ENSSMAG00000010879	eif2d	100	36.928	Scophthalmus_maximus
ENSCSAVG00000005731	-	100	40.000	ENSSDUG00000014517	eif2d	100	36.834	Seriola_dumerili
ENSCSAVG00000005731	-	100	39.403	ENSSLDG00000006671	eif2d	100	36.511	Seriola_lalandi_dorsalis
ENSCSAVG00000005731	-	100	36.527	ENSSARG00000012911	EIF2D	99	32.239	Sorex_araneus
ENSCSAVG00000005731	-	100	37.126	ENSSPUG00000008418	EIF2D	100	36.289	Sphenodon_punctatus
ENSCSAVG00000005731	-	100	37.910	ENSSPAG00000002966	eif2d	100	36.111	Stegastes_partitus
ENSCSAVG00000005731	-	99	36.667	ENSSSCG00000015648	EIF2D	96	36.667	Sus_scrofa
ENSCSAVG00000005731	-	100	35.030	ENSTGUG00000001092	EIF2D	100	35.043	Taeniopygia_guttata
ENSCSAVG00000005731	-	100	38.623	ENSTRUG00000012383	eif2d	100	37.086	Takifugu_rubripes
ENSCSAVG00000005731	-	100	39.286	ENSTNIG00000017906	eif2d	100	37.520	Tetraodon_nigroviridis
ENSCSAVG00000005731	-	65	46.667	ENSTBEG00000017584	EIF2D	66	46.667	Tupaia_belangeri
ENSCSAVG00000005731	-	81	44.271	ENSTTRG00000012099	EIF2D	100	34.488	Tursiops_truncatus
ENSCSAVG00000005731	-	99	37.538	ENSUAMG00000022745	EIF2D	99	40.107	Ursus_americanus
ENSCSAVG00000005731	-	99	37.838	ENSUMAG00000004182	EIF2D	100	34.053	Ursus_maritimus
ENSCSAVG00000005731	-	68	44.186	ENSVPAG00000007046	EIF2D	67	44.186	Vicugna_pacos
ENSCSAVG00000005731	-	98	35.284	ENSVVUG00000013525	EIF2D	100	35.585	Vulpes_vulpes
ENSCSAVG00000005731	-	99	37.110	ENSXETG00000023678	eif2d	100	37.110	Xenopus_tropicalis
ENSCSAVG00000005731	-	100	39.403	ENSXCOG00000011402	eif2d	100	37.115	Xiphophorus_couchianus
ENSCSAVG00000005731	-	98	39.818	ENSXMAG00000014696	eif2d	99	37.152	Xiphophorus_maculatus