EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000005965 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
10856 bases
Position
chrreftig_193:25995-36850
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000010124CRM1_CPF08767.111.4e-12311
ENSCSAVP00000010122CRM1_CPF08767.111.6e-12311
ENSCSAVP00000010123CRM1_CPF08767.112.6e-12211
ENSCSAVP00000010125CRM1_CPF08767.112.2e-8911
ENSCSAVP00000010123Xpo1PF08389.122.2e-4011
ENSCSAVP00000010122Xpo1PF08389.124.7e-4011
ENSCSAVP00000010125Xpo1PF08389.121.9e-3711
ENSCSAVP00000010124Xpo1PF08389.122.3e-2511
ENSCSAVP00000010124IBN_NPF03810.195.3e-1311
ENSCSAVP00000010122IBN_NPF03810.191.5e-1211
ENSCSAVP00000010123IBN_NPF03810.192.1e-1211
ENSCSAVP00000010125IBN_NPF03810.191.7e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000010248-3123-ENSCSAVP000000101251041 (aa)-H2YXR4
ENSCSAVT00000010247-3307-ENSCSAVP000000101241015 (aa)-H2YXR3
ENSCSAVT00000010246-3627-ENSCSAVP000000101231117 (aa)-H2YXR2
ENSCSAVT00000010245-3537-ENSCSAVP000000101221073 (aa)-H2YXR1
Gene Model
Click here to download ENSCSAVG00000005965's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005965's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000005965-9979.832ENSG00000082898XPO19979.832Homo_sapiens
ENSCSAVG00000005965-8877.871ENSAPOG00000002354xpo1a10077.871Acanthochromis_polyacanthus
ENSCSAVG00000005965-9980.205ENSAPOG00000004984-9980.205Acanthochromis_polyacanthus
ENSCSAVG00000005965-9980.224ENSAMEG00000003460XPO19980.224Ailuropoda_melanoleuca
ENSCSAVG00000005965-8880.777ENSACIG00000010818-10080.777Amphilophus_citrinellus
ENSCSAVG00000005965-8879.768ENSACIG00000010259xpo1a10079.768Amphilophus_citrinellus
ENSCSAVG00000005965-9978.745ENSAOCG00000018914xpo1a9978.745Amphiprion_ocellaris
ENSCSAVG00000005965-9980.205ENSAOCG00000010121-9980.205Amphiprion_ocellaris
ENSCSAVG00000005965-9179.592ENSAPEG00000006583xpo1a9979.592Amphiprion_percula
ENSCSAVG00000005965-9980.205ENSAPEG00000007038-9980.205Amphiprion_percula
ENSCSAVG00000005965-9980.205ENSATEG00000008816-9980.205Anabas_testudineus
ENSCSAVG00000005965-9978.652ENSATEG00000020750xpo1a9978.652Anabas_testudineus
ENSCSAVG00000005965-9980.299ENSAPLG00000004008XPO19980.299Anas_platyrhynchos
ENSCSAVG00000005965-9980.112ENSACAG00000002501XPO19980.112Anolis_carolinensis
ENSCSAVG00000005965-9979.832ENSANAG00000020802XPO19979.832Aotus_nancymaae
ENSCSAVG00000005965-9980.205ENSACLG00000015192-9980.205Astatotilapia_calliptera
ENSCSAVG00000005965-8879.874ENSACLG00000015669xpo1a10079.874Astatotilapia_calliptera
ENSCSAVG00000005965-9980.392ENSAMXG00000012704xpo1b9980.392Astyanax_mexicanus
ENSCSAVG00000005965-8878.975ENSAMXG00000003069xpo1a10078.975Astyanax_mexicanus
