EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000005823 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
2125 bases
Position
chrreftig_226:35351-37475
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000009906RRM_1PF00076.221.2e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000010026-797-ENSCSAVP00000009906185 (aa)-H2YX45
Gene Model
Click here to download ENSCSAVG00000005823's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005823's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000005823-8171.333ENSG00000114503NCBP210075.904Homo_sapiens
ENSCSAVG00000005823-8160.000ENSG00000170935NCBP2L9760.000Homo_sapiens
ENSCSAVG00000005823-8170.470ENSAPOG00000016180ncbp29170.470Acanthochromis_polyacanthus
ENSCSAVG00000005823-8171.333ENSAMEG00000003664-9671.333Ailuropoda_melanoleuca
ENSCSAVG00000005823-7653.571ENSAMEG00000019790-9253.571Ailuropoda_melanoleuca
ENSCSAVG00000005823-7754.545ENSAMEG00000018655NCBP2L9354.545Ailuropoda_melanoleuca
ENSCSAVG00000005823-8171.141ENSACIG00000010008ncbp29171.141Amphilophus_citrinellus
ENSCSAVG00000005823-6973.438ENSAOCG00000002198ncbp27073.438Amphiprion_ocellaris
ENSCSAVG00000005823-8170.470ENSAPEG00000013395ncbp29170.470Amphiprion_percula
ENSCSAVG00000005823-8271.523ENSATEG00000021649ncbp29271.523Anabas_testudineus
ENSCSAVG00000005823-7175.573ENSAPLG00000013779-9475.573Anas_platyrhynchos
ENSCSAVG00000005823-7170.229ENSAPLG00000014522-10070.229Anas_platyrhynchos
ENSCSAVG00000005823-8667.500ENSACAG00000015128-9567.500Anolis_carolinensis
ENSCSAVG00000005823-8171.333ENSANAG00000018285NCBP29671.333Aotus_nancymaae
ENSCSAVG00000005823-8270.395ENSACLG00000026775ncbp29370.395Astatotilapia_calliptera
ENSCSAVG00000005823-8272.185ENSAMXG00000041812ncbp29072.185Astyanax_mexicanus
ENSCSAVG00000005823-8171.333ENSBTAG00000008873NCBP29671.333Bos_taurus
ENSCSAVG00000005823-8559.494WBGene00009141ncbp-210067.033Caenorhabditis_elegans
ENSCSAVG00000005823-8171.333ENSCJAG00000039693NCBP29671.333Callithrix_jacchus
ENSCSAVG00000005823-8171.333ENSCAFG00000013100NCBP29671.333Canis_familiaris
ENSCSAVG00000005823-8161.074ENSCAFG00000017990NCBP2L9161.074Canis_familiaris
ENSCSAVG00000005823-8143.624ENSCAFG00020004265-9643.624Canis_lupus_dingo
ENSCSAVG00000005823-7961.644ENSCAFG00020006690NCBP2L9261.644Canis_lupus_dingo
ENSCSAVG00000005823-8171.333ENSCAFG00020003010-9671.333Canis_lupus_dingo
ENSCSAVG00000005823-8155.705ENSCHIG00000020051NCBP2L9555.705Capra_hircus
ENSCSAVG00000005823-8171.333ENSCHIG00000025737-9671.333Capra_hircus
ENSCSAVG00000005823-7748.611ENSCHIG00000018869-9948.611Capra_hircus
ENSCSAVG00000005823-8171.333ENSTSYG00000014263-9671.970Carlito_syrichta
ENSCSAVG00000005823-8170.667ENSCPOG00000002976NCBP29670.667Cavia_porcellus
ENSCSAVG00000005823-8171.333ENSCCAG00000025053NCBP29671.970Cebus_capucinus
ENSCSAVG00000005823-8171.333ENSCATG00000030004NCBP29671.333Cercocebus_atys
ENSCSAVG00000005823-8170.667ENSCLAG00000012808NCBP29670.667Chinchilla_lanigera
