EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000005908 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 753 bases
Position: chrreftig_26:606633-607385
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010017	G-patch	PF01585.23	6.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010139	-	753	-	ENSCSAVP00000010017	251 (aa)	-	H2YXF6

Gene Model

Click here to download ENSCSAVG00000005908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005908's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000005908	-	99	39.098	ENSG00000152133	GPATCH11	99	37.500	Homo_sapiens
ENSCSAVG00000005908	-	98	40.520	ENSAPOG00000010617	gpatch11	100	40.892	Acanthochromis_polyacanthus
ENSCSAVG00000005908	-	99	37.879	ENSAMEG00000017542	GPATCH11	99	37.879	Ailuropoda_melanoleuca
ENSCSAVG00000005908	-	98	38.976	ENSACIG00000007107	gpatch11	100	38.976	Amphilophus_citrinellus
ENSCSAVG00000005908	-	98	39.852	ENSAOCG00000003421	gpatch11	100	39.777	Amphiprion_ocellaris
ENSCSAVG00000005908	-	98	39.852	ENSAPEG00000023659	gpatch11	100	39.777	Amphiprion_percula
ENSCSAVG00000005908	-	98	40.530	ENSATEG00000015556	gpatch11	100	40.909	Anabas_testudineus
ENSCSAVG00000005908	-	98	41.732	ENSAPLG00000009863	GPATCH11	98	42.520	Anas_platyrhynchos
ENSCSAVG00000005908	-	99	39.098	ENSANAG00000015896	GPATCH11	91	39.098	Aotus_nancymaae
ENSCSAVG00000005908	-	98	40.449	ENSACLG00000024037	gpatch11	100	40.449	Astatotilapia_calliptera
ENSCSAVG00000005908	-	98	40.613	ENSAMXG00000043007	gpatch11	99	40.385	Astyanax_mexicanus
ENSCSAVG00000005908	-	99	38.202	ENSBTAG00000003861	GPATCH11	99	38.951	Bos_taurus
ENSCSAVG00000005908	-	99	39.245	ENSCJAG00000003790	GPATCH11	93	39.245	Callithrix_jacchus
ENSCSAVG00000005908	-	65	35.366	ENSCAFG00000006041	GPATCH11	93	35.366	Canis_familiaris
ENSCSAVG00000005908	-	99	36.538	ENSCAFG00020022847	GPATCH11	99	36.538	Canis_lupus_dingo
ENSCSAVG00000005908	-	98	37.736	ENSCHIG00000010173	GPATCH11	100	38.491	Capra_hircus
ENSCSAVG00000005908	-	98	38.403	ENSTSYG00000004284	GPATCH11	100	39.544	Carlito_syrichta
ENSCSAVG00000005908	-	99	39.382	ENSCAPG00000009759	GPATCH11	99	39.382	Cavia_aperea
ENSCSAVG00000005908	-	99	38.462	ENSCPOG00000012194	GPATCH11	99	38.462	Cavia_porcellus
ENSCSAVG00000005908	-	99	39.098	ENSCCAG00000032499	GPATCH11	91	39.098	Cebus_capucinus
ENSCSAVG00000005908	-	99	39.098	ENSCATG00000041807	GPATCH11	99	39.098	Cercocebus_atys
ENSCSAVG00000005908	-	99	38.783	ENSCLAG00000008061	GPATCH11	99	40.304	Chinchilla_lanigera
ENSCSAVG00000005908	-	99	39.098	ENSCSAG00000012046	GPATCH11	99	39.098	Chlorocebus_sabaeus
