EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000005966 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
4714 bases
Position
chrreftig_72:1522691-1527404
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000010127Ribosomal_S7PF00177.211.2e-3611
ENSCSAVP00000010128Ribosomal_S7PF00177.211.2e-3611
ENSCSAVP00000010126Ribosomal_S7PF00177.211.3e-3611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000010250-637-ENSCSAVP00000010127204 (aa)-H2YXR6
ENSCSAVT00000010251-738-ENSCSAVP00000010128204 (aa)-H2YXR6
ENSCSAVT00000010249-671-ENSCSAVP00000010126209 (aa)-H2YXR5
Gene Model
Click here to download ENSCSAVG00000005966's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000005966's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000005966-9588.144ENSG00000083845RPS59390.476Homo_sapiens
ENSCSAVG00000005966-9986.070ENSAPOG00000023785rps59986.070Acanthochromis_polyacanthus
ENSCSAVG00000005966-9588.144ENSAMEG00000007431RPS59588.144Ailuropoda_melanoleuca
ENSCSAVG00000005966-9986.567ENSACIG00000007319rps59986.567Amphilophus_citrinellus
ENSCSAVG00000005966-9083.152ENSAOCG00000021297rps57983.152Amphiprion_ocellaris
ENSCSAVG00000005966-9986.070ENSAOCG00000010721RPS59986.070Amphiprion_ocellaris
ENSCSAVG00000005966-9573.333ENSAPEG00000010045rps59473.333Amphiprion_percula
ENSCSAVG00000005966-9986.070ENSATEG00000007911rps59986.070Anabas_testudineus
ENSCSAVG00000005966-9985.572ENSACAG00000010996RPS59985.572Anolis_carolinensis
ENSCSAVG00000005966-9588.144ENSANAG00000020231-9390.476Aotus_nancymaae
ENSCSAVG00000005966-9586.082ENSANAG00000023153-9086.082Aotus_nancymaae
ENSCSAVG00000005966-9967.164ENSANAG00000035789-9868.889Aotus_nancymaae
ENSCSAVG00000005966-9986.567ENSACLG00000007312rps59986.567Astatotilapia_calliptera
ENSCSAVG00000005966-9986.070ENSAMXG00000029764rps59986.070Astyanax_mexicanus
ENSCSAVG00000005966-9588.144ENSBTAG00000015989RPS59588.144Bos_taurus
ENSCSAVG00000005966-10077.619WBGene00004474rps-510077.619Caenorhabditis_elegans
ENSCSAVG00000005966-9588.144ENSCJAG00000000304RPS59390.476Callithrix_jacchus
ENSCSAVG00000005966-9588.144ENSCAFG00000002366RPS59588.144Canis_familiaris
ENSCSAVG00000005966-10082.775ENSCAFG00020014863-9390.476Canis_lupus_dingo
ENSCSAVG00000005966-9588.144ENSCHIG00000019536RPS59588.144Capra_hircus
ENSCSAVG00000005966-9588.144ENSTSYG00000000076-9390.476Carlito_syrichta
ENSCSAVG00000005966-8686.857ENSCAPG00000017186RPS58488.889Cavia_aperea
ENSCSAVG00000005966-9588.144ENSCPOG00000023995RPS59588.144Cavia_porcellus
ENSCSAVG00000005966-9565.464ENSCCAG00000021605-9465.464Cebus_capucinus
ENSCSAVG00000005966-9574.093ENSCCAG00000036875-8974.093Cebus_capucinus
ENSCSAVG00000005966-9588.144ENSCCAG00000020744-9390.476Cebus_capucinus
ENSCSAVG00000005966-9588.144ENSCATG00000030198RPS59390.476Cercocebus_atys
ENSCSAVG00000005966-9774.242ENSCATG00000040451-9174.242Cercocebus_atys
ENSCSAVG00000005966-9588.144ENSCLAG00000000313RPS59588.144Chinchilla_lanigera
ENSCSAVG00000005966-9588.144ENSCSAG00000001598RPS59588.144Chlorocebus_sabaeus
ENSCSAVG00000005966-9867.980ENSCSAG00000009927-9867.980Chlorocebus_sabaeus
ENSCSAVG00000005966-7362.416ENSCSAG00000015430-9362.416Chlorocebus_sabaeus
ENSCSAVG00000005966-9985.572ENSCPBG00000013028RPS59985.572Chrysemys_picta_bellii
ENSCSAVG00000005966-10097.549ENSCING00000002448-10097.549Ciona_intestinalis
ENSCSAVG00000005966-9763.317ENSCANG00000028788-9663.317Colobus_angolensis_palliatus
ENSCSAVG00000005966-9588.144ENSCANG00000032591RPS59390.476Colobus_angolensis_palliatus
ENSCSAVG00000005966-9959.903ENSCANG00000003782-8664.583Colobus_angolensis_palliatus
ENSCSAVG00000005966-9588.144ENSCGRG00001014197Rps59588.144Cricetulus_griseus_chok1gshd
ENSCSAVG00000005966-9773.232ENSCGRG00000011329Rps59773.232Cricetulus_griseus_crigri
ENSCSAVG00000005966-9986.070ENSCSEG00000011153rps59986.070Cynoglossus_semilaevis
ENSCSAVG00000005966-5077.451ENSCVAG00000023171RPS56577.451Cyprinodon_variegatus
ENSCSAVG00000005966-5785.470ENSCVAG00000008716rps59485.470Cyprinodon_variegatus
ENSCSAVG00000005966-10087.255ENSDARG00000043453rps510087.255Danio_rerio
ENSCSAVG00000005966-9587.629ENSDNOG00000047505-9587.629Dasypus_novemcinctus
ENSCSAVG00000005966-9863.682ENSDNOG00000037158-8863.682Dasypus_novemcinctus
ENSCSAVG00000005966-9761.881ENSDORG00000023488-9666.154Dipodomys_ordii
ENSCSAVG00000005966-9588.144ENSDORG00000002165-9588.144Dipodomys_ordii
ENSCSAVG00000005966-9681.633FBgn0002590RpS5a8681.633Drosophila_melanogaster
ENSCSAVG00000005966-9974.762FBgn0038277RpS5b9174.762Drosophila_melanogaster
ENSCSAVG00000005966-9571.649ENSETEG00000013543-9571.649Echinops_telfairi
ENSCSAVG00000005966-8478.161ENSEBUG00000008049-7078.161Eptatretus_burgeri
ENSCSAVG00000005966-9588.144ENSEASG00005020216RPS59588.144Equus_asinus_asinus
ENSCSAVG00000005966-8982.967ENSECAG00000016340RPS55382.967Equus_caballus
ENSCSAVG00000005966-9985.149ENSELUG00000007527RS59985.149Esox_lucius
ENSCSAVG00000005966-9588.144ENSELUG00000007427rs59788.144Esox_lucius
ENSCSAVG00000005966-9588.144ENSFCAG00000027978RPS59390.476Felis_catus
ENSCSAVG00000005966-9588.144ENSFDAG00000010753RPS59588.144Fukomys_damarensis
ENSCSAVG00000005966-9986.070ENSFHEG00000009134rps59986.070Fundulus_heteroclitus
ENSCSAVG00000005966-9985.149ENSGMOG00000015218rps59985.149Gadus_morhua
ENSCSAVG00000005966-9986.567ENSGAFG00000002691rps59986.567Gambusia_affinis
ENSCSAVG00000005966-9986.070ENSGACG00000002835rps59986.070Gasterosteus_aculeatus
ENSCSAVG00000005966-9985.572ENSGAGG00000008180RPS59890.476Gopherus_agassizii
ENSCSAVG00000005966-9772.222ENSGGOG00000041414-9272.222Gorilla_gorilla
ENSCSAVG00000005966-9588.144ENSGGOG00000004258RPS59390.476Gorilla_gorilla
ENSCSAVG00000005966-9369.474ENSGGOG00000025551-9469.948Gorilla_gorilla
ENSCSAVG00000005966-8981.319ENSGGOG00000024360-8781.319Gorilla_gorilla
ENSCSAVG00000005966-9473.298ENSGGOG00000026021-9673.298Gorilla_gorilla
ENSCSAVG00000005966-5875.281ENSGGOG00000022061-8975.281Gorilla_gorilla
ENSCSAVG00000005966-9958.128ENSGGOG00000022062-9958.128Gorilla_gorilla
ENSCSAVG00000005966-9986.567ENSHBUG00000009305rps59986.567Haplochromis_burtoni
ENSCSAVG00000005966-9588.144ENSHGLG00000007229RPS59588.144Heterocephalus_glaber_female
ENSCSAVG00000005966-9588.144ENSHGLG00100013944RPS59588.144Heterocephalus_glaber_male
ENSCSAVG00000005966-9986.070ENSHCOG00000007396rps59986.070Hippocampus_comes
ENSCSAVG00000005966-9986.567ENSIPUG00000004835rps59890.476Ictalurus_punctatus
ENSCSAVG00000005966-9471.204ENSSTOG00000029731-9071.204Ictidomys_tridecemlineatus
ENSCSAVG00000005966-9588.144ENSSTOG00000005935-9588.144Ictidomys_tridecemlineatus
ENSCSAVG00000005966-9588.144ENSJJAG00000002076Rps59588.144Jaculus_jaculus
ENSCSAVG00000005966-9986.070ENSKMAG00000012994rps59986.070Kryptolebias_marmoratus
ENSCSAVG00000005966-9986.070ENSLBEG00000007150RPS59986.070Labrus_bergylta
ENSCSAVG00000005966-9980.100ENSLBEG00000019288rps59980.100Labrus_bergylta
ENSCSAVG00000005966-9986.567ENSLACG00000009935RPS59986.567Latimeria_chalumnae
ENSCSAVG00000005966-7251.020ENSLOCG00000000731-9951.020Lepisosteus_oculatus
ENSCSAVG00000005966-9588.144ENSLAFG00000008734RPS59588.144Loxodonta_africana
ENSCSAVG00000005966-10059.809ENSMFAG00000042136-8865.445Macaca_fascicularis
ENSCSAVG00000005966-9588.144ENSMFAG00000002766RPS59390.476Macaca_fascicularis
ENSCSAVG00000005966-9562.755ENSMFAG00000002785-9662.755Macaca_fascicularis
ENSCSAVG00000005966-9562.755ENSMMUG00000042835-9662.755Macaca_mulatta
ENSCSAVG00000005966-10059.330ENSMMUG00000018997-9363.918Macaca_mulatta
ENSCSAVG00000005966-9588.144ENSMMUG00000008729RPS59390.476Macaca_mulatta
ENSCSAVG00000005966-9588.144ENSMNEG00000039816RPS59390.476Macaca_nemestrina
ENSCSAVG00000005966-9677.436ENSMNEG00000042225-9377.436Macaca_nemestrina
ENSCSAVG00000005966-9960.680ENSMNEG00000031381-8665.445Macaca_nemestrina
ENSCSAVG00000005966-10060.287ENSMLEG00000031826-8865.969Mandrillus_leucophaeus
ENSCSAVG00000005966-9667.179ENSMLEG00000035638-9567.179Mandrillus_leucophaeus
ENSCSAVG00000005966-9761.809ENSMLEG00000040248-9661.809Mandrillus_leucophaeus
ENSCSAVG00000005966-9588.144ENSMLEG00000028037RPS59390.476Mandrillus_leucophaeus
ENSCSAVG00000005966-9986.070ENSMAMG00000002747rps59986.070Mastacembelus_armatus
ENSCSAVG00000005966-9986.567ENSMZEG00005026435rps59986.567Maylandia_zebra
ENSCSAVG00000005966-9588.144ENSMAUG00000010731Rps59588.144Mesocricetus_auratus
ENSCSAVG00000005966-9588.144ENSMICG00000016512RPS59390.476Microcebus_murinus
ENSCSAVG00000005966-9588.144ENSMOCG00000022992-9588.144Microtus_ochrogaster
ENSCSAVG00000005966-9370.370ENSMOCG00000017884-10070.370Microtus_ochrogaster
ENSCSAVG00000005966-9985.572ENSMMOG00000014650rps59985.572Mola_mola
ENSCSAVG00000005966-9986.070ENSMALG00000009648rps59986.070Monopterus_albus
ENSCSAVG00000005966-9588.144MGP_CAROLIEiJ_G0029192Rps59588.144Mus_caroli
ENSCSAVG00000005966-9588.144ENSMUSG00000012848Rps59588.144Mus_musculus
ENSCSAVG00000005966-9588.144MGP_PahariEiJ_G0021054Rps59588.144Mus_pahari
ENSCSAVG00000005966-9588.144MGP_SPRETEiJ_G0030268Rps59588.144Mus_spretus
ENSCSAVG00000005966-8290.476ENSMPUG00000008308RPS59990.476Mustela_putorius_furo
ENSCSAVG00000005966-9586.154ENSMLUG00000012641RPS59586.154Myotis_lucifugus
ENSCSAVG00000005966-9588.144ENSNGAG00000015766Rps59588.144Nannospalax_galili
ENSCSAVG00000005966-9986.567ENSNBRG00000018402rps59986.567Neolamprologus_brichardi
ENSCSAVG00000005966-8978.571ENSNLEG00000018478-8878.571Nomascus_leucogenys
ENSCSAVG00000005966-9572.165ENSNLEG00000031782-8972.165Nomascus_leucogenys
ENSCSAVG00000005966-9572.165ENSNLEG00000034160-9572.165Nomascus_leucogenys
ENSCSAVG00000005966-5159.615ENSNLEG00000034909-6259.615Nomascus_leucogenys
ENSCSAVG00000005966-9368.947ENSMEUG00000015400-9968.947Notamacropus_eugenii
ENSCSAVG00000005966-9588.144ENSODEG00000000899-9588.144Octodon_degus
ENSCSAVG00000005966-9476.963ENSODEG00000018813-9476.963Octodon_degus
ENSCSAVG00000005966-9986.567ENSONIG00000019659rps59986.567Oreochromis_niloticus
ENSCSAVG00000005966-8290.476ENSOANG00000011921RPS59990.476Ornithorhynchus_anatinus
ENSCSAVG00000005966-9588.144ENSOCUG00000024505RPS59588.144Oryctolagus_cuniculus
ENSCSAVG00000005966-9986.070ENSORLG00000022059rps59986.070Oryzias_latipes
ENSCSAVG00000005966-9986.070ENSORLG00020008989rps59986.070Oryzias_latipes_hni
ENSCSAVG00000005966-9986.070ENSORLG00015016306rps59986.070Oryzias_latipes_hsok
ENSCSAVG00000005966-9986.567ENSOMEG00000008257rps59986.567Oryzias_melastigma
ENSCSAVG00000005966-9588.144ENSOGAG00000013088RPS59588.144Otolemur_garnettii
ENSCSAVG00000005966-9588.144ENSOARG00000003848RPS59588.144Ovis_aries
ENSCSAVG00000005966-9959.606ENSPPAG00000037379-9959.606Pan_paniscus
ENSCSAVG00000005966-9472.251ENSPPAG00000029021-9672.251Pan_paniscus
ENSCSAVG00000005966-5876.404ENSPPAG00000041919-8976.404Pan_paniscus
ENSCSAVG00000005966-9588.144ENSPPAG00000039568RPS59390.476Pan_paniscus
ENSCSAVG00000005966-9578.866ENSPPAG00000037203-7578.866Pan_paniscus
ENSCSAVG00000005966-9588.144ENSPPRG00000003031RPS59390.476Panthera_pardus
ENSCSAVG00000005966-9588.144ENSPTIG00000019819RPS59390.476Panthera_tigris_altaica
ENSCSAVG00000005966-9588.144ENSPTRG00000011591RPS59390.476Pan_troglodytes
ENSCSAVG00000005966-5876.404ENSPTRG00000045716-8976.404Pan_troglodytes
ENSCSAVG00000005966-9960.099ENSPTRG00000051381-9960.099Pan_troglodytes
ENSCSAVG00000005966-9371.053ENSPTRG00000045137-9671.053Pan_troglodytes
ENSCSAVG00000005966-10071.078ENSPTRG00000049193-10071.078Pan_troglodytes
ENSCSAVG00000005966-9576.804ENSPTRG00000051033-7286.735Pan_troglodytes
ENSCSAVG00000005966-10060.766ENSPANG00000029789-8866.492Papio_anubis
ENSCSAVG00000005966-9284.456ENSPANG00000014392RPS59984.456Papio_anubis
ENSCSAVG00000005966-9986.070ENSPKIG00000011575rps59986.070Paramormyrops_kingsleyae
ENSCSAVG00000005966-9986.567ENSPMGG00000000854rps59788.660Periophthalmus_magnuspinnatus
ENSCSAVG00000005966-9588.144ENSPEMG00000015167Rps59588.144Peromyscus_maniculatus_bairdii