ENSCSAVG00000005965-9980.299ENSBTAG00000013254XPO19980.299Bos_taurus
ENSCSAVG00000005965-9851.921WBGene00002078xpo-19851.921Caenorhabditis_elegans
ENSCSAVG00000005965-9979.832ENSCJAG00000008877XPO19979.832Callithrix_jacchus
ENSCSAVG00000005965-9980.299ENSCAFG00000003050XPO19980.299Canis_familiaris
ENSCSAVG00000005965-9480.613ENSCAFG00020026910XPO19980.613Canis_lupus_dingo
ENSCSAVG00000005965-9980.299ENSCHIG00000018132XPO19980.299Capra_hircus
ENSCSAVG00000005965-9980.299ENSTSYG00000004330XPO19980.299Carlito_syrichta
ENSCSAVG00000005965-5578.723ENSCAPG00000006454-10078.723Cavia_aperea
ENSCSAVG00000005965-9979.178ENSCPOG00000034053XPO19979.178Cavia_porcellus
ENSCSAVG00000005965-8679.791ENSCCAG00000037445XPO19079.791Cebus_capucinus
ENSCSAVG00000005965-9978.026ENSCATG00000032674XPO110080.462Cercocebus_atys
ENSCSAVG00000005965-9980.112ENSCLAG00000012953XPO19980.112Chinchilla_lanigera
ENSCSAVG00000005965-9979.832ENSCSAG00000014606XPO19979.832Chlorocebus_sabaeus
ENSCSAVG00000005965-8281.226ENSCHOG00000012088XPO18181.226Choloepus_hoffmanni
ENSCSAVG00000005965-9980.299ENSCPBG00000026239XPO19980.299Chrysemys_picta_bellii
ENSCSAVG00000005965-10094.791ENSCING00000024562-9994.791Ciona_intestinalis
ENSCSAVG00000005965-9977.477ENSCANG00000028883XPO110082.270Colobus_angolensis_palliatus
ENSCSAVG00000005965-9979.925ENSCGRG00001000263Xpo19979.925Cricetulus_griseus_chok1gshd
ENSCSAVG00000005965-9979.925ENSCGRG00000001520Xpo19979.925Cricetulus_griseus_crigri
ENSCSAVG00000005965-8879.937ENSCSEG00000001693XPO110079.937Cynoglossus_semilaevis
ENSCSAVG00000005965-9978.371ENSCVAG00000016558xpo1a9978.371Cyprinodon_variegatus
ENSCSAVG00000005965-9980.299ENSCVAG00000016788-9980.299Cyprinodon_variegatus
ENSCSAVG00000005965-9980.392ENSDARG00000063229xpo1b9980.392Danio_rerio
ENSCSAVG00000005965-9979.139ENSDARG00000078041xpo1a9979.139Danio_rerio
ENSCSAVG00000005965-9980.205ENSDNOG00000005805XPO19980.205Dasypus_novemcinctus
ENSCSAVG00000005965-9179.596ENSDORG00000013050Xpo19979.596Dipodomys_ordii
ENSCSAVG00000005965-9968.220FBgn0020497emb9968.220Drosophila_melanogaster
ENSCSAVG00000005965-8889.630ENSETEG00000018045XPO19379.140Echinops_telfairi
ENSCSAVG00000005965-9074.756ENSEBUG00000012580-10079.510Eptatretus_burgeri
ENSCSAVG00000005965-9980.299ENSEASG00005007223XPO19980.299Equus_asinus_asinus
ENSCSAVG00000005965-9980.299ENSECAG00000024920XPO19984.219Equus_caballus
ENSCSAVG00000005965-8781.928ENSEEUG00000009479XPO19175.702Erinaceus_europaeus
ENSCSAVG00000005965-8877.778ENSELUG00000014306-9977.778Esox_lucius
ENSCSAVG00000005965-8880.526ENSELUG00000012707xpo1a10080.526Esox_lucius
