EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005853 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3870 bases
Position: chrreftig_54:336506-340375
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000009939	MTS	PF05175.14	4.1e-05	1	1
ENSCSAVP00000009939	Methyltransf_31	PF13847.6	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010059	-	1546	-	ENSCSAVP00000009939	308 (aa)	-	H2YX78

Gene Model

Click here to download ENSCSAVG00000005853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005853	-	77	48.333	ENSG00000132423	COQ3	64	48.333	Homo_sapiens
ENSCSAVG00000005853	-	87	43.478	ENSAPOG00000018453	coq3	80	43.478	Acanthochromis_polyacanthus
ENSCSAVG00000005853	-	77	47.899	ENSAMEG00000011217	COQ3	64	47.899	Ailuropoda_melanoleuca
ENSCSAVG00000005853	-	80	46.988	ENSACIG00000002855	coq3	78	47.390	Amphilophus_citrinellus
ENSCSAVG00000005853	-	87	43.478	ENSAOCG00000000804	coq3	80	43.841	Amphiprion_ocellaris
ENSCSAVG00000005853	-	87	43.116	ENSAPEG00000020804	coq3	80	43.478	Amphiprion_percula
ENSCSAVG00000005853	-	80	46.457	ENSATEG00000024719	coq3	75	46.457	Anabas_testudineus
ENSCSAVG00000005853	-	77	47.899	ENSAPLG00000006613	COQ3	83	47.899	Anas_platyrhynchos
ENSCSAVG00000005853	-	84	48.289	ENSACAG00000010498	COQ3	95	48.289	Anolis_carolinensis
ENSCSAVG00000005853	-	77	50.000	ENSANAG00000029640	COQ3	64	50.000	Aotus_nancymaae
ENSCSAVG00000005853	-	77	48.133	ENSAMXG00000008641	coq3	78	48.133	Astyanax_mexicanus
ENSCSAVG00000005853	-	77	48.739	ENSBTAG00000019729	COQ3	64	48.739	Bos_taurus
ENSCSAVG00000005853	-	77	37.295	WBGene00000763	coq-3	88	37.295	Caenorhabditis_elegans
ENSCSAVG00000005853	-	79	48.207	ENSCJAG00000001326	COQ3	67	48.207	Callithrix_jacchus
ENSCSAVG00000005853	-	77	49.160	ENSCAFG00000003469	COQ3	70	49.160	Canis_familiaris
ENSCSAVG00000005853	-	77	49.160	ENSCAFG00020016760	COQ3	65	49.160	Canis_lupus_dingo
ENSCSAVG00000005853	-	77	48.739	ENSCHIG00000011202	COQ3	68	48.739	Capra_hircus
ENSCSAVG00000005853	-	77	48.750	ENSTSYG00000009149	COQ3	64	48.750	Carlito_syrichta
ENSCSAVG00000005853	-	65	47.264	ENSCAPG00000005726	COQ3	76	47.264	Cavia_aperea
ENSCSAVG00000005853	-	77	47.479	ENSCPOG00000005688	COQ3	64	47.479	Cavia_porcellus
ENSCSAVG00000005853	-	77	49.167	ENSCCAG00000025442	COQ3	64	49.167	Cebus_capucinus
ENSCSAVG00000005853	-	77	49.167	ENSCATG00000009558	COQ3	65	49.167	Cercocebus_atys
ENSCSAVG00000005853	-	77	41.322	ENSCSAG00000014581	COQ3	64	41.736	Chlorocebus_sabaeus
ENSCSAVG00000005853	-	77	49.160	ENSCHOG00000009503	COQ3	65	49.160	Choloepus_hoffmanni
ENSCSAVG00000005853	-	92	44.948	ENSCPBG00000003600	COQ3	76	44.948	Chrysemys_picta_bellii
ENSCSAVG00000005853	-	99	63.636	ENSCING00000002605	-	99	63.636	Ciona_intestinalis
ENSCSAVG00000005853	-	77	40.417	ENSCANG00000034926	COQ3	62	40.650	Colobus_angolensis_palliatus
