EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005901 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4185 bases
Position: chrreftig_24:326711-330895
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010008	Ribosomal_L28e	PF01778.17	2.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010130	-	1082	-	ENSCSAVP00000010008	295 (aa)	-	H2YXE7

Gene Model

Click here to download ENSCSAVG00000005901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005901	-	97	59.727	ENSG00000198042	MAK16	97	73.529	Homo_sapiens
ENSCSAVG00000005901	-	99	59.355	ENSAPOG00000024252	mak16	77	71.064	Acanthochromis_polyacanthus
ENSCSAVG00000005901	-	97	59.136	ENSAMEG00000002852	MAK16	97	58.276	Ailuropoda_melanoleuca
ENSCSAVG00000005901	-	64	76.064	ENSACIG00000004962	mak16	97	58.681	Amphilophus_citrinellus
ENSCSAVG00000005901	-	64	75.000	ENSAOCG00000018230	mak16	62	75.000	Amphiprion_ocellaris
ENSCSAVG00000005901	-	65	75.648	ENSAPEG00000022237	mak16	99	58.170	Amphiprion_percula
ENSCSAVG00000005901	-	99	60.066	ENSATEG00000012637	mak16	99	57.655	Anabas_testudineus
ENSCSAVG00000005901	-	97	59.934	ENSACAG00000000888	MAK16	97	58.763	Anolis_carolinensis
ENSCSAVG00000005901	-	97	60.410	ENSANAG00000030954	MAK16	97	59.524	Aotus_nancymaae
ENSCSAVG00000005901	-	65	68.394	ENSACLG00000006342	mak16	99	52.614	Astatotilapia_calliptera
ENSCSAVG00000005901	-	97	61.258	ENSAMXG00000033330	mak16	61	77.202	Astyanax_mexicanus
ENSCSAVG00000005901	-	97	58.804	ENSBTAG00000033504	MAK16	97	58.362	Bos_taurus
ENSCSAVG00000005901	-	81	53.942	WBGene00015811	C16A3.6	59	58.763	Caenorhabditis_elegans
ENSCSAVG00000005901	-	97	60.410	ENSCJAG00000048459	MAK16	97	59.864	Callithrix_jacchus
ENSCSAVG00000005901	-	97	58.804	ENSCAFG00000006325	MAK16	97	58.131	Canis_familiaris
ENSCSAVG00000005901	-	97	58.804	ENSCAFG00020001324	MAK16	97	58.131	Canis_lupus_dingo
ENSCSAVG00000005901	-	80	49.367	ENSCHIG00000014271	-	59	52.332	Capra_hircus
ENSCSAVG00000005901	-	97	58.804	ENSCHIG00000017057	-	64	74.093	Capra_hircus
ENSCSAVG00000005901	-	97	60.616	ENSTSYG00000028100	MAK16	97	56.209	Carlito_syrichta
ENSCSAVG00000005901	-	97	60.274	ENSCCAG00000025382	MAK16	97	59.655	Cebus_capucinus
ENSCSAVG00000005901	-	97	59.727	ENSCATG00000030566	MAK16	67	68.349	Cercocebus_atys
ENSCSAVG00000005901	-	97	59.794	ENSCLAG00000002726	MAK16	64	74.611	Chinchilla_lanigera
ENSCSAVG00000005901	-	88	60.075	ENSCHOG00000009081	MAK16	89	59.398	Choloepus_hoffmanni
ENSCSAVG00000005901	-	97	56.478	ENSCPBG00000000176	MAK16	77	67.234	Chrysemys_picta_bellii