ENSCSAVG00000005908	-	99	38.113	ENSCHOG00000004377	GPATCH11	97	39.245	Choloepus_hoffmanni
ENSCSAVG00000005908	-	98	39.231	ENSCPBG00000024803	GPATCH11	99	38.846	Chrysemys_picta_bellii
ENSCSAVG00000005908	-	99	37.743	ENSCANG00000039104	GPATCH11	90	37.743	Colobus_angolensis_palliatus
ENSCSAVG00000005908	-	99	39.313	ENSCGRG00001022189	Gpatch11	99	39.695	Cricetulus_griseus_chok1gshd
ENSCSAVG00000005908	-	99	39.313	ENSCGRG00000004648	Gpatch11	99	39.695	Cricetulus_griseus_crigri
ENSCSAVG00000005908	-	98	39.326	ENSCSEG00000012799	gpatch11	100	39.700	Cynoglossus_semilaevis
ENSCSAVG00000005908	-	98	40.909	ENSCVAG00000014749	gpatch11	100	41.667	Cyprinodon_variegatus
ENSCSAVG00000005908	-	98	41.379	ENSDARG00000026892	gpatch11	98	40.996	Danio_rerio
ENSCSAVG00000005908	-	99	38.433	ENSDNOG00000010487	GPATCH11	98	39.552	Dasypus_novemcinctus
ENSCSAVG00000005908	-	99	39.544	ENSDORG00000002241	Gpatch11	99	39.544	Dipodomys_ordii
ENSCSAVG00000005908	-	98	37.037	FBgn0037490	CG10053	100	35.185	Drosophila_melanogaster
ENSCSAVG00000005908	-	99	38.783	ENSEASG00005007368	GPATCH11	99	38.783	Equus_asinus_asinus
ENSCSAVG00000005908	-	91	38.525	ENSECAG00000013489	GPATCH11	96	38.115	Equus_caballus
ENSCSAVG00000005908	-	98	40.909	ENSELUG00000018037	gpatch11	99	40.909	Esox_lucius
ENSCSAVG00000005908	-	98	41.406	ENSFALG00000011877	GPATCH11	100	41.406	Ficedula_albicollis
ENSCSAVG00000005908	-	99	39.163	ENSFDAG00000001096	GPATCH11	99	40.304	Fukomys_damarensis
ENSCSAVG00000005908	-	98	39.394	ENSFHEG00000000556	gpatch11	100	40.769	Fundulus_heteroclitus
ENSCSAVG00000005908	-	98	41.502	ENSGALG00000010561	GPATCH11	98	41.107	Gallus_gallus
ENSCSAVG00000005908	-	91	40.083	ENSGAFG00000005308	gpatch11	94	36.546	Gambusia_affinis
ENSCSAVG00000005908	-	55	38.776	ENSGACG00000004367	gpatch11	92	38.776	Gasterosteus_aculeatus
ENSCSAVG00000005908	-	98	39.474	ENSGAGG00000002120	GPATCH11	100	39.474	Gopherus_agassizii
ENSCSAVG00000005908	-	95	32.787	ENSGGOG00000005021	-	100	34.016	Gorilla_gorilla
ENSCSAVG00000005908	-	75	36.869	ENSGGOG00000042992	-	83	36.869	Gorilla_gorilla
ENSCSAVG00000005908	-	99	38.403	ENSHGLG00000009502	-	99	39.924	Heterocephalus_glaber_female
ENSCSAVG00000005908	-	98	35.547	ENSHGLG00000011210	-	100	36.782	Heterocephalus_glaber_female
ENSCSAVG00000005908	-	99	38.403	ENSHGLG00100004989	-	99	39.924	Heterocephalus_glaber_male
ENSCSAVG00000005908	-	97	32.549	ENSHGLG00100005773	-	96	34.766	Heterocephalus_glaber_male
ENSCSAVG00000005908	-	98	40.458	ENSHCOG00000000322	gpatch11	100	41.221	Hippocampus_comes