ENSCSAVG00000005823-8160.000ENSCSAG00000000310NCBP2L9760.000Chlorocebus_sabaeus
ENSCSAVG00000005823-8171.333ENSCSAG00000008705NCBP26471.333Chlorocebus_sabaeus
ENSCSAVG00000005823-8169.333ENSCHOG00000005967-9669.333Choloepus_hoffmanni
ENSCSAVG00000005823-8668.125ENSCPBG00000016711-9568.125Chrysemys_picta_bellii
ENSCSAVG00000005823-8268.874ENSCPBG00000004735-9668.874Chrysemys_picta_bellii
ENSCSAVG00000005823-9890.608ENSCING00000018317-9890.608Ciona_intestinalis
ENSCSAVG00000005823-7073.077ENSCANG00000039404NCBP29473.077Colobus_angolensis_palliatus
ENSCSAVG00000005823-8171.333ENSCGRG00001017056Ncbp29671.333Cricetulus_griseus_chok1gshd
ENSCSAVG00000005823-8171.333ENSCGRG00000014761Ncbp29671.333Cricetulus_griseus_crigri
ENSCSAVG00000005823-8467.742ENSCSEG00000019322ncbp29170.470Cynoglossus_semilaevis
ENSCSAVG00000005823-8269.737ENSCVAG00000012766ncbp29369.737Cyprinodon_variegatus
ENSCSAVG00000005823-8269.737ENSDARG00000014898ncbp29869.737Danio_rerio
ENSCSAVG00000005823-7073.077ENSDNOG00000047711NCBP29273.077Dasypus_novemcinctus
ENSCSAVG00000005823-8154.667ENSDNOG00000004831NCBP2L9654.667Dasypus_novemcinctus
ENSCSAVG00000005823-8171.333ENSDORG00000028653Ncbp29671.333Dipodomys_ordii
ENSCSAVG00000005823-7571.014FBgn0022943Cbp209071.014Drosophila_melanogaster
ENSCSAVG00000005823-6750.806ENSETEG00000006407-9550.806Echinops_telfairi
ENSCSAVG00000005823-7174.242ENSEBUG00000001862-6074.242Eptatretus_burgeri
ENSCSAVG00000005823-8171.333ENSEASG00005006719NCBP29671.333Equus_asinus_asinus
ENSCSAVG00000005823-7554.225ENSEASG00005019772NCBP2L8457.042Equus_asinus_asinus
ENSCSAVG00000005823-7654.167ENSECAG00000003478NCBP2L9656.944Equus_caballus
ENSCSAVG00000005823-8171.333ENSECAG00000016153NCBP29671.333Equus_caballus
ENSCSAVG00000005823-7447.794ENSEEUG00000004605NCBP2L8947.794Erinaceus_europaeus
ENSCSAVG00000005823-8071.622ENSELUG00000018927ncbp29571.622Esox_lucius
ENSCSAVG00000005823-8171.333ENSFCAG00000029865NCBP29671.333Felis_catus
ENSCSAVG00000005823-7175.573ENSFALG00000011928-9475.573Ficedula_albicollis
ENSCSAVG00000005823-8466.667ENSFALG00000007099-9966.667Ficedula_albicollis
ENSCSAVG00000005823-8170.667ENSFDAG00000010403NCBP29670.667Fukomys_damarensis
ENSCSAVG00000005823-8368.627ENSFHEG00000002308ncbp29368.627Fundulus_heteroclitus
ENSCSAVG00000005823-8470.323ENSGMOG00000018657ncbp29570.323Gadus_morhua
ENSCSAVG00000005823-8568.987ENSGALG00000005753-9468.987Gallus_gallus
ENSCSAVG00000005823-8268.874ENSGALG00000006843NCBP29668.874Gallus_gallus
ENSCSAVG00000005823-8170.470ENSGAFG00000010213ncbp29170.470Gambusia_affinis
ENSCSAVG00000005823-8368.831ENSGACG00000006238ncbp29368.831Gasterosteus_aculeatus
ENSCSAVG00000005823-8268.874ENSGAGG00000025839-9668.874Gopherus_agassizii
ENSCSAVG00000005823-8668.125ENSGAGG00000015966-9568.125Gopherus_agassizii
ENSCSAVG00000005823-7073.077ENSGGOG00000042244NCBP29473.077Gorilla_gorilla
ENSCSAVG00000005823-8159.333ENSGGOG00000014581NCBP2L9759.333Gorilla_gorilla
ENSCSAVG00000005823-8369.481ENSHBUG00000003914ncbp28169.481Haplochromis_burtoni
