EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005762 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 19881 bases
Position: chrreftig_51:1638408-1658288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009815	R3H	PF01424.22	7.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000009933	-	3748	-	ENSCSAVP00000009815	1111 (aa)	-	H2YWV4

Gene Model

Click here to download ENSCSAVG00000005762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005762's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005762	-	68	48.635	ENSG00000086102	NFX1	67	48.635	Homo_sapiens
ENSCSAVG00000005762	-	88	39.504	ENSAPOG00000016671	si:dkey-10f23.2	96	39.716	Acanthochromis_polyacanthus
ENSCSAVG00000005762	-	68	47.607	ENSAMEG00000007472	NFX1	68	47.607	Ailuropoda_melanoleuca
ENSCSAVG00000005762	-	76	43.610	ENSACIG00000021055	si:dkey-10f23.2	96	40.309	Amphilophus_citrinellus
ENSCSAVG00000005762	-	76	42.889	ENSAOCG00000017316	si:dkey-10f23.2	91	42.320	Amphiprion_ocellaris
ENSCSAVG00000005762	-	88	39.599	ENSAPEG00000012401	si:dkey-10f23.2	99	40.193	Amphiprion_percula
ENSCSAVG00000005762	-	69	46.976	ENSATEG00000002080	si:dkey-10f23.2	98	38.889	Anabas_testudineus
ENSCSAVG00000005762	-	78	44.928	ENSAPLG00000005524	NFX1	84	42.570	Anas_platyrhynchos
ENSCSAVG00000005762	-	69	46.835	ENSACAG00000002412	NFX1	68	47.601	Anolis_carolinensis
ENSCSAVG00000005762	-	67	47.849	ENSANAG00000001809	NFX1	67	47.849	Aotus_nancymaae
ENSCSAVG00000005762	-	81	43.146	ENSACLG00000003795	si:dkey-10f23.2	96	40.230	Astatotilapia_calliptera
ENSCSAVG00000005762	-	74	45.819	ENSAMXG00000006963	si:dkey-10f23.2	76	45.497	Astyanax_mexicanus
ENSCSAVG00000005762	-	71	46.617	ENSBTAG00000012385	NFX1	72	46.617	Bos_taurus
ENSCSAVG00000005762	-	65	40.374	WBGene00007048	nfx-1	65	41.043	Caenorhabditis_elegans
ENSCSAVG00000005762	-	67	47.979	ENSCJAG00000008142	NFX1	67	47.979	Callithrix_jacchus
ENSCSAVG00000005762	-	73	45.389	ENSCAFG00000001848	NFX1	72	46.135	Canis_familiaris
ENSCSAVG00000005762	-	71	46.363	ENSCAFG00020015630	NFX1	72	46.363	Canis_lupus_dingo
ENSCSAVG00000005762	-	71	46.486	ENSCHIG00000020037	NFX1	72	46.486	Capra_hircus
ENSCSAVG00000005762	-	67	47.843	ENSTSYG00000004125	NFX1	67	47.843	Carlito_syrichta
ENSCSAVG00000005762	-	71	41.840	ENSCAPG00000005611	NFX1	81	41.840	Cavia_aperea
ENSCSAVG00000005762	-	67	48.761	ENSCPOG00000003470	NFX1	71	46.724	Cavia_porcellus
ENSCSAVG00000005762	-	67	47.979	ENSCCAG00000025001	NFX1	67	47.979	Cebus_capucinus
ENSCSAVG00000005762	-	67	46.214	ENSCLAG00000002893	NFX1	66	46.214	Chinchilla_lanigera
ENSCSAVG00000005762	-	67	48.497	ENSCSAG00000009971	NFX1	67	48.497	Chlorocebus_sabaeus
ENSCSAVG00000005762	-	68	44.517	ENSCHOG00000009225	NFX1	69	44.517	Choloepus_hoffmanni
ENSCSAVG00000005762	-	67	47.292	ENSCPBG00000017928	NFX1	71	47.613	Chrysemys_picta_bellii
ENSCSAVG00000005762	-	99	67.527	ENSCING00000004746	nf-x-like	99	67.527	Ciona_intestinalis
ENSCSAVG00000005762	-	67	45.964	ENSCANG00000028364	NFX1	67	45.964	Colobus_angolensis_palliatus