ENSCSAVG00000005908	-	97	36.782	ENSIPUG00000018626	gpatch11	98	36.398	Ictalurus_punctatus
ENSCSAVG00000005908	-	99	38.023	ENSSTOG00000013881	GPATCH11	99	39.924	Ictidomys_tridecemlineatus
ENSCSAVG00000005908	-	99	37.548	ENSJJAG00000015127	Gpatch11	100	37.121	Jaculus_jaculus
ENSCSAVG00000005908	-	98	39.844	ENSKMAG00000008333	gpatch11	100	39.844	Kryptolebias_marmoratus
ENSCSAVG00000005908	-	90	37.860	ENSLBEG00000021651	gpatch11	98	39.506	Labrus_bergylta
ENSCSAVG00000005908	-	98	36.364	ENSLACG00000008344	GPATCH11	98	36.364	Latimeria_chalumnae
ENSCSAVG00000005908	-	98	42.248	ENSLOCG00000015919	gpatch11	99	42.248	Lepisosteus_oculatus
ENSCSAVG00000005908	-	99	40.154	ENSLAFG00000018602	GPATCH11	99	40.154	Loxodonta_africana
ENSCSAVG00000005908	-	99	39.098	ENSMFAG00000043245	GPATCH11	99	39.098	Macaca_fascicularis
ENSCSAVG00000005908	-	99	39.098	ENSMMUG00000030867	GPATCH11	93	39.098	Macaca_mulatta
ENSCSAVG00000005908	-	99	38.521	ENSMNEG00000029239	GPATCH11	92	38.132	Macaca_nemestrina
ENSCSAVG00000005908	-	99	39.098	ENSMLEG00000043401	GPATCH11	91	39.098	Mandrillus_leucophaeus
ENSCSAVG00000005908	-	98	40.530	ENSMAMG00000017392	gpatch11	100	40.909	Mastacembelus_armatus
ENSCSAVG00000005908	-	98	40.755	ENSMZEG00005009727	gpatch11	100	40.755	Maylandia_zebra
ENSCSAVG00000005908	-	98	38.911	ENSMGAG00000011180	GPATCH11	98	40.078	Meleagris_gallopavo
ENSCSAVG00000005908	-	99	40.076	ENSMAUG00000018451	Gpatch11	99	40.076	Mesocricetus_auratus
ENSCSAVG00000005908	-	99	38.951	ENSMICG00000003312	GPATCH11	100	39.098	Microcebus_murinus
ENSCSAVG00000005908	-	98	38.610	ENSMOCG00000012750	Gpatch11	100	39.382	Microtus_ochrogaster
ENSCSAVG00000005908	-	98	39.695	ENSMMOG00000000729	gpatch11	100	41.353	Mola_mola
ENSCSAVG00000005908	-	98	38.113	ENSMODG00000015289	GPATCH11	100	39.245	Monodelphis_domestica
ENSCSAVG00000005908	-	98	41.923	ENSMALG00000005008	gpatch11	100	41.923	Monopterus_albus
ENSCSAVG00000005908	-	99	40.226	MGP_CAROLIEiJ_G0021888	Gpatch11	99	40.602	Mus_caroli
ENSCSAVG00000005908	-	99	40.530	ENSMUSG00000050668	Gpatch11	98	41.758	Mus_musculus
ENSCSAVG00000005908	-	99	39.326	MGP_SPRETEiJ_G0022801	Gpatch11	99	38.951	Mus_spretus
ENSCSAVG00000005908	-	99	38.951	ENSMPUG00000010020	GPATCH11	99	38.951	Mustela_putorius_furo
ENSCSAVG00000005908	-	99	38.258	ENSMLUG00000003506	GPATCH11	99	38.258	Myotis_lucifugus
ENSCSAVG00000005908	-	97	39.695	ENSNGAG00000002929	Gpatch11	98	40.458	Nannospalax_galili
ENSCSAVG00000005908	-	98	40.755	ENSNBRG00000012291	gpatch11	100	40.755	Neolamprologus_brichardi
ENSCSAVG00000005908	-	98	40.977	ENSNBRG00000019293	gpatch11	100	40.977	Neolamprologus_brichardi