ENSCSAVG00000005823-7263.433ENSHGLG00000003263-8263.433Heterocephalus_glaber_female
ENSCSAVG00000005823-8170.667ENSHGLG00000019489NCBP29670.667Heterocephalus_glaber_female
ENSCSAVG00000005823-8170.667ENSHGLG00100017688NCBP29670.667Heterocephalus_glaber_male
ENSCSAVG00000005823-8148.684ENSHGLG00100015318-9548.684Heterocephalus_glaber_male
ENSCSAVG00000005823-8551.572ENSHGLG00100018377-9651.572Heterocephalus_glaber_male
ENSCSAVG00000005823-8267.763ENSHCOG00000000679ncbp29667.763Hippocampus_comes
ENSCSAVG00000005823-8171.333ENSSTOG00000001584NCBP29671.333Ictidomys_tridecemlineatus
ENSCSAVG00000005823-7073.643ENSJJAG00000013908Ncbp28073.643Jaculus_jaculus
ENSCSAVG00000005823-8170.470ENSKMAG00000009686ncbp29170.470Kryptolebias_marmoratus
ENSCSAVG00000005823-8170.667ENSLBEG00000020441ncbp29170.667Labrus_bergylta
ENSCSAVG00000005823-8370.588ENSLACG00000017474ncbp29370.588Latimeria_chalumnae
ENSCSAVG00000005823-8347.742ENSLACG00000015184-9947.742Latimeria_chalumnae
ENSCSAVG00000005823-8469.872ENSLOCG00000001518ncbp29369.872Lepisosteus_oculatus
ENSCSAVG00000005823-8171.333ENSLAFG00000006372NCBP29671.333Loxodonta_africana
ENSCSAVG00000005823-8166.667ENSLAFG00000027581NCBP2L9566.667Loxodonta_africana
ENSCSAVG00000005823-8171.333ENSMFAG00000001109NCBP29671.333Macaca_fascicularis
ENSCSAVG00000005823-8171.333ENSMMUG00000007825NCBP29473.077Macaca_mulatta
ENSCSAVG00000005823-8171.333ENSMNEG00000040649NCBP29671.333Macaca_nemestrina
ENSCSAVG00000005823-8170.470ENSMAMG00000011314ncbp29170.470Mastacembelus_armatus
ENSCSAVG00000005823-8270.395ENSMZEG00005017982ncbp29370.395Maylandia_zebra
ENSCSAVG00000005823-7374.074ENSMGAG00000002257-9674.074Meleagris_gallopavo
ENSCSAVG00000005823-8171.333ENSMAUG00000021481Ncbp29671.333Mesocricetus_auratus
ENSCSAVG00000005823-7670.714ENSMICG00000012328-9270.714Microcebus_murinus
ENSCSAVG00000005823-8171.812ENSMICG00000049214NCBP29876.190Microcebus_murinus
ENSCSAVG00000005823-8171.333ENSMOCG00000021390Ncbp29671.333Microtus_ochrogaster
ENSCSAVG00000005823-8070.946ENSMMOG00000004234ncbp29070.946Mola_mola
ENSCSAVG00000005823-8169.333ENSMODG00000023276-9669.333Monodelphis_domestica
ENSCSAVG00000005823-8167.333ENSMODG00000024607-9667.333Monodelphis_domestica
ENSCSAVG00000005823-8167.333ENSMODG00000024608-9667.333Monodelphis_domestica
ENSCSAVG00000005823-8269.536ENSMODG00000015908-9769.536Monodelphis_domestica
ENSCSAVG00000005823-8171.333MGP_CAROLIEiJ_G0020659Ncbp29671.333Mus_caroli
ENSCSAVG00000005823-8171.333ENSMUSG00000022774Ncbp29671.333Mus_musculus
ENSCSAVG00000005823-8171.333MGP_PahariEiJ_G0016363Ncbp29671.333Mus_pahari
ENSCSAVG00000005823-8171.333MGP_SPRETEiJ_G0021555Ncbp29671.333Mus_spretus
ENSCSAVG00000005823-8171.333ENSMPUG00000003806NCBP29171.333Mustela_putorius_furo
ENSCSAVG00000005823-8161.745ENSMPUG00000018445NCBP2L9661.745Mustela_putorius_furo
ENSCSAVG00000005823-5956.881ENSMLUG00000022217-9656.881Myotis_lucifugus
ENSCSAVG00000005823-8171.333ENSMLUG00000017500NCBP29671.333Myotis_lucifugus