ENSCSAVG00000005965-9980.299ENSFCAG00000002702XPO19980.299Felis_catus
ENSCSAVG00000005965-9980.205ENSFALG00000010989XPO19980.205Ficedula_albicollis
ENSCSAVG00000005965-9978.898ENSFDAG00000014716XPO19978.898Fukomys_damarensis
ENSCSAVG00000005965-9978.933ENSFHEG00000002412xpo1a9978.933Fundulus_heteroclitus
ENSCSAVG00000005965-5569.449ENSFHEG00000018974-10083.663Fundulus_heteroclitus
ENSCSAVG00000005965-9978.879ENSGMOG00000004441xpo1a9978.879Gadus_morhua
ENSCSAVG00000005965-9974.977ENSGMOG00000019063-9974.977Gadus_morhua
ENSCSAVG00000005965-9980.299ENSGALG00000029476XPO19980.299Gallus_gallus
ENSCSAVG00000005965-8879.557ENSGAFG00000004408xpo1a10079.557Gambusia_affinis
ENSCSAVG00000005965-9180.773ENSGAFG00000003355-9880.773Gambusia_affinis
ENSCSAVG00000005965-9978.371ENSGACG00000019736xpo1a9978.371Gasterosteus_aculeatus
ENSCSAVG00000005965-9980.019ENSGACG00000002743-9980.019Gasterosteus_aculeatus
ENSCSAVG00000005965-9980.205ENSGAGG00000017558XPO19980.205Gopherus_agassizii
ENSCSAVG00000005965-9979.832ENSGGOG00000034878XPO19979.832Gorilla_gorilla
ENSCSAVG00000005965-9980.299ENSHBUG00000020037-9980.299Haplochromis_burtoni
ENSCSAVG00000005965-9978.745ENSHBUG00000007128xpo1a9978.745Haplochromis_burtoni
ENSCSAVG00000005965-9980.205ENSHGLG00000003115XPO19980.205Heterocephalus_glaber_female
ENSCSAVG00000005965-9980.205ENSHGLG00100012227XPO19980.205Heterocephalus_glaber_male
ENSCSAVG00000005965-8880.652ENSHCOG00000006949XPO110080.652Hippocampus_comes
ENSCSAVG00000005965-9979.533ENSIPUG00000024394XPO19979.533Ictalurus_punctatus
ENSCSAVG00000005965-9980.392ENSIPUG00000012891Xpo19980.392Ictalurus_punctatus
ENSCSAVG00000005965-9980.299ENSSTOG00000016122XPO19980.299Ictidomys_tridecemlineatus
ENSCSAVG00000005965-9980.112ENSJJAG00000020468Xpo19980.112Jaculus_jaculus
ENSCSAVG00000005965-9980.280ENSKMAG00000016218-9980.280Kryptolebias_marmoratus
ENSCSAVG00000005965-9978.745ENSKMAG00000004830xpo1a9978.745Kryptolebias_marmoratus
ENSCSAVG00000005965-9980.205ENSLBEG00000005740-9980.205Labrus_bergylta
ENSCSAVG00000005965-8877.254ENSLBEG00000002104xpo1a10077.254Labrus_bergylta
ENSCSAVG00000005965-9961.681ENSLACG00000018213XPO19961.681Latimeria_chalumnae
ENSCSAVG00000005965-9980.672ENSLOCG00000016095xpo1b9880.672Lepisosteus_oculatus
ENSCSAVG00000005965-9980.112ENSLAFG00000014553XPO19980.112Loxodonta_africana
ENSCSAVG00000005965-9979.832ENSMFAG00000038679XPO19979.832Macaca_fascicularis
ENSCSAVG00000005965-9979.832ENSMMUG00000006941XPO19979.832Macaca_mulatta
ENSCSAVG00000005965-9979.832ENSMNEG00000030909XPO19979.832Macaca_nemestrina
ENSCSAVG00000005965-9978.047ENSMLEG00000032004XPO19978.047Mandrillus_leucophaeus
ENSCSAVG00000005965-9980.205ENSMAMG00000010568-9980.547Mastacembelus_armatus