ENSCSAVG00000005853	-	86	43.820	ENSCGRG00001007261	Coq3	65	47.059	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005853	-	86	43.446	ENSCGRG00000007329	COQ3	65	46.639	Cricetulus_griseus_crigri
ENSCSAVG00000005853	-	75	46.639	ENSCSEG00000008645	coq3	76	46.639	Cynoglossus_semilaevis
ENSCSAVG00000005853	-	78	45.565	ENSCVAG00000021341	coq3	70	45.565	Cyprinodon_variegatus
ENSCSAVG00000005853	-	77	45.798	ENSDARG00000069857	coq3	74	45.798	Danio_rerio
ENSCSAVG00000005853	-	77	49.160	ENSDNOG00000045765	COQ3	80	49.160	Dasypus_novemcinctus
ENSCSAVG00000005853	-	78	39.184	FBgn0032922	CG9249	85	39.184	Drosophila_melanogaster
ENSCSAVG00000005853	-	65	41.791	ENSETEG00000013822	-	77	41.791	Echinops_telfairi
ENSCSAVG00000005853	-	55	46.784	ENSEBUG00000016355	coq3	87	46.784	Eptatretus_burgeri
ENSCSAVG00000005853	-	77	47.899	ENSEASG00005006138	COQ3	64	47.899	Equus_asinus_asinus
ENSCSAVG00000005853	-	77	47.899	ENSECAG00000016788	COQ3	64	47.899	Equus_caballus
ENSCSAVG00000005853	-	79	48.980	ENSFCAG00000018466	COQ3	66	48.980	Felis_catus
ENSCSAVG00000005853	-	77	49.580	ENSFALG00000009623	COQ3	75	49.580	Ficedula_albicollis
ENSCSAVG00000005853	-	78	47.541	ENSFHEG00000009736	coq3	73	47.541	Fundulus_heteroclitus
ENSCSAVG00000005853	-	76	45.749	ENSGMOG00000006023	coq3	98	45.000	Gadus_morhua
ENSCSAVG00000005853	-	80	49.187	ENSGALG00000015486	COQ3	86	49.187	Gallus_gallus
ENSCSAVG00000005853	-	80	44.574	ENSGAFG00000000680	coq3	76	44.574	Gambusia_affinis
ENSCSAVG00000005853	-	86	43.728	ENSGACG00000004983	coq3	94	43.728	Gasterosteus_aculeatus
ENSCSAVG00000005853	-	77	49.160	ENSGAGG00000024849	COQ3	68	49.160	Gopherus_agassizii
ENSCSAVG00000005853	-	77	49.167	ENSGGOG00000006696	COQ3	64	49.167	Gorilla_gorilla
ENSCSAVG00000005853	-	80	48.000	ENSHBUG00000015558	coq3	74	48.000	Haplochromis_burtoni
ENSCSAVG00000005853	-	77	48.319	ENSHGLG00000002982	COQ3	64	48.319	Heterocephalus_glaber_female
ENSCSAVG00000005853	-	77	48.319	ENSHGLG00100008603	COQ3	64	48.319	Heterocephalus_glaber_male
ENSCSAVG00000005853	-	84	44.981	ENSHCOG00000014459	coq3	78	44.981	Hippocampus_comes
ENSCSAVG00000005853	-	82	44.186	ENSIPUG00000004833	coq3	77	44.186	Ictalurus_punctatus
ENSCSAVG00000005853	-	77	48.739	ENSSTOG00000016562	COQ3	59	48.739	Ictidomys_tridecemlineatus
ENSCSAVG00000005853	-	82	46.850	ENSKMAG00000002723	coq3	78	46.850	Kryptolebias_marmoratus
ENSCSAVG00000005853	-	77	49.160	ENSLOCG00000017096	coq3	83	49.160	Lepisosteus_oculatus
ENSCSAVG00000005853	-	77	48.319	ENSLAFG00000006127	COQ3	73	48.319	Loxodonta_africana
ENSCSAVG00000005853	-	77	48.750	ENSMFAG00000034338	COQ3	64	48.750	Macaca_fascicularis
ENSCSAVG00000005853	-	77	48.750	ENSMNEG00000030450	COQ3	64	48.750	Macaca_nemestrina
ENSCSAVG00000005853	-	77	49.167	ENSMLEG00000031892	COQ3	64	49.167	Mandrillus_leucophaeus
ENSCSAVG00000005853	-	80	48.000	ENSMZEG00005011886	coq3	74	48.000	Maylandia_zebra
ENSCSAVG00000005853	-	77	49.580	ENSMGAG00000013560	COQ3	81	49.580	Meleagris_gallopavo
