EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005816 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3709 bases
Position: chrreftig_148:402105-405813
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009894	Brix	PF04427.18	3.7e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010014	-	1681	-	ENSCSAVP00000009894	453 (aa)	-	H2YX33

Gene Model

Click here to download ENSCSAVG00000005816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005816	-	86	45.169	ENSG00000130810	PPAN	99	48.430	Homo_sapiens
ENSCSAVG00000005816	-	86	45.169	ENSG00000243207	PPAN-P2RY11	77	46.135	Homo_sapiens
ENSCSAVG00000005816	-	99	44.877	ENSAPOG00000017687	ppan	76	49.165	Acanthochromis_polyacanthus
ENSCSAVG00000005816	-	98	42.585	ENSAMEG00000011989	-	94	44.000	Ailuropoda_melanoleuca
ENSCSAVG00000005816	-	93	48.874	ENSACIG00000007417	ppan	82	48.874	Amphilophus_citrinellus
ENSCSAVG00000005816	-	99	45.902	ENSAOCG00000005416	ppan	76	49.881	Amphiprion_ocellaris
ENSCSAVG00000005816	-	99	45.902	ENSAPEG00000010382	ppan	83	47.495	Amphiprion_percula
ENSCSAVG00000005816	-	89	48.227	ENSATEG00000021221	ppan	79	48.227	Anabas_testudineus
ENSCSAVG00000005816	-	88	48.578	ENSACAG00000003838	-	76	48.578	Anolis_carolinensis
ENSCSAVG00000005816	-	79	46.369	ENSANAG00000038012	-	93	45.902	Aotus_nancymaae
ENSCSAVG00000005816	-	86	45.742	ENSANAG00000020371	-	86	45.985	Aotus_nancymaae
ENSCSAVG00000005816	-	97	46.452	ENSACLG00000019215	ppan	84	47.357	Astatotilapia_calliptera
ENSCSAVG00000005816	-	84	48.030	ENSAMXG00000032540	ppan	72	48.030	Astyanax_mexicanus
ENSCSAVG00000005816	-	89	45.093	ENSBTAG00000012745	PPAN	88	45.561	Bos_taurus
ENSCSAVG00000005816	-	71	35.758	WBGene00003062	lpd-6	55	35.976	Caenorhabditis_elegans
ENSCSAVG00000005816	-	98	42.308	ENSCJAG00000039296	PPAN	86	46.341	Callithrix_jacchus
ENSCSAVG00000005816	-	85	44.878	ENSCAFG00000017917	P2RY11	71	45.366	Canis_familiaris
ENSCSAVG00000005816	-	85	45.366	ENSCAFG00020023621	-	84	45.854	Canis_lupus_dingo
ENSCSAVG00000005816	-	89	45.093	ENSCHIG00000006450	-	90	45.116	Capra_hircus
ENSCSAVG00000005816	-	77	46.154	ENSCPOG00000025539	-	89	46.471	Cavia_porcellus
ENSCSAVG00000005816	-	86	46.098	ENSCCAG00000032527	-	86	46.341	Cebus_capucinus
ENSCSAVG00000005816	-	89	43.852	ENSCATG00000040554	-	88	44.548	Cercocebus_atys
ENSCSAVG00000005816	-	88	44.601	ENSCLAG00000009362	-	91	43.792	Chinchilla_lanigera
ENSCSAVG00000005816	-	89	44.316	ENSCSAG00000007423	-	88	44.780	Chlorocebus_sabaeus
ENSCSAVG00000005816	-	84	47.880	ENSCPBG00000005372	-	76	46.682	Chrysemys_picta_bellii
ENSCSAVG00000005816	-	97	74.554	ENSCING00000005420	ppan	90	80.196	Ciona_intestinalis
ENSCSAVG00000005816	-	77	42.933	ENSCANG00000036259	-	88	44.000	Colobus_angolensis_palliatus
ENSCSAVG00000005816	-	89	44.828	ENSCGRG00001015990	Ppan	89	44.598	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005816	-	77	44.063	ENSCGRG00000012785	Ppan	89	43.799	Cricetulus_griseus_crigri