ENSCSAVG00000005965-9978.745ENSMAMG00000023037xpo1a9979.643Mastacembelus_armatus
ENSCSAVG00000005965-9978.745ENSMZEG00005005105xpo1a9978.745Maylandia_zebra
ENSCSAVG00000005965-9980.205ENSMZEG00005018158-9880.570Maylandia_zebra
ENSCSAVG00000005965-7182.483ENSMGAG00000001496-9982.711Meleagris_gallopavo
ENSCSAVG00000005965-9979.925ENSMAUG00000006769Xpo19979.925Mesocricetus_auratus
ENSCSAVG00000005965-9980.299ENSMICG00000027770XPO19980.299Microcebus_murinus
ENSCSAVG00000005965-9980.019ENSMOCG00000012169Xpo19980.019Microtus_ochrogaster
ENSCSAVG00000005965-8880.737ENSMMOG00000008001-10080.737Mola_mola
ENSCSAVG00000005965-8879.768ENSMMOG00000018767xpo1a10079.768Mola_mola
ENSCSAVG00000005965-9979.645ENSMODG00000002831XPO19979.645Monodelphis_domestica
ENSCSAVG00000005965-8879.727ENSMALG00000008617xpo1a10079.727Monopterus_albus
ENSCSAVG00000005965-9979.739ENSMALG00000007085-9979.739Monopterus_albus
ENSCSAVG00000005965-9979.832MGP_CAROLIEiJ_G0016136Xpo19979.832Mus_caroli
ENSCSAVG00000005965-9979.739ENSMUSG00000020290Xpo19979.739Mus_musculus
ENSCSAVG00000005965-9979.739MGP_PahariEiJ_G0016754Xpo19979.739Mus_pahari
ENSCSAVG00000005965-9979.739MGP_SPRETEiJ_G0016979Xpo19979.739Mus_spretus
ENSCSAVG00000005965-9980.299ENSMPUG00000005560XPO19980.299Mustela_putorius_furo
ENSCSAVG00000005965-9980.299ENSMLUG00000010670XPO19980.299Myotis_lucifugus
ENSCSAVG00000005965-9980.299ENSNGAG00000022158Xpo19980.299Nannospalax_galili
ENSCSAVG00000005965-9978.745ENSNBRG00000003776xpo1a9978.745Neolamprologus_brichardi
ENSCSAVG00000005965-9580.547ENSNBRG00000012229-10080.882Neolamprologus_brichardi
ENSCSAVG00000005965-9976.706ENSNLEG00000009680XPO19976.706Nomascus_leucogenys
ENSCSAVG00000005965-6386.667ENSMEUG00000013277-6386.667Notamacropus_eugenii
ENSCSAVG00000005965-9976.004ENSOPRG00000012615XPO19976.004Ochotona_princeps
ENSCSAVG00000005965-9978.992ENSODEG00000012632XPO19978.992Octodon_degus
ENSCSAVG00000005965-9380.853ENSONIG00000002969-9980.853Oreochromis_niloticus
ENSCSAVG00000005965-9976.592ENSONIG00000000019xpo1a9980.082Oreochromis_niloticus
ENSCSAVG00000005965-9780.268ENSOANG00000012417XPO110080.366Ornithorhynchus_anatinus
ENSCSAVG00000005965-9980.205ENSOCUG00000004986XPO19980.205Oryctolagus_cuniculus
ENSCSAVG00000005965-9980.299ENSORLG00000001642-9880.299Oryzias_latipes
ENSCSAVG00000005965-9978.110ENSORLG00000001559xpo1a9978.110Oryzias_latipes
ENSCSAVG00000005965-9978.110ENSORLG00020015852xpo1a9978.110Oryzias_latipes_hni
ENSCSAVG00000005965-9980.299ENSORLG00020020577-9880.299Oryzias_latipes_hni
ENSCSAVG00000005965-9978.110ENSORLG00015015414xpo1a10077.368Oryzias_latipes_hsok