ENSCSAVG00000005823-8171.333ENSNGAG00000011678Ncbp29671.333Nannospalax_galili
ENSCSAVG00000005823-8166.875ENSNLEG00000001727NCBP29473.077Nomascus_leucogenys
ENSCSAVG00000005823-8169.333ENSMEUG00000008126-9669.333Notamacropus_eugenii
ENSCSAVG00000005823-7970.548ENSMEUG00000004730-9470.548Notamacropus_eugenii
ENSCSAVG00000005823-8147.333ENSOPRG00000006943-9647.333Ochotona_princeps
ENSCSAVG00000005823-8170.000ENSOPRG00000007634-9670.000Ochotona_princeps
ENSCSAVG00000005823-7268.657ENSODEG00000009435-9468.657Octodon_degus
ENSCSAVG00000005823-8357.962ENSODEG00000002405-8957.962Octodon_degus
ENSCSAVG00000005823-8165.584ENSODEG00000013562-9665.584Octodon_degus
ENSCSAVG00000005823-8164.667ENSODEG00000014452-9664.667Octodon_degus
ENSCSAVG00000005823-8270.395ENSONIG00000008314ncbp29370.395Oreochromis_niloticus
ENSCSAVG00000005823-8171.333ENSOCUG00000006738NCBP29671.333Oryctolagus_cuniculus
ENSCSAVG00000005823-8269.079ENSORLG00000011235ncbp29369.079Oryzias_latipes
ENSCSAVG00000005823-8666.038ENSORLG00020006739ncbp29369.079Oryzias_latipes_hni
ENSCSAVG00000005823-8269.079ENSORLG00015004376ncbp29369.079Oryzias_latipes_hsok
ENSCSAVG00000005823-8169.799ENSOMEG00000010498ncbp29169.799Oryzias_melastigma
ENSCSAVG00000005823-8171.333ENSOGAG00000005009NCBP29671.333Otolemur_garnettii
ENSCSAVG00000005823-8171.333ENSOARG00000020367-9671.333Ovis_aries
ENSCSAVG00000005823-7855.862ENSOARG00000006784-9355.862Ovis_aries
ENSCSAVG00000005823-7073.077ENSPPAG00000036789-9473.077Pan_paniscus
ENSCSAVG00000005823-8171.333ENSPPRG00000005533NCBP29876.190Panthera_pardus
ENSCSAVG00000005823-7863.194ENSPPRG00000010989NCBP2L9463.194Panthera_pardus
ENSCSAVG00000005823-8171.333ENSPTIG00000009963NCBP29671.333Panthera_tigris_altaica
ENSCSAVG00000005823-7862.500ENSPTIG00000005892NCBP2L9462.500Panthera_tigris_altaica
ENSCSAVG00000005823-8166.000ENSPTRG00000048726NCBP29666.000Pan_troglodytes
ENSCSAVG00000005823-8270.199ENSPKIG00000025196ncbp29270.199Paramormyrops_kingsleyae
ENSCSAVG00000005823-7072.308ENSPSIG00000009533-9872.308Pelodiscus_sinensis
ENSCSAVG00000005823-7472.993ENSPSIG00000008535-9872.993Pelodiscus_sinensis
ENSCSAVG00000005823-8171.141ENSPMGG00000023837ncbp29171.141Periophthalmus_magnuspinnatus
ENSCSAVG00000005823-8272.185ENSPMAG00000007450ncbp29072.185Petromyzon_marinus
ENSCSAVG00000005823-7150.000ENSPMAG00000006518-5650.000Petromyzon_marinus
ENSCSAVG00000005823-8268.212ENSPCIG00000005127-9668.212Phascolarctos_cinereus
ENSCSAVG00000005823-8468.387ENSPFOG00000014473ncbp29368.387Poecilia_formosa
ENSCSAVG00000005823-8269.737ENSPLAG00000022463ncbp29369.737Poecilia_latipinna
ENSCSAVG00000005823-8269.737ENSPMEG00000018372ncbp29369.737Poecilia_mexicana
ENSCSAVG00000005823-8467.742ENSPREG00000021643ncbp29170.470Poecilia_reticulata
ENSCSAVG00000005823-8171.333ENSPPYG00000014449NCBP28071.333Pongo_abelii
ENSCSAVG00000005823-8159.333ENSPPYG00000020614NCBP2L9759.333Pongo_abelii
ENSCSAVG00000005823-8170.667ENSPCAG00000003219NCBP29670.667Procavia_capensis