ENSCSAVG00000005816	-	85	50.732	ENSCSEG00000021023	ppan	72	50.732	Cynoglossus_semilaevis
ENSCSAVG00000005816	-	99	47.569	ENSCVAG00000013547	ppan	79	48.858	Cyprinodon_variegatus
ENSCSAVG00000005816	-	89	50.353	ENSDARG00000022232	ppan	79	50.353	Danio_rerio
ENSCSAVG00000005816	-	68	49.515	ENSDNOG00000047670	-	67	49.515	Dasypus_novemcinctus
ENSCSAVG00000005816	-	77	48.148	ENSDORG00000003829	Ppan	94	49.107	Dipodomys_ordii
ENSCSAVG00000005816	-	83	39.267	FBgn0010770	ppan	81	40.103	Drosophila_melanogaster
ENSCSAVG00000005816	-	86	43.645	ENSETEG00000019286	-	88	43.326	Echinops_telfairi
ENSCSAVG00000005816	-	59	50.187	ENSEBUG00000004335	ppan	61	50.187	Eptatretus_burgeri
ENSCSAVG00000005816	-	95	43.363	ENSEASG00005010574	-	90	44.495	Equus_asinus_asinus
ENSCSAVG00000005816	-	95	43.267	ENSECAG00000024469	-	90	44.394	Equus_caballus
ENSCSAVG00000005816	-	88	52.009	ENSELUG00000024160	ppan	78	52.246	Esox_lucius
ENSCSAVG00000005816	-	98	41.026	ENSFCAG00000009388	-	85	42.921	Felis_catus
ENSCSAVG00000005816	-	91	48.055	ENSFHEG00000001554	ppan	80	48.055	Fundulus_heteroclitus
ENSCSAVG00000005816	-	92	46.560	ENSGMOG00000003431	ppan	81	46.789	Gadus_morhua
ENSCSAVG00000005816	-	85	40.295	ENSGALG00000051597	-	84	49.171	Gallus_gallus
ENSCSAVG00000005816	-	99	49.364	ENSGAFG00000015832	ppan	77	51.300	Gambusia_affinis
ENSCSAVG00000005816	-	87	49.282	ENSGACG00000013723	ppan	77	49.282	Gasterosteus_aculeatus
ENSCSAVG00000005816	-	91	45.169	ENSGAGG00000009455	-	82	44.660	Gopherus_agassizii
ENSCSAVG00000005816	-	76	45.109	ENSGGOG00000039459	PPAN	84	46.196	Gorilla_gorilla
ENSCSAVG00000005816	-	97	46.237	ENSHBUG00000021830	ppan	84	47.137	Haplochromis_burtoni
ENSCSAVG00000005816	-	86	44.524	ENSHGLG00000006964	-	86	45.476	Heterocephalus_glaber_female
ENSCSAVG00000005816	-	86	44.524	ENSHGLG00100011618	-	86	45.476	Heterocephalus_glaber_male
ENSCSAVG00000005816	-	93	41.309	ENSHCOG00000016751	ppan	80	40.757	Hippocampus_comes
ENSCSAVG00000005816	-	89	47.653	ENSIPUG00000005082	ppan	74	47.653	Ictalurus_punctatus
ENSCSAVG00000005816	-	85	46.437	ENSSTOG00000010828	-	84	46.437	Ictidomys_tridecemlineatus
ENSCSAVG00000005816	-	85	46.489	ENSJJAG00000016362	Ppan	85	46.489	Jaculus_jaculus
ENSCSAVG00000005816	-	88	49.647	ENSKMAG00000016509	ppan	77	49.647	Kryptolebias_marmoratus
ENSCSAVG00000005816	-	85	48.900	ENSLBEG00000020897	ppan	94	48.900	Labrus_bergylta
ENSCSAVG00000005816	-	91	43.527	ENSLACG00000001451	ppan	93	43.527	Latimeria_chalumnae
ENSCSAVG00000005816	-	95	47.174	ENSLOCG00000007381	ppan	84	47.921	Lepisosteus_oculatus
ENSCSAVG00000005816	-	90	43.692	ENSLAFG00000016399	-	90	44.860	Loxodonta_africana
ENSCSAVG00000005816	-	89	44.780	ENSMFAG00000042854	-	88	45.244	Macaca_fascicularis
ENSCSAVG00000005816	-	91	43.478	ENSMMUG00000017211	PPAN	95	50.000	Macaca_mulatta
ENSCSAVG00000005816	-	89	44.084	ENSMNEG00000031363	-	88	44.780	Macaca_nemestrina