ENSCSAVG00000005762	-	67	44.444	ENSCGRG00001002869	Nfx1	67	44.444	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005762	-	67	48.105	ENSCGRG00000016032	Nfx1	68	48.105	Cricetulus_griseus_crigri
ENSCSAVG00000005762	-	71	44.458	ENSCSEG00000019832	si:dkey-10f23.2	79	44.458	Cynoglossus_semilaevis
ENSCSAVG00000005762	-	66	48.400	ENSCVAG00000010039	si:dkey-10f23.2	96	39.443	Cyprinodon_variegatus
ENSCSAVG00000005762	-	78	43.161	ENSDARG00000105669	NFX1	81	43.161	Danio_rerio
ENSCSAVG00000005762	-	71	44.691	ENSDNOG00000002079	NFX1	71	44.691	Dasypus_novemcinctus
ENSCSAVG00000005762	-	71	43.227	ENSDORG00000001989	Nfx1	76	41.466	Dipodomys_ordii
ENSCSAVG00000005762	-	74	37.648	FBgn0001978	stc	78	36.633	Drosophila_melanogaster
ENSCSAVG00000005762	-	68	45.455	ENSETEG00000001427	NFX1	66	45.455	Echinops_telfairi
ENSCSAVG00000005762	-	71	45.896	ENSEBUG00000006923	si:dkey-10f23.2	62	45.896	Eptatretus_burgeri
ENSCSAVG00000005762	-	71	46.667	ENSEASG00005004230	NFX1	66	46.667	Equus_asinus_asinus
ENSCSAVG00000005762	-	76	44.937	ENSECAG00000021305	NFX1	72	45.402	Equus_caballus
ENSCSAVG00000005762	-	60	52.239	ENSEEUG00000001694	NFX1	62	52.239	Erinaceus_europaeus
ENSCSAVG00000005762	-	71	43.140	ENSELUG00000007422	si:dkey-10f23.2	78	40.197	Esox_lucius
ENSCSAVG00000005762	-	71	46.486	ENSFCAG00000007905	NFX1	71	46.486	Felis_catus
ENSCSAVG00000005762	-	86	42.427	ENSFALG00000013143	NFX1	85	42.427	Ficedula_albicollis
ENSCSAVG00000005762	-	70	46.856	ENSFDAG00000012320	NFX1	70	47.679	Fukomys_damarensis
ENSCSAVG00000005762	-	78	42.953	ENSFHEG00000017330	si:dkey-10f23.2	80	42.953	Fundulus_heteroclitus
ENSCSAVG00000005762	-	65	47.684	ENSGMOG00000006198	si:dkey-10f23.2	99	47.684	Gadus_morhua
ENSCSAVG00000005762	-	75	46.190	ENSGALG00000043724	NFX1	73	46.190	Gallus_gallus
ENSCSAVG00000005762	-	83	41.207	ENSGAFG00000000226	si:dkey-10f23.2	88	41.207	Gambusia_affinis
ENSCSAVG00000005762	-	66	46.032	ENSGACG00000004560	si:dkey-10f23.2	98	46.032	Gasterosteus_aculeatus
ENSCSAVG00000005762	-	68	48.765	ENSGGOG00000006751	NFX1	67	48.765	Gorilla_gorilla
ENSCSAVG00000005762	-	81	43.146	ENSHBUG00000015403	si:dkey-10f23.2	96	40.230	Haplochromis_burtoni
ENSCSAVG00000005762	-	67	48.892	ENSHGLG00000008375	NFX1	69	48.350	Heterocephalus_glaber_female
ENSCSAVG00000005762	-	67	48.892	ENSHGLG00100016433	NFX1	69	48.350	Heterocephalus_glaber_male
ENSCSAVG00000005762	-	68	47.804	ENSHCOG00000001235	si:dkey-10f23.2	75	47.804	Hippocampus_comes
ENSCSAVG00000005762	-	84	41.537	ENSIPUG00000005961	si:dkey-10f23.2	88	41.905	Ictalurus_punctatus
ENSCSAVG00000005762	-	73	46.053	ENSSTOG00000006984	NFX1	71	46.929	Ictidomys_tridecemlineatus
ENSCSAVG00000005762	-	71	47.342	ENSJJAG00000023303	Nfx1	72	47.750	Jaculus_jaculus
ENSCSAVG00000005762	-	67	46.658	ENSKMAG00000016306	si:dkey-10f23.2	70	46.658	Kryptolebias_marmoratus
ENSCSAVG00000005762	-	79	41.228	ENSLBEG00000013253	si:dkey-10f23.2	92	38.960	Labrus_bergylta
ENSCSAVG00000005762	-	72	45.488	ENSLACG00000000769	NFX1	79	45.488	Latimeria_chalumnae
ENSCSAVG00000005762	-	68	47.341	ENSLOCG00000011211	si:dkey-10f23.2	87	47.341	Lepisosteus_oculatus
ENSCSAVG00000005762	-	67	48.497	ENSMFAG00000038715	NFX1	67	48.497	Macaca_fascicularis