ENSCSAVG00000005908	-	99	35.581	ENSNLEG00000035127	-	93	36.330	Nomascus_leucogenys
ENSCSAVG00000005908	-	91	37.805	ENSMEUG00000005748	GPATCH11	97	37.805	Notamacropus_eugenii
ENSCSAVG00000005908	-	98	38.911	ENSOPRG00000008150	GPATCH11	91	39.689	Ochotona_princeps
ENSCSAVG00000005908	-	99	39.245	ENSODEG00000011404	GPATCH11	99	40.755	Octodon_degus
ENSCSAVG00000005908	-	98	40.449	ENSONIG00000010082	gpatch11	100	40.824	Oreochromis_niloticus
ENSCSAVG00000005908	-	98	39.405	ENSOANG00000008080	GPATCH11	100	39.777	Ornithorhynchus_anatinus
ENSCSAVG00000005908	-	99	38.202	ENSOCUG00000007217	GPATCH11	99	38.951	Oryctolagus_cuniculus
ENSCSAVG00000005908	-	98	39.015	ENSORLG00000028418	gpatch11	100	40.152	Oryzias_latipes
ENSCSAVG00000005908	-	98	39.015	ENSORLG00020014127	gpatch11	100	40.152	Oryzias_latipes_hni
ENSCSAVG00000005908	-	98	39.015	ENSORLG00015023144	gpatch11	100	40.152	Oryzias_latipes_hsok
ENSCSAVG00000005908	-	98	40.377	ENSOMEG00000019972	gpatch11	100	41.132	Oryzias_melastigma
ENSCSAVG00000005908	-	98	39.474	ENSOGAG00000001387	GPATCH11	100	39.474	Otolemur_garnettii
ENSCSAVG00000005908	-	99	37.500	ENSOARG00000009846	GPATCH11	99	38.636	Ovis_aries
ENSCSAVG00000005908	-	99	39.098	ENSPPAG00000043328	GPATCH11	91	39.098	Pan_paniscus
ENSCSAVG00000005908	-	99	37.828	ENSPPRG00000003253	GPATCH11	93	37.828	Panthera_pardus
ENSCSAVG00000005908	-	99	38.202	ENSPTIG00000021056	GPATCH11	93	38.202	Panthera_tigris_altaica
ENSCSAVG00000005908	-	99	39.098	ENSPTRG00000011832	GPATCH11	91	39.098	Pan_troglodytes
ENSCSAVG00000005908	-	99	39.098	ENSPANG00000008265	GPATCH11	93	39.098	Papio_anubis
ENSCSAVG00000005908	-	98	40.449	ENSPKIG00000024060	gpatch11	100	40.824	Paramormyrops_kingsleyae
ENSCSAVG00000005908	-	98	39.474	ENSPSIG00000018046	GPATCH11	100	39.474	Pelodiscus_sinensis
ENSCSAVG00000005908	-	98	39.464	ENSPMGG00000001681	gpatch11	99	38.846	Periophthalmus_magnuspinnatus
ENSCSAVG00000005908	-	98	40.996	ENSPEMG00000011862	Gpatch11	97	41.379	Peromyscus_maniculatus_bairdii
ENSCSAVG00000005908	-	97	35.659	ENSPMAG00000007966	gpatch11	98	36.822	Petromyzon_marinus
ENSCSAVG00000005908	-	98	39.552	ENSPCIG00000010983	GPATCH11	100	39.552	Phascolarctos_cinereus
ENSCSAVG00000005908	-	98	38.290	ENSPFOG00000019450	gpatch11	100	38.662	Poecilia_formosa
ENSCSAVG00000005908	-	98	40.909	ENSPLAG00000022979	gpatch11	100	41.288	Poecilia_latipinna
ENSCSAVG00000005908	-	98	40.530	ENSPMEG00000013602	gpatch11	100	40.909	Poecilia_mexicana
ENSCSAVG00000005908	-	98	40.299	ENSPREG00000007844	gpatch11	100	40.672	Poecilia_reticulata