ENSCSAVG00000005816	-	87	44.181	ENSMLEG00000042991	-	88	44.084	Mandrillus_leucophaeus
ENSCSAVG00000005816	-	88	50.000	ENSMAMG00000012418	ppan	77	50.000	Mastacembelus_armatus
ENSCSAVG00000005816	-	97	46.452	ENSMZEG00005018872	ppan	98	49.389	Maylandia_zebra
ENSCSAVG00000005816	-	89	45.853	ENSMAUG00000000310	Ppan	89	45.853	Mesocricetus_auratus
ENSCSAVG00000005816	-	87	44.391	ENSMICG00000047321	-	87	44.153	Microcebus_murinus
ENSCSAVG00000005816	-	85	46.715	ENSMOCG00000016402	Ppan	85	46.715	Microtus_ochrogaster
ENSCSAVG00000005816	-	87	50.478	ENSMMOG00000011584	ppan	78	50.478	Mola_mola
ENSCSAVG00000005816	-	82	47.487	ENSMODG00000005158	PPAN	84	46.394	Monodelphis_domestica
ENSCSAVG00000005816	-	87	50.239	ENSMALG00000015931	ppan	76	50.239	Monopterus_albus
ENSCSAVG00000005816	-	95	43.384	MGP_CAROLIEiJ_G0031850	Ppan	92	43.902	Mus_caroli
ENSCSAVG00000005816	-	91	44.170	ENSMUSG00000004100	Ppan	91	44.170	Mus_musculus
ENSCSAVG00000005816	-	93	43.478	MGP_PahariEiJ_G0014716	Ppan	94	43.478	Mus_pahari
ENSCSAVG00000005816	-	91	44.170	MGP_SPRETEiJ_G0032974	Ppan	91	44.170	Mus_spretus
ENSCSAVG00000005816	-	89	44.522	ENSMPUG00000006866	-	88	44.988	Mustela_putorius_furo
ENSCSAVG00000005816	-	88	44.706	ENSMLUG00000014186	-	88	44.706	Myotis_lucifugus
ENSCSAVG00000005816	-	66	43.119	ENSNGAG00000012813	Ppan	85	43.119	Nannospalax_galili
ENSCSAVG00000005816	-	89	49.415	ENSNBRG00000008460	ppan	78	49.415	Neolamprologus_brichardi
ENSCSAVG00000005816	-	86	45.169	ENSNLEG00000012048	-	85	46.135	Nomascus_leucogenys
ENSCSAVG00000005816	-	83	45.363	ENSMEUG00000007968	-	90	44.365	Notamacropus_eugenii
ENSCSAVG00000005816	-	87	44.578	ENSOPRG00000006982	-	51	45.060	Ochotona_princeps
ENSCSAVG00000005816	-	87	43.519	ENSODEG00000016743	-	89	43.519	Octodon_degus
ENSCSAVG00000005816	-	95	47.357	ENSONIG00000001598	ppan	84	47.357	Oreochromis_niloticus
ENSCSAVG00000005816	-	94	43.488	ENSOANG00000006740	PPAN	89	43.488	Ornithorhynchus_anatinus
ENSCSAVG00000005816	-	98	45.763	ENSORLG00000005634	ppan	79	48.349	Oryzias_latipes
ENSCSAVG00000005816	-	88	48.349	ENSORLG00020003966	ppan	79	48.349	Oryzias_latipes_hni
ENSCSAVG00000005816	-	88	48.349	ENSORLG00015016869	ppan	86	51.381	Oryzias_latipes_hsok
ENSCSAVG00000005816	-	88	49.176	ENSOMEG00000023943	ppan	79	49.176	Oryzias_melastigma
ENSCSAVG00000005816	-	87	43.396	ENSOGAG00000014454	-	87	43.632	Otolemur_garnettii
ENSCSAVG00000005816	-	83	42.857	ENSOARG00000014981	-	82	43.358	Ovis_aries
ENSCSAVG00000005816	-	86	45.169	ENSPPAG00000039744	-	85	46.135	Pan_paniscus
ENSCSAVG00000005816	-	98	41.525	ENSPPRG00000023895	-	94	43.430	Panthera_pardus
ENSCSAVG00000005816	-	88	41.080	ENSPTIG00000015960	-	94	43.176	Panthera_tigris_altaica
ENSCSAVG00000005816	-	86	45.169	ENSPTRG00000010459	PPAN	85	46.135	Pan_troglodytes
ENSCSAVG00000005816	-	89	44.084	ENSPANG00000005948	-	88	44.780	Papio_anubis