ENSCSAVG00000005823-8171.812ENSPCOG00000017267NCBP29671.812Propithecus_coquereli
ENSCSAVG00000005823-8171.333ENSPVAG00000017273NCBP29671.333Pteropus_vampyrus
ENSCSAVG00000005823-8270.395ENSPNYG00000015623ncbp29370.395Pundamilia_nyererei
ENSCSAVG00000005823-8370.130ENSPNAG00000005941ncbp29470.130Pygocentrus_nattereri
ENSCSAVG00000005823-8171.333ENSRNOG00000048589Ncbp29671.333Rattus_norvegicus
ENSCSAVG00000005823-8171.333ENSRNOG00000001746Ncbp29671.333Rattus_norvegicus
ENSCSAVG00000005823-8172.000ENSRBIG00000028514NCBP29876.190Rhinopithecus_bieti
ENSCSAVG00000005823-8172.000ENSRROG00000032530-9672.000Rhinopithecus_roxellana
ENSCSAVG00000005823-6560.331YPL178WCBC25860.331Saccharomyces_cerevisiae
ENSCSAVG00000005823-8149.664ENSSBOG00000006326-9449.664Saimiri_boliviensis_boliviensis
ENSCSAVG00000005823-8169.333ENSSHAG00000012279-9669.333Sarcophilus_harrisii
ENSCSAVG00000005823-7170.992ENSSHAG00000004363-9970.992Sarcophilus_harrisii
ENSCSAVG00000005823-8270.199ENSSFOG00015014972ncbp29270.199Scleropages_formosus
ENSCSAVG00000005823-8168.000ENSSMAG00000020056ncbp29168.000Scophthalmus_maximus
ENSCSAVG00000005823-8269.737ENSSDUG00000015448ncbp29369.737Seriola_dumerili
ENSCSAVG00000005823-8170.470ENSSLDG00000020381ncbp27570.470Seriola_lalandi_dorsalis
ENSCSAVG00000005823-8168.667ENSSARG00000014294NCBP29668.667Sorex_araneus
ENSCSAVG00000005823-7571.739ENSSPUG00000000715-8471.739Sphenodon_punctatus
ENSCSAVG00000005823-6873.016ENSSPUG00000016545-8573.171Sphenodon_punctatus
ENSCSAVG00000005823-8369.481ENSSPAG00000021582ncbp29469.481Stegastes_partitus
ENSCSAVG00000005823-8171.333ENSSSCG00000027323NCBP29671.333Sus_scrofa
ENSCSAVG00000005823-7563.043ENSSSCG00000012562NCBP2L9163.043Sus_scrofa
ENSCSAVG00000005823-8268.212ENSTGUG00000008864-9668.212Taeniopygia_guttata
ENSCSAVG00000005823-6972.656ENSTGUG00000007323-10072.656Taeniopygia_guttata
ENSCSAVG00000005823-8169.333ENSTRUG00000018355ncbp29169.333Takifugu_rubripes
ENSCSAVG00000005823-8366.234ENSTNIG00000006065ncbp29966.234Tetraodon_nigroviridis
ENSCSAVG00000005823-7071.318ENSTBEG00000015222NCBP29771.318Tupaia_belangeri
ENSCSAVG00000005823-8171.333ENSTTRG00000013908NCBP29671.333Tursiops_truncatus
ENSCSAVG00000005823-7071.538ENSUAMG00000023879NCBP28071.538Ursus_americanus
ENSCSAVG00000005823-8158.000ENSUAMG00000006936NCBP2L9358.000Ursus_americanus
ENSCSAVG00000005823-8171.333ENSUMAG00000003147NCBP29671.333Ursus_maritimus
ENSCSAVG00000005823-8158.000ENSUMAG00000010623NCBP2L9358.000Ursus_maritimus
ENSCSAVG00000005823-6974.219ENSVPAG00000010369NCBP29874.219Vicugna_pacos
ENSCSAVG00000005823-8141.611ENSVVUG00000009790-8241.611Vulpes_vulpes
ENSCSAVG00000005823-8171.333ENSVVUG00000008595NCBP29671.333Vulpes_vulpes
ENSCSAVG00000005823-8268.421ENSXETG00000019384ncbp29768.421Xenopus_tropicalis
ENSCSAVG00000005823-8170.470ENSXCOG00000010968ncbp29170.470Xiphophorus_couchianus
ENSCSAVG00000005823-8170.470ENSXMAG00000010096ncbp29170.470Xiphophorus_maculatus

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