ENSCSAVG00000005901	-	65	92.746	ENSCING00000007225	-	92	92.746	Ciona_intestinalis
ENSCSAVG00000005901	-	97	60.068	ENSCANG00000032211	MAK16	67	68.349	Colobus_angolensis_palliatus
ENSCSAVG00000005901	-	97	57.860	ENSCGRG00001016542	Mak16	64	74.093	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005901	-	97	57.860	ENSCGRG00000007547	Mak16	64	74.093	Cricetulus_griseus_crigri
ENSCSAVG00000005901	-	80	68.776	ENSCSEG00000010069	mak16	66	74.093	Cynoglossus_semilaevis
ENSCSAVG00000005901	-	99	58.442	ENSCVAG00000017294	mak16	99	58.033	Cyprinodon_variegatus
ENSCSAVG00000005901	-	80	72.152	ENSDARG00000003527	mak16	97	67.600	Danio_rerio
ENSCSAVG00000005901	-	97	58.000	ENSDNOG00000008424	MAK16	97	60.068	Dasypus_novemcinctus
ENSCSAVG00000005901	-	80	50.206	ENSDORG00000024387	-	66	57.297	Dipodomys_ordii
ENSCSAVG00000005901	-	95	61.111	ENSDORG00000015722	-	96	58.681	Dipodomys_ordii
ENSCSAVG00000005901	-	65	58.549	FBgn0030067	Rbm13	55	58.549	Drosophila_melanogaster
ENSCSAVG00000005901	-	81	66.667	ENSEBUG00000011900	mak16	78	64.583	Eptatretus_burgeri
ENSCSAVG00000005901	-	97	58.140	ENSEASG00005016762	MAK16	64	73.575	Equus_asinus_asinus
ENSCSAVG00000005901	-	97	58.140	ENSECAG00000016532	MAK16	64	73.575	Equus_caballus
ENSCSAVG00000005901	-	97	61.224	ENSEEUG00000006280	MAK16	64	74.611	Erinaceus_europaeus
ENSCSAVG00000005901	-	80	69.874	ENSELUG00000008291	mak16	99	52.903	Esox_lucius
ENSCSAVG00000005901	-	97	59.450	ENSFCAG00000033972	MAK16	97	58.478	Felis_catus
ENSCSAVG00000005901	-	80	67.660	ENSFALG00000006827	MAK16	65	73.057	Ficedula_albicollis
ENSCSAVG00000005901	-	80	68.908	ENSFDAG00000012817	MAK16	64	74.611	Fukomys_damarensis
ENSCSAVG00000005901	-	99	59.609	ENSFHEG00000007084	mak16	77	71.064	Fundulus_heteroclitus
ENSCSAVG00000005901	-	95	59.076	ENSGMOG00000000511	mak16	96	59.582	Gadus_morhua
ENSCSAVG00000005901	-	80	66.809	ENSGALG00000001663	MAK16	65	73.057	Gallus_gallus
ENSCSAVG00000005901	-	99	59.211	ENSGAFG00000015800	mak16	99	59.866	Gambusia_affinis
ENSCSAVG00000005901	-	99	60.201	ENSGACG00000001081	mak16	64	76.166	Gasterosteus_aculeatus
ENSCSAVG00000005901	-	97	55.853	ENSGAGG00000022177	MAK16	77	65.957	Gopherus_agassizii
ENSCSAVG00000005901	-	97	59.727	ENSGGOG00000010487	MAK16	63	74.093	Gorilla_gorilla
ENSCSAVG00000005901	-	65	68.394	ENSHBUG00000006023	mak16	99	55.743	Haplochromis_burtoni
ENSCSAVG00000005901	-	97	59.732	ENSHGLG00000002981	MAK16	97	55.082	Heterocephalus_glaber_female
ENSCSAVG00000005901	-	97	59.732	ENSHGLG00100007722	MAK16	97	55.082	Heterocephalus_glaber_male
