EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000005814 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2065 bases
Position: chrreftig_51:1767231-1769295
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009892	MTS	PF05175.14	6.9e-06	1	1
ENSCSAVP00000009892	Methyltransf_31	PF13847.6	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010012	-	633	-	ENSCSAVP00000009892	210 (aa)	-	H2YX31

Gene Model

Click here to download ENSCSAVG00000005814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000005814	-	100	95.238	ENSCSAVG00000011296	-	95	95.238
ENSCSAVG00000005814	-	100	74.286	ENSCSAVG00000011294	-	95	74.286
ENSCSAVG00000005814	-	100	75.238	ENSCSAVG00000011293	-	95	75.238
ENSCSAVG00000005814	-	100	59.524	ENSCSAVG00000004321	-	95	59.524
ENSCSAVG00000005814	-	76	30.303	ENSCSAVG00000004347	-	75	30.303
ENSCSAVG00000005814	-	77	30.120	ENSCSAVG00000003331	-	66	30.120
ENSCSAVG00000005814	-	78	57.927	ENSCSAVG00000007262	-	89	57.927

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005814	-	100	52.381	ENSCING00000021159	-	95	52.381	Ciona_intestinalis