ENSCSAVG00000005816	-	94	46.756	ENSPMGG00000001212	ppan	80	47.897	Periophthalmus_magnuspinnatus
ENSCSAVG00000005816	-	85	46.860	ENSPEMG00000015393	Ppan	85	46.860	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005816	-	90	42.826	ENSPCIG00000018786	-	86	42.161	Phascolarctos_cinereus
ENSCSAVG00000005816	-	88	49.882	ENSPFOG00000005396	ppan	77	50.591	Poecilia_formosa
ENSCSAVG00000005816	-	90	50.000	ENSPLAG00000021445	ppan	82	48.780	Poecilia_latipinna
ENSCSAVG00000005816	-	88	49.882	ENSPMEG00000011625	ppan	77	50.591	Poecilia_mexicana
ENSCSAVG00000005816	-	88	49.645	ENSPREG00000006330	ppan	77	50.355	Poecilia_reticulata
ENSCSAVG00000005816	-	89	43.304	ENSPPYG00000009543	-	55	43.527	Pongo_abelii
ENSCSAVG00000005816	-	72	44.798	ENSPCAG00000007303	-	84	44.509	Procavia_capensis
ENSCSAVG00000005816	-	85	44.963	ENSPCOG00000027096	-	84	44.963	Propithecus_coquereli
ENSCSAVG00000005816	-	89	44.811	ENSPVAG00000003673	-	87	44.811	Pteropus_vampyrus
ENSCSAVG00000005816	-	97	46.237	ENSPNYG00000013872	ppan	84	47.137	Pundamilia_nyererei
ENSCSAVG00000005816	-	90	47.204	ENSPNAG00000017058	ppan	80	46.980	Pygocentrus_nattereri
ENSCSAVG00000005816	-	91	45.249	ENSRNOG00000020608	Ppan	91	45.249	Rattus_norvegicus
ENSCSAVG00000005816	-	87	45.131	ENSRBIG00000041320	-	86	46.318	Rhinopithecus_bieti
ENSCSAVG00000005816	-	81	48.509	ENSRROG00000038245	-	94	48.509	Rhinopithecus_roxellana
ENSCSAVG00000005816	-	87	45.346	ENSRROG00000034660	-	86	46.539	Rhinopithecus_roxellana
ENSCSAVG00000005816	-	80	34.615	YDR312W	-	98	34.452	Saccharomyces_cerevisiae
ENSCSAVG00000005816	-	80	34.615	YHR066W	-	98	33.778	Saccharomyces_cerevisiae
ENSCSAVG00000005816	-	98	41.915	ENSSBOG00000026246	-	86	45.122	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005816	-	75	45.604	ENSSHAG00000009305	-	85	45.604	Sarcophilus_harrisii
ENSCSAVG00000005816	-	97	47.708	ENSSFOG00015023726	ppan	79	51.435	Scleropages_formosus
ENSCSAVG00000005816	-	87	50.957	ENSSMAG00000004098	ppan	76	50.957	Scophthalmus_maximus
ENSCSAVG00000005816	-	95	47.788	ENSSDUG00000021301	ppan	82	47.788	Seriola_dumerili
ENSCSAVG00000005816	-	88	49.048	ENSSLDG00000016106	ppan	77	49.048	Seriola_lalandi_dorsalis
ENSCSAVG00000005816	-	88	49.761	ENSSPAG00000000160	ppan	76	49.761	Stegastes_partitus
ENSCSAVG00000005816	-	87	44.893	ENSSSCG00000013662	PPAN	87	45.368	Sus_scrofa
ENSCSAVG00000005816	-	89	49.763	ENSTRUG00000007656	ppan	75	52.030	Takifugu_rubripes
ENSCSAVG00000005816	-	86	50.976	ENSTNIG00000018564	ppan	85	51.220	Tetraodon_nigroviridis
ENSCSAVG00000005816	-	87	42.619	ENSTTRG00000004530	-	87	42.619	Tursiops_truncatus
ENSCSAVG00000005816	-	53	46.444	ENSUAMG00000007239	-	93	46.444	Ursus_americanus
ENSCSAVG00000005816	-	93	43.902	ENSVVUG00000028309	-	93	44.346	Vulpes_vulpes
ENSCSAVG00000005816	-	93	47.799	ENSXETG00000022055	ppan	85	47.799	Xenopus_tropicalis
ENSCSAVG00000005816	-	94	49.007	ENSXMAG00000028708	ppan	82	49.890	Xiphophorus_maculatus