ENSCSAVG00000005853	-	77	47.059	ENSMAUG00000013286	Coq3	65	47.059	Mesocricetus_auratus
ENSCSAVG00000005853	-	77	49.160	ENSMICG00000006818	COQ3	64	49.160	Microcebus_murinus
ENSCSAVG00000005853	-	77	47.899	ENSMOCG00000014486	Coq3	64	47.899	Microtus_ochrogaster
ENSCSAVG00000005853	-	80	45.238	ENSMMOG00000017865	coq3	80	45.635	Mola_mola
ENSCSAVG00000005853	-	87	45.683	ENSMODG00000018116	COQ3	78	45.683	Monodelphis_domestica
ENSCSAVG00000005853	-	77	47.899	MGP_CAROLIEiJ_G0025848	Coq3	64	47.899	Mus_caroli
ENSCSAVG00000005853	-	77	47.059	ENSMUSG00000028247	Coq3	64	47.059	Mus_musculus
ENSCSAVG00000005853	-	77	47.899	MGP_PahariEiJ_G0023971	Coq3	64	47.899	Mus_pahari
ENSCSAVG00000005853	-	77	47.479	MGP_SPRETEiJ_G0026797	Coq3	64	47.479	Mus_spretus
ENSCSAVG00000005853	-	77	47.059	ENSMPUG00000001569	COQ3	65	47.059	Mustela_putorius_furo
ENSCSAVG00000005853	-	81	46.586	ENSMLUG00000005199	COQ3	77	46.586	Myotis_lucifugus
ENSCSAVG00000005853	-	77	48.319	ENSNGAG00000018739	Coq3	65	48.319	Nannospalax_galili
ENSCSAVG00000005853	-	80	48.400	ENSNBRG00000007451	coq3	74	48.400	Neolamprologus_brichardi
ENSCSAVG00000005853	-	77	48.750	ENSNLEG00000013664	COQ3	64	48.750	Nomascus_leucogenys
ENSCSAVG00000005853	-	61	48.947	ENSOPRG00000005386	COQ3	54	48.947	Ochotona_princeps
ENSCSAVG00000005853	-	79	47.347	ENSODEG00000001392	COQ3	69	47.347	Octodon_degus
ENSCSAVG00000005853	-	82	47.082	ENSONIG00000000124	coq3	92	45.353	Oreochromis_niloticus
ENSCSAVG00000005853	-	80	48.000	ENSOANG00000008935	COQ3	62	48.000	Ornithorhynchus_anatinus
ENSCSAVG00000005853	-	90	41.554	ENSORLG00000025966	coq3	90	41.554	Oryzias_latipes
ENSCSAVG00000005853	-	90	42.177	ENSORLG00020001246	coq3	90	42.177	Oryzias_latipes_hni
ENSCSAVG00000005853	-	84	44.000	ENSORLG00015016456	coq3	85	44.000	Oryzias_latipes_hsok
ENSCSAVG00000005853	-	80	45.669	ENSOMEG00000005649	coq3	77	45.669	Oryzias_melastigma
ENSCSAVG00000005853	-	77	49.167	ENSOGAG00000015139	COQ3	69	49.167	Otolemur_garnettii
ENSCSAVG00000005853	-	77	48.739	ENSOARG00000011897	COQ3	64	48.739	Ovis_aries
ENSCSAVG00000005853	-	77	49.167	ENSPPAG00000000909	COQ3	64	49.167	Pan_paniscus
ENSCSAVG00000005853	-	79	48.980	ENSPPRG00000001796	COQ3	66	48.980	Panthera_pardus
ENSCSAVG00000005853	-	79	48.980	ENSPTIG00000014871	COQ3	66	48.980	Panthera_tigris_altaica
ENSCSAVG00000005853	-	77	49.167	ENSPTRG00000018441	COQ3	64	49.167	Pan_troglodytes
ENSCSAVG00000005853	-	77	49.167	ENSPANG00000020865	COQ3	64	49.167	Papio_anubis
ENSCSAVG00000005853	-	77	43.697	ENSPKIG00000022973	coq3	64	43.697	Paramormyrops_kingsleyae
ENSCSAVG00000005853	-	91	44.056	ENSPSIG00000002536	COQ3	81	44.056	Pelodiscus_sinensis
ENSCSAVG00000005853	-	81	46.743	ENSPMGG00000022094	coq3	79	46.743	Periophthalmus_magnuspinnatus
ENSCSAVG00000005853	-	77	48.319	ENSPEMG00000002775	Coq3	64	48.319	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005853	-	83	46.642	ENSPCIG00000000455	COQ3	75	46.642	Phascolarctos_cinereus