ENSCSAVG00000005908	-	99	39.098	ENSPPYG00000012494	GPATCH11	99	39.098	Pongo_abelii
ENSCSAVG00000005908	-	79	30.952	ENSPCAG00000012983	GPATCH11	74	33.333	Procavia_capensis
ENSCSAVG00000005908	-	98	38.783	ENSPCOG00000017383	GPATCH11	100	38.783	Propithecus_coquereli
ENSCSAVG00000005908	-	98	40.075	ENSPNYG00000014257	gpatch11	100	40.075	Pundamilia_nyererei
ENSCSAVG00000005908	-	98	36.567	ENSPNAG00000000500	gpatch11	99	36.981	Pygocentrus_nattereri
ENSCSAVG00000005908	-	98	40.000	ENSRNOG00000025317	Gpatch11	100	40.530	Rattus_norvegicus
ENSCSAVG00000005908	-	91	36.364	ENSRBIG00000040541	GPATCH11	91	36.364	Rhinopithecus_bieti
ENSCSAVG00000005908	-	86	32.174	ENSRROG00000014332	-	94	33.482	Rhinopithecus_roxellana
ENSCSAVG00000005908	-	99	39.474	ENSRROG00000039341	GPATCH11	99	39.474	Rhinopithecus_roxellana
ENSCSAVG00000005908	-	99	39.098	ENSSBOG00000029397	GPATCH11	91	39.098	Saimiri_boliviensis_boliviensis
ENSCSAVG00000005908	-	98	38.023	ENSSHAG00000014025	GPATCH11	99	38.023	Sarcophilus_harrisii
ENSCSAVG00000005908	-	98	40.755	ENSSFOG00015009032	gpatch11	99	41.132	Scleropages_formosus
ENSCSAVG00000005908	-	98	40.590	ENSSMAG00000010220	gpatch11	100	40.959	Scophthalmus_maximus
ENSCSAVG00000005908	-	98	40.741	ENSSDUG00000002757	gpatch11	100	41.111	Seriola_dumerili
ENSCSAVG00000005908	-	98	40.741	ENSSLDG00000024915	gpatch11	100	41.481	Seriola_lalandi_dorsalis
ENSCSAVG00000005908	-	98	37.308	ENSSPUG00000014858	GPATCH11	100	38.077	Sphenodon_punctatus
ENSCSAVG00000005908	-	98	39.927	ENSSPAG00000007690	gpatch11	100	41.328	Stegastes_partitus
ENSCSAVG00000005908	-	99	39.615	ENSSSCG00000008497	GPATCH11	99	41.154	Sus_scrofa
ENSCSAVG00000005908	-	98	40.945	ENSTGUG00000008777	GPATCH11	99	40.945	Taeniopygia_guttata
ENSCSAVG00000005908	-	98	40.377	ENSTRUG00000024052	gpatch11	100	40.755	Takifugu_rubripes
ENSCSAVG00000005908	-	99	40.075	ENSTNIG00000001655	gpatch11	99	40.075	Tetraodon_nigroviridis
ENSCSAVG00000005908	-	99	38.636	ENSUAMG00000015138	GPATCH11	99	38.636	Ursus_americanus
ENSCSAVG00000005908	-	99	38.258	ENSUMAG00000014770	GPATCH11	99	38.258	Ursus_maritimus
ENSCSAVG00000005908	-	99	40.000	ENSVPAG00000003301	GPATCH11	97	40.000	Vicugna_pacos
ENSCSAVG00000005908	-	99	36.154	ENSVVUG00000018917	-	99	36.154	Vulpes_vulpes
ENSCSAVG00000005908	-	98	38.931	ENSXETG00000018544	gpatch11	99	38.931	Xenopus_tropicalis
ENSCSAVG00000005908	-	98	39.394	ENSXCOG00000007004	gpatch11	100	39.773	Xiphophorus_couchianus
ENSCSAVG00000005908	-	98	40.530	ENSXMAG00000006508	gpatch11	100	40.909	Xiphophorus_maculatus