ENSCSAVG00000005762	-	67	48.366	ENSMMUG00000043096	NFX1	68	48.037	Macaca_mulatta
ENSCSAVG00000005762	-	67	48.497	ENSMNEG00000036057	NFX1	67	48.497	Macaca_nemestrina
ENSCSAVG00000005762	-	67	48.497	ENSMLEG00000040882	NFX1	67	48.497	Mandrillus_leucophaeus
ENSCSAVG00000005762	-	66	48.936	ENSMAMG00000010139	si:dkey-10f23.2	96	39.564	Mastacembelus_armatus
ENSCSAVG00000005762	-	81	43.146	ENSMZEG00005018390	si:dkey-10f23.2	96	40.230	Maylandia_zebra
ENSCSAVG00000005762	-	68	46.354	ENSMICG00000012124	NFX1	67	46.354	Microcebus_murinus
ENSCSAVG00000005762	-	67	48.497	ENSMOCG00000007616	Nfx1	68	48.497	Microtus_ochrogaster
ENSCSAVG00000005762	-	76	42.808	ENSMMOG00000004171	si:dkey-10f23.2	93	42.808	Mola_mola
ENSCSAVG00000005762	-	68	47.497	ENSMODG00000003990	NFX1	68	47.497	Monodelphis_domestica
ENSCSAVG00000005762	-	66	47.200	ENSMALG00000017326	si:dkey-10f23.2	80	47.200	Monopterus_albus
ENSCSAVG00000005762	-	67	48.485	MGP_CAROLIEiJ_G0025904	Nfx1	67	48.485	Mus_caroli
ENSCSAVG00000005762	-	71	46.552	ENSMUSG00000028423	Nfx1	72	46.552	Mus_musculus
ENSCSAVG00000005762	-	67	48.748	MGP_PahariEiJ_G0024027	Nfx1	67	48.748	Mus_pahari
ENSCSAVG00000005762	-	67	48.880	MGP_SPRETEiJ_G0026852	Nfx1	67	48.880	Mus_spretus
ENSCSAVG00000005762	-	71	46.486	ENSMPUG00000004111	NFX1	71	46.486	Mustela_putorius_furo
ENSCSAVG00000005762	-	69	47.529	ENSMLUG00000011069	NFX1	68	48.005	Myotis_lucifugus
ENSCSAVG00000005762	-	67	47.843	ENSNGAG00000005385	Nfx1	68	47.843	Nannospalax_galili
ENSCSAVG00000005762	-	81	43.252	ENSNBRG00000013449	si:dkey-10f23.2	95	40.346	Neolamprologus_brichardi
ENSCSAVG00000005762	-	67	48.627	ENSNLEG00000005096	NFX1	67	48.627	Nomascus_leucogenys
ENSCSAVG00000005762	-	68	50.610	ENSMEUG00000012002	NFX1	62	50.610	Notamacropus_eugenii
ENSCSAVG00000005762	-	64	48.143	ENSOPRG00000009816	NFX1	68	48.143	Ochotona_princeps
ENSCSAVG00000005762	-	67	48.370	ENSODEG00000015229	NFX1	67	48.370	Octodon_degus
ENSCSAVG00000005762	-	81	43.039	ENSONIG00000006192	si:dkey-10f23.2	94	40.440	Oreochromis_niloticus
ENSCSAVG00000005762	-	68	43.243	ENSOANG00000002524	NFX1	69	43.243	Ornithorhynchus_anatinus
ENSCSAVG00000005762	-	68	45.136	ENSOCUG00000008957	NFX1	66	45.136	Oryctolagus_cuniculus
ENSCSAVG00000005762	-	66	48.602	ENSORLG00000026662	si:dkey-10f23.2	75	48.537	Oryzias_latipes
ENSCSAVG00000005762	-	68	47.119	ENSORLG00020000170	si:dkey-10f23.2	77	47.119	Oryzias_latipes_hni
ENSCSAVG00000005762	-	68	47.503	ENSORLG00015008191	si:dkey-10f23.2	72	47.503	Oryzias_latipes_hsok
ENSCSAVG00000005762	-	66	49.200	ENSOMEG00000001814	si:dkey-10f23.2	72	49.200	Oryzias_melastigma
ENSCSAVG00000005762	-	67	46.667	ENSOGAG00000000775	NFX1	67	46.667	Otolemur_garnettii
ENSCSAVG00000005762	-	71	46.552	ENSOARG00000009478	NFX1	72	46.552	Ovis_aries
ENSCSAVG00000005762	-	68	48.635	ENSPPAG00000027871	NFX1	67	48.635	Pan_paniscus
ENSCSAVG00000005762	-	71	46.363	ENSPPRG00000000665	NFX1	71	46.363	Panthera_pardus
ENSCSAVG00000005762	-	71	46.363	ENSPTIG00000012443	NFX1	74	46.182	Panthera_tigris_altaica