ENSCSAVG00000005853	-	86	43.165	ENSPFOG00000019395	coq3	83	43.165	Poecilia_formosa
ENSCSAVG00000005853	-	80	44.922	ENSPLAG00000003598	coq3	75	44.922	Poecilia_latipinna
ENSCSAVG00000005853	-	80	45.312	ENSPMEG00000004224	coq3	75	45.312	Poecilia_mexicana
ENSCSAVG00000005853	-	85	43.173	ENSPREG00000015754	coq3	83	43.173	Poecilia_reticulata
ENSCSAVG00000005853	-	77	48.739	ENSPPYG00000016863	COQ3	64	48.739	Pongo_abelii
ENSCSAVG00000005853	-	65	50.246	ENSPCOG00000005473	COQ3	67	50.246	Propithecus_coquereli
ENSCSAVG00000005853	-	67	45.894	ENSPVAG00000001685	COQ3	57	45.894	Pteropus_vampyrus
ENSCSAVG00000005853	-	80	48.000	ENSPNYG00000004234	coq3	74	48.000	Pundamilia_nyererei
ENSCSAVG00000005853	-	77	47.718	ENSPNAG00000016740	coq3	76	47.718	Pygocentrus_nattereri
ENSCSAVG00000005853	-	82	44.788	ENSRNOG00000009974	Coq3	75	44.788	Rattus_norvegicus
ENSCSAVG00000005853	-	77	49.167	ENSRBIG00000026935	COQ3	64	49.167	Rhinopithecus_bieti
ENSCSAVG00000005853	-	77	49.167	ENSRROG00000037009	COQ3	64	49.167	Rhinopithecus_roxellana
ENSCSAVG00000005853	-	92	31.481	YOL096C	-	100	31.481	Saccharomyces_cerevisiae
ENSCSAVG00000005853	-	82	39.689	ENSSBOG00000020418	COQ3	66	39.689	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005853	-	77	49.160	ENSSHAG00000011955	COQ3	77	49.160	Sarcophilus_harrisii
ENSCSAVG00000005853	-	84	42.045	ENSSFOG00015011267	coq3	76	42.045	Scleropages_formosus
ENSCSAVG00000005853	-	78	45.344	ENSSMAG00000008860	coq3	72	45.749	Scophthalmus_maximus
ENSCSAVG00000005853	-	97	41.100	ENSSDUG00000008881	coq3	88	40.717	Seriola_dumerili
ENSCSAVG00000005853	-	97	41.100	ENSSLDG00000010913	coq3	88	40.717	Seriola_lalandi_dorsalis
ENSCSAVG00000005853	-	65	47.500	ENSSARG00000003539	-	84	47.500	Sorex_araneus
ENSCSAVG00000005853	-	92	46.154	ENSSPUG00000002262	COQ3	76	46.154	Sphenodon_punctatus
ENSCSAVG00000005853	-	87	42.029	ENSSPAG00000020102	coq3	94	39.375	Stegastes_partitus
ENSCSAVG00000005853	-	77	49.160	ENSTGUG00000012290	COQ3	84	49.160	Taeniopygia_guttata
ENSCSAVG00000005853	-	94	40.816	ENSTRUG00000000262	coq3	92	41.216	Takifugu_rubripes
ENSCSAVG00000005853	-	88	43.321	ENSTNIG00000007012	coq3	82	43.682	Tetraodon_nigroviridis
ENSCSAVG00000005853	-	75	38.793	ENSTBEG00000017102	COQ3	70	38.793	Tupaia_belangeri
ENSCSAVG00000005853	-	79	48.571	ENSTTRG00000004620	COQ3	66	48.571	Tursiops_truncatus
ENSCSAVG00000005853	-	77	48.739	ENSUAMG00000023921	COQ3	70	48.739	Ursus_americanus
ENSCSAVG00000005853	-	65	50.249	ENSUMAG00000021586	COQ3	64	50.249	Ursus_maritimus
ENSCSAVG00000005853	-	65	50.746	ENSVPAG00000001397	COQ3	67	50.746	Vicugna_pacos
ENSCSAVG00000005853	-	77	49.160	ENSVVUG00000015036	COQ3	64	49.160	Vulpes_vulpes
ENSCSAVG00000005853	-	82	45.703	ENSXETG00000000799	coq3	93	45.703	Xenopus_tropicalis
ENSCSAVG00000005853	-	80	45.736	ENSXMAG00000004124	coq3	76	45.736	Xiphophorus_maculatus