ENSCSAVG00000005965-9180.773ENSORLG00015008640-9880.773Oryzias_latipes_hsok
ENSCSAVG00000005965-8879.347ENSOMEG00000007343xpo1a10079.347Oryzias_melastigma
ENSCSAVG00000005965-9980.392ENSOMEG00000001384-10080.882Oryzias_melastigma
ENSCSAVG00000005965-9977.281ENSOGAG00000000143XPO19977.281Otolemur_garnettii
ENSCSAVG00000005965-9980.224ENSOARG00000020174XPO19980.224Ovis_aries
ENSCSAVG00000005965-9979.832ENSPPAG00000029699XPO19979.832Pan_paniscus
ENSCSAVG00000005965-9980.299ENSPPRG00000024625XPO19980.299Panthera_pardus
ENSCSAVG00000005965-9980.299ENSPTIG00000012259XPO19980.299Panthera_tigris_altaica
ENSCSAVG00000005965-9979.832ENSPTRG00000011962XPO19979.832Pan_troglodytes
ENSCSAVG00000005965-9979.832ENSPANG00000006892XPO19979.832Papio_anubis
ENSCSAVG00000005965-9980.299ENSPKIG00000003545xpo1b10080.558Paramormyrops_kingsleyae
ENSCSAVG00000005965-9980.280ENSPKIG00000005688XPO19980.280Paramormyrops_kingsleyae
ENSCSAVG00000005965-9979.387ENSPSIG00000014457XPO110080.568Pelodiscus_sinensis
ENSCSAVG00000005965-8779.270ENSPMGG00000019000XPO110079.270Periophthalmus_magnuspinnatus
ENSCSAVG00000005965-9979.178ENSPMGG00000010632XPO19979.178Periophthalmus_magnuspinnatus
ENSCSAVG00000005965-9979.925ENSPEMG00000010103Xpo19979.925Peromyscus_maniculatus_bairdii
ENSCSAVG00000005965-9976.837ENSPMAG00000001270-9976.837Petromyzon_marinus
ENSCSAVG00000005965-9980.019ENSPCIG00000027737XPO19980.019Phascolarctos_cinereus
ENSCSAVG00000005965-9978.839ENSPFOG00000001349xpo1a9978.839Poecilia_formosa
ENSCSAVG00000005965-9980.299ENSPFOG00000013233-9980.299Poecilia_formosa
ENSCSAVG00000005965-9980.392ENSPLAG00000018279-9980.392Poecilia_latipinna
ENSCSAVG00000005965-9978.839ENSPLAG00000000356xpo1a9978.839Poecilia_latipinna
ENSCSAVG00000005965-9980.149ENSPMEG00000003904-9980.149Poecilia_mexicana
ENSCSAVG00000005965-9978.839ENSPMEG00000003659xpo1a9978.839Poecilia_mexicana
ENSCSAVG00000005965-9980.392ENSPREG00000010135-9980.392Poecilia_reticulata
ENSCSAVG00000005965-9978.745ENSPREG00000020796xpo1a9978.745Poecilia_reticulata
ENSCSAVG00000005965-9977.124ENSPPYG00000012383XPO19977.124Pongo_abelii
ENSCSAVG00000005965-9777.810ENSPCAG00000006798XPO110077.810Procavia_capensis
ENSCSAVG00000005965-9980.299ENSPCOG00000023123XPO19980.299Propithecus_coquereli
ENSCSAVG00000005965-9971.121ENSPVAG00000002535XPO19971.121Pteropus_vampyrus
ENSCSAVG00000005965-5575.666ENSPNYG00000006874-10075.666Pundamilia_nyererei
ENSCSAVG00000005965-9978.745ENSPNYG00000023463xpo1a9978.745Pundamilia_nyererei
ENSCSAVG00000005965-9980.392ENSPNAG00000008916xpo1b9980.392Pygocentrus_nattereri
ENSCSAVG00000005965-9979.832ENSPNAG00000014209xpo1a9979.832Pygocentrus_nattereri