ENSCSAVG00000005901	-	80	68.908	ENSIPUG00000005863	mak16	61	75.130	Ictalurus_punctatus
ENSCSAVG00000005901	-	97	57.860	ENSSTOG00000007812	MAK16	67	67.890	Ictidomys_tridecemlineatus
ENSCSAVG00000005901	-	97	59.450	ENSJJAG00000015237	-	65	73.575	Jaculus_jaculus
ENSCSAVG00000005901	-	97	49.828	ENSJJAG00000020605	-	61	59.067	Jaculus_jaculus
ENSCSAVG00000005901	-	80	61.826	ENSJJAG00000000383	-	70	67.358	Jaculus_jaculus
ENSCSAVG00000005901	-	80	67.234	ENSKMAG00000011338	mak16	63	72.539	Kryptolebias_marmoratus
ENSCSAVG00000005901	-	65	76.166	ENSLBEG00000026813	mak16	62	76.166	Labrus_bergylta
ENSCSAVG00000005901	-	80	68.776	ENSLACG00000018758	MAK16	63	75.648	Latimeria_chalumnae
ENSCSAVG00000005901	-	99	60.897	ENSLOCG00000015135	mak16	99	59.744	Lepisosteus_oculatus
ENSCSAVG00000005901	-	97	58.472	ENSLAFG00000026404	MAK16	64	74.611	Loxodonta_africana
ENSCSAVG00000005901	-	97	60.068	ENSMFAG00000031257	MAK16	63	74.611	Macaca_fascicularis
ENSCSAVG00000005901	-	97	60.068	ENSMMUG00000010244	MAK16	63	74.611	Macaca_mulatta
ENSCSAVG00000005901	-	97	60.068	ENSMNEG00000035461	MAK16	63	74.611	Macaca_nemestrina
ENSCSAVG00000005901	-	97	59.932	ENSMLEG00000028683	MAK16	97	58.219	Mandrillus_leucophaeus
ENSCSAVG00000005901	-	65	75.130	ENSMAMG00000018478	mak16	99	59.406	Mastacembelus_armatus
ENSCSAVG00000005901	-	65	76.684	ENSMZEG00005001916	mak16	76	64.167	Maylandia_zebra
ENSCSAVG00000005901	-	78	67.391	ENSMGAG00000001635	MAK16	76	63.559	Meleagris_gallopavo
ENSCSAVG00000005901	-	97	58.054	ENSMAUG00000008496	Mak16	71	71.759	Mesocricetus_auratus
ENSCSAVG00000005901	-	97	58.361	ENSMICG00000013106	MAK16	67	68.807	Microcebus_murinus
ENSCSAVG00000005901	-	97	55.853	ENSMOCG00000007445	Mak16	63	74.093	Microtus_ochrogaster
ENSCSAVG00000005901	-	86	46.008	ENSMMOG00000020734	mak16	95	49.618	Mola_mola
ENSCSAVG00000005901	-	98	51.948	ENSMODG00000011096	MAK16	63	71.728	Monodelphis_domestica
ENSCSAVG00000005901	-	98	54.849	ENSMALG00000003829	mak16	64	70.157	Monopterus_albus
ENSCSAVG00000005901	-	67	73.604	MGP_CAROLIEiJ_G0030957	Mak16	97	60.345	Mus_caroli
ENSCSAVG00000005901	-	67	73.604	ENSMUSG00000031578	Mak16	64	74.093	Mus_musculus
ENSCSAVG00000005901	-	97	60.204	MGP_PahariEiJ_G0021426	Mak16	64	73.575	Mus_pahari
ENSCSAVG00000005901	-	67	73.604	MGP_SPRETEiJ_G0032075	Mak16	64	74.093	Mus_spretus
ENSCSAVG00000005901	-	80	68.354	ENSMPUG00000010181	MAK16	97	60.000	Mustela_putorius_furo
ENSCSAVG00000005901	-	97	58.763	ENSMLUG00000002758	MAK16	97	57.679	Myotis_lucifugus
ENSCSAVG00000005901	-	97	57.377	ENSNGAG00000008772	Mak16	63	74.211	Nannospalax_galili