ENSCSAVG00000005762	-	68	48.635	ENSPTRG00000020858	NFX1	67	48.635	Pan_troglodytes
ENSCSAVG00000005762	-	67	48.497	ENSPANG00000025304	NFX1	67	48.497	Papio_anubis
ENSCSAVG00000005762	-	67	47.320	ENSPKIG00000016899	si:dkey-10f23.2	70	47.320	Paramormyrops_kingsleyae
ENSCSAVG00000005762	-	66	47.727	ENSPSIG00000008420	NFX1	65	47.727	Pelodiscus_sinensis
ENSCSAVG00000005762	-	71	46.305	ENSPEMG00000007625	Nfx1	72	46.305	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005762	-	66	45.335	ENSPMAG00000003556	si:dkey-10f23.2	94	45.335	Petromyzon_marinus
ENSCSAVG00000005762	-	68	47.036	ENSPFOG00000012547	si:dkey-10f23.2	93	40.495	Poecilia_formosa
ENSCSAVG00000005762	-	68	46.907	ENSPLAG00000010574	si:dkey-10f23.2	98	38.905	Poecilia_latipinna
ENSCSAVG00000005762	-	76	43.311	ENSPMEG00000015322	si:dkey-10f23.2	81	43.414	Poecilia_mexicana
ENSCSAVG00000005762	-	85	41.026	ENSPREG00000006186	si:dkey-10f23.2	89	41.026	Poecilia_reticulata
ENSCSAVG00000005762	-	59	47.455	ENSPPYG00000019136	-	95	47.455	Pongo_abelii
ENSCSAVG00000005762	-	61	39.653	ENSPCAG00000006913	NFX1	61	39.653	Procavia_capensis
ENSCSAVG00000005762	-	67	47.974	ENSPCOG00000015789	NFX1	67	47.974	Propithecus_coquereli
ENSCSAVG00000005762	-	61	45.441	ENSPVAG00000011479	NFX1	61	45.441	Pteropus_vampyrus
ENSCSAVG00000005762	-	81	43.358	ENSPNYG00000002175	si:dkey-10f23.2	96	40.421	Pundamilia_nyererei
ENSCSAVG00000005762	-	71	46.832	ENSPNAG00000016667	si:dkey-10f23.2	78	44.194	Pygocentrus_nattereri
ENSCSAVG00000005762	-	71	46.429	ENSRNOG00000009015	Nfx1	72	46.429	Rattus_norvegicus
ENSCSAVG00000005762	-	67	48.497	ENSRROG00000026461	NFX1	73	48.497	Rhinopithecus_roxellana
ENSCSAVG00000005762	-	73	30.546	YNL023C	-	88	30.546	Saccharomyces_cerevisiae
ENSCSAVG00000005762	-	67	42.706	ENSSBOG00000035261	NFX1	64	42.706	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005762	-	66	49.735	ENSSHAG00000010272	NFX1	66	49.735	Sarcophilus_harrisii
ENSCSAVG00000005762	-	70	46.106	ENSSFOG00015019271	si:dkey-10f23.2	72	46.106	Scleropages_formosus
ENSCSAVG00000005762	-	73	43.669	ENSSMAG00000015963	si:dkey-10f23.2	93	39.075	Scophthalmus_maximus
ENSCSAVG00000005762	-	70	46.776	ENSSDUG00000009395	si:dkey-10f23.2	71	46.776	Seriola_dumerili
ENSCSAVG00000005762	-	71	46.163	ENSSLDG00000023817	si:dkey-10f23.2	72	46.163	Seriola_lalandi_dorsalis
ENSCSAVG00000005762	-	88	39.905	ENSSPAG00000012861	si:dkey-10f23.2	96	40.208	Stegastes_partitus
ENSCSAVG00000005762	-	68	46.124	ENSSSCG00000010994	NFX1	67	46.124	Sus_scrofa
ENSCSAVG00000005762	-	66	44.223	ENSTGUG00000007055	NFX1	93	44.223	Taeniopygia_guttata
ENSCSAVG00000005762	-	64	49.251	ENSTBEG00000004560	NFX1	57	49.251	Tupaia_belangeri
ENSCSAVG00000005762	-	65	60.870	ENSTTRG00000010576	NFX1	52	60.870	Tursiops_truncatus
ENSCSAVG00000005762	-	68	47.539	ENSUMAG00000006016	NFX1	74	46.059	Ursus_maritimus
ENSCSAVG00000005762	-	71	46.552	ENSVVUG00000021100	NFX1	72	46.552	Vulpes_vulpes
ENSCSAVG00000005762	-	67	48.691	ENSXETG00000014997	nfx1	67	48.691	Xenopus_tropicalis
ENSCSAVG00000005762	-	83	41.649	ENSXMAG00000001963	si:dkey-10f23.2	88	41.649	Xiphophorus_maculatus