ENSCSAVG00000005965-9979.645ENSRNOG00000009935Xpo19979.645Rattus_norvegicus
ENSCSAVG00000005965-9972.507ENSRBIG00000029189XPO19972.507Rhinopithecus_bieti
ENSCSAVG00000005965-9979.832ENSRROG00000038442XPO19979.832Rhinopithecus_roxellana
ENSCSAVG00000005965-9945.696YGR218WCRM19945.696Saccharomyces_cerevisiae
ENSCSAVG00000005965-8790.991ENSSBOG00000034467XPO19976.937Saimiri_boliviensis_boliviensis
ENSCSAVG00000005965-9980.299ENSSHAG00000011230XPO19980.299Sarcophilus_harrisii
ENSCSAVG00000005965-9981.471ENSSFOG00015011598xpo1b9981.471Scleropages_formosus
ENSCSAVG00000005965-9980.299ENSSFOG00015001881XPO19980.299Scleropages_formosus
ENSCSAVG00000005965-9980.205ENSSMAG00000015718-9980.205Scophthalmus_maximus
ENSCSAVG00000005965-9978.297ENSSMAG00000021007xpo1a9978.297Scophthalmus_maximus
ENSCSAVG00000005965-9980.205ENSSDUG00000017709-9980.676Seriola_dumerili
ENSCSAVG00000005965-8679.333ENSSDUG00000000812xpo1a9979.333Seriola_dumerili
ENSCSAVG00000005965-5480.727ENSSLDG00000017407xpo1a9580.727Seriola_lalandi_dorsalis
ENSCSAVG00000005965-9980.205ENSSLDG00000019530-9980.676Seriola_lalandi_dorsalis
ENSCSAVG00000005965-9480.903ENSSARG00000014000-9080.903Sorex_araneus
ENSCSAVG00000005965-9979.925ENSSPUG00000009057XPO110080.173Sphenodon_punctatus
ENSCSAVG00000005965-9978.839ENSSPAG00000010307xpo1a9978.839Stegastes_partitus
ENSCSAVG00000005965-9980.112ENSSPAG00000008738-9980.112Stegastes_partitus
ENSCSAVG00000005965-9980.205ENSSSCG00000028228XPO110081.116Sus_scrofa
ENSCSAVG00000005965-9979.518ENSTGUG00000006512XPO19979.518Taeniopygia_guttata
ENSCSAVG00000005965-9978.558ENSTRUG00000001415xpo1a9978.558Takifugu_rubripes
ENSCSAVG00000005965-9979.925ENSTRUG00000005571-9980.258Takifugu_rubripes
ENSCSAVG00000005965-9977.341ENSTNIG00000003360xpo1a9977.341Tetraodon_nigroviridis
ENSCSAVG00000005965-6386.306ENSTBEG00000014485-6986.306Tupaia_belangeri
ENSCSAVG00000005965-8978.893ENSTTRG00000013369XPO19478.893Tursiops_truncatus
ENSCSAVG00000005965-9980.299ENSUAMG00000026512XPO19980.299Ursus_americanus
ENSCSAVG00000005965-9980.205ENSUMAG00000019859XPO19980.205Ursus_maritimus
ENSCSAVG00000005965-9576.735ENSVPAG00000011446XPO19976.735Vicugna_pacos
ENSCSAVG00000005965-9980.299ENSVVUG00000012009XPO19980.299Vulpes_vulpes
ENSCSAVG00000005965-9979.645ENSXETG00000002224xpo19979.645Xenopus_tropicalis
ENSCSAVG00000005965-7489.565ENSXCOG00000006625-8389.565Xiphophorus_couchianus
ENSCSAVG00000005965-8879.452ENSXCOG00000011889XPO110079.452Xiphophorus_couchianus
ENSCSAVG00000005965-9978.371ENSXMAG00000005790xpo1a9978.371Xiphophorus_maculatus
ENSCSAVG00000005965-9980.392ENSXMAG00000007353-9980.392Xiphophorus_maculatus

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