ENSCSAVG00000005901	-	97	60.068	ENSNLEG00000028118	MAK16	63	74.611	Nomascus_leucogenys
ENSCSAVG00000005901	-	97	60.738	ENSMEUG00000006945	MAK16	97	60.959	Notamacropus_eugenii
ENSCSAVG00000005901	-	80	61.506	ENSOPRG00000002116	MAK16	66	59.633	Ochotona_princeps
ENSCSAVG00000005901	-	97	60.616	ENSODEG00000005524	-	97	58.621	Octodon_degus
ENSCSAVG00000005901	-	97	51.579	ENSODEG00000000020	-	67	62.176	Octodon_degus
ENSCSAVG00000005901	-	80	54.852	ENSODEG00000002030	-	66	58.031	Octodon_degus
ENSCSAVG00000005901	-	65	76.684	ENSONIG00000000560	mak16	63	76.684	Oreochromis_niloticus
ENSCSAVG00000005901	-	80	68.619	ENSOANG00000002395	MAK16	69	75.130	Ornithorhynchus_anatinus
ENSCSAVG00000005901	-	97	56.902	ENSOCUG00000008735	MAK16	97	60.481	Oryctolagus_cuniculus
ENSCSAVG00000005901	-	80	69.198	ENSORLG00000019058	mak16	97	58.644	Oryzias_latipes
ENSCSAVG00000005901	-	80	68.776	ENSORLG00015007275	mak16	97	58.305	Oryzias_latipes_hsok
ENSCSAVG00000005901	-	80	67.932	ENSOMEG00000009317	mak16	63	76.166	Oryzias_melastigma
ENSCSAVG00000005901	-	100	52.318	ENSOGAG00000024416	MAK16	100	50.166	Otolemur_garnettii
ENSCSAVG00000005901	-	97	58.140	ENSOARG00000000384	MAK16	64	74.093	Ovis_aries
ENSCSAVG00000005901	-	97	60.068	ENSPPAG00000035102	MAK16	63	74.611	Pan_paniscus
ENSCSAVG00000005901	-	97	59.450	ENSPPRG00000002317	MAK16	97	58.478	Panthera_pardus
ENSCSAVG00000005901	-	97	59.450	ENSPTIG00000014223	MAK16	97	58.478	Panthera_tigris_altaica
ENSCSAVG00000005901	-	97	59.333	ENSPTRG00000020149	MAK16	97	57.667	Pan_troglodytes
ENSCSAVG00000005901	-	97	59.060	ENSPANG00000010420	MAK16	68	66.816	Papio_anubis
ENSCSAVG00000005901	-	97	58.667	ENSPKIG00000002082	mak16	62	76.684	Paramormyrops_kingsleyae
ENSCSAVG00000005901	-	95	57.191	ENSPSIG00000012396	MAK16	95	55.518	Pelodiscus_sinensis
ENSCSAVG00000005901	-	80	63.180	ENSPMGG00000004162	mak16	58	69.072	Periophthalmus_magnuspinnatus
ENSCSAVG00000005901	-	97	57.718	ENSPEMG00000015171	Mak16	71	71.628	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005901	-	97	62.329	ENSPCIG00000028005	MAK16	97	61.644	Phascolarctos_cinereus
ENSCSAVG00000005901	-	99	58.882	ENSPFOG00000001068	mak16	99	59.532	Poecilia_formosa
ENSCSAVG00000005901	-	99	59.076	ENSPLAG00000022551	mak16	99	59.732	Poecilia_latipinna
ENSCSAVG00000005901	-	99	58.882	ENSPMEG00000006460	mak16	99	59.532	Poecilia_mexicana
ENSCSAVG00000005901	-	97	59.727	ENSPPYG00000018501	MAK16	97	55.700	Pongo_abelii
ENSCSAVG00000005901	-	97	46.230	ENSPCAG00000016090	MAK16	97	46.713	Procavia_capensis
ENSCSAVG00000005901	-	58	66.279	ENSPCOG00000018065	-	100	66.279	Propithecus_coquereli
ENSCSAVG00000005901	-	97	56.271	ENSPVAG00000004692	MAK16	66	74.611	Pteropus_vampyrus
ENSCSAVG00000005901	-	65	75.648	ENSPNAG00000014528	mak16	76	73.810	Pygocentrus_nattereri
ENSCSAVG00000005901	-	97	57.143	ENSRNOG00000010783	Mak16	65	74.093	Rattus_norvegicus
ENSCSAVG00000005901	-	97	60.068	ENSRBIG00000039940	MAK16	67	68.349	Rhinopithecus_bieti
ENSCSAVG00000005901	-	97	60.068	ENSRROG00000032196	MAK16	67	68.349	Rhinopithecus_roxellana
ENSCSAVG00000005901	-	60	56.742	YAL025C	-	96	44.595	Saccharomyces_cerevisiae
ENSCSAVG00000005901	-	97	60.410	ENSSBOG00000030325	MAK16	63	75.130	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005901	-	99	58.033	ENSSHAG00000007593	MAK16	99	59.866	Sarcophilus_harrisii
ENSCSAVG00000005901	-	86	60.150	ENSSFOG00015019462	-	99	58.712	Scleropages_formosus
ENSCSAVG00000005901	-	99	60.458	ENSSFOG00015019447	mak16	99	59.211	Scleropages_formosus
ENSCSAVG00000005901	-	67	73.096	ENSSMAG00000018432	mak16	63	74.093	Scophthalmus_maximus
ENSCSAVG00000005901	-	65	75.130	ENSSDUG00000013093	mak16	99	58.387	Seriola_dumerili
ENSCSAVG00000005901	-	64	74.468	ENSSLDG00000002408	mak16	76	69.915	Seriola_lalandi_dorsalis
ENSCSAVG00000005901	-	75	57.895	ENSSARG00000009574	MAK16	95	58.296	Sorex_araneus
ENSCSAVG00000005901	-	97	60.839	ENSSPUG00000008956	MAK16	97	60.140	Sphenodon_punctatus
ENSCSAVG00000005901	-	99	56.209	ENSSPAG00000005102	mak16	99	60.726	Stegastes_partitus
ENSCSAVG00000005901	-	97	58.497	ENSSSCG00000036947	MAK16	97	58.621	Sus_scrofa
ENSCSAVG00000005901	-	69	50.246	ENSSSCG00000032618	-	71	47.248	Sus_scrofa
ENSCSAVG00000005901	-	80	55.508	ENSTGUG00000017303	MAK16	65	58.854	Taeniopygia_guttata
ENSCSAVG00000005901	-	99	57.047	ENSTRUG00000011544	mak16	65	74.611	Takifugu_rubripes
ENSCSAVG00000005901	-	88	50.385	ENSTBEG00000001861	MAK16	89	49.434	Tupaia_belangeri
ENSCSAVG00000005901	-	97	59.107	ENSTTRG00000013015	MAK16	97	58.276	Tursiops_truncatus
ENSCSAVG00000005901	-	97	55.960	ENSUAMG00000026894	MAK16	97	58.966	Ursus_americanus
ENSCSAVG00000005901	-	97	55.960	ENSUMAG00000021133	MAK16	97	58.966	Ursus_maritimus
ENSCSAVG00000005901	-	97	54.325	ENSVPAG00000006017	MAK16	97	53.125	Vicugna_pacos
ENSCSAVG00000005901	-	97	58.804	ENSVVUG00000019933	MAK16	97	58.131	Vulpes_vulpes
ENSCSAVG00000005901	-	97	60.678	ENSXETG00000016495	mak16	97	59.732	Xenopus_tropicalis
ENSCSAVG00000005901	-	97	52.318	ENSXCOG00000012528	mak16	96	52.862	Xiphophorus_couchianus
ENSCSAVG00000005901	-	99	59.539	ENSXMAG00000029335	mak16	99	60.201	Xiphophorus_maculatus