ENSCSAVG00000005966-9588.144ENSPCIG00000026774RPS59588.144Phascolarctos_cinereus
ENSCSAVG00000005966-6269.072ENSPCIG00000022449-9169.072Phascolarctos_cinereus
ENSCSAVG00000005966-9986.567ENSPFOG00000002010rps59986.567Poecilia_formosa
ENSCSAVG00000005966-9986.567ENSPLAG00000009866rps59986.567Poecilia_latipinna
ENSCSAVG00000005966-9986.567ENSPMEG00000005285rps59986.567Poecilia_mexicana
ENSCSAVG00000005966-9986.567ENSPREG00000001896rps58286.567Poecilia_reticulata
ENSCSAVG00000005966-9587.629ENSPPYG00000010500RPS59587.629Pongo_abelii
ENSCSAVG00000005966-9588.144ENSPCAG00000011034RPS59588.144Procavia_capensis
ENSCSAVG00000005966-9588.144ENSPCOG00000016007RPS59390.476Propithecus_coquereli
ENSCSAVG00000005966-9588.144ENSPVAG00000013966RPS59588.144Pteropus_vampyrus
ENSCSAVG00000005966-9986.567ENSPNYG00000016183rps59986.567Pundamilia_nyererei
ENSCSAVG00000005966-9986.070ENSPNAG00000014022rps59986.070Pygocentrus_nattereri
ENSCSAVG00000005966-9588.144ENSRNOG00000019453Rps59588.144Rattus_norvegicus
ENSCSAVG00000005966-9761.809ENSRBIG00000031827-9661.809Rhinopithecus_bieti
ENSCSAVG00000005966-9588.144ENSRBIG00000027783RPS59390.476Rhinopithecus_bieti
ENSCSAVG00000005966-9762.312ENSRROG00000039369-9662.312Rhinopithecus_roxellana
ENSCSAVG00000005966-9588.144ENSRROG00000036995RPS59390.476Rhinopithecus_roxellana
ENSCSAVG00000005966-9862.745YJR123WRPS58367.725Saccharomyces_cerevisiae
ENSCSAVG00000005966-9588.144ENSSBOG00000030947-9390.476Saimiri_boliviensis_boliviensis
ENSCSAVG00000005966-8873.333ENSSBOG00000033455-8982.828Saimiri_boliviensis_boliviensis
ENSCSAVG00000005966-9588.144ENSSHAG00000000092RPS59588.144Sarcophilus_harrisii
ENSCSAVG00000005966-9786.500ENSSFOG00015019773rps59986.500Scleropages_formosus
ENSCSAVG00000005966-9986.070ENSSFOG00015016609rps59986.070Scleropages_formosus
ENSCSAVG00000005966-9985.572ENSSMAG00000020321rps59985.572Scophthalmus_maximus
ENSCSAVG00000005966-9986.070ENSSDUG00000019721rps59986.070Seriola_dumerili
ENSCSAVG00000005966-9955.340ENSSLDG00000006453-9859.686Seriola_lalandi_dorsalis
ENSCSAVG00000005966-9986.070ENSSLDG00000024207rps59986.070Seriola_lalandi_dorsalis
ENSCSAVG00000005966-9588.144ENSSARG00000001506RPS59588.144Sorex_araneus
ENSCSAVG00000005966-9986.070ENSSPUG00000014897RPS59890.476Sphenodon_punctatus
ENSCSAVG00000005966-9968.473ENSSPAG00000005082rps59868.473Stegastes_partitus
ENSCSAVG00000005966-9588.144ENSSSCG00000004002RPS59588.144Sus_scrofa
ENSCSAVG00000005966-5075.728ENSTGUG00000015321-9875.728Taeniopygia_guttata
ENSCSAVG00000005966-9986.070ENSTRUG00000023565rps59986.070Takifugu_rubripes
ENSCSAVG00000005966-7381.757ENSTNIG00000001130rps59981.757Tetraodon_nigroviridis
ENSCSAVG00000005966-8186.061ENSTBEG00000016955RPS59286.061Tupaia_belangeri
ENSCSAVG00000005966-9580.928ENSTTRG00000001991RPS59580.928Tursiops_truncatus
ENSCSAVG00000005966-9588.144ENSUAMG00000019475RPS59588.144Ursus_americanus
ENSCSAVG00000005966-9588.144ENSUMAG00000003934RPS59588.144Ursus_maritimus
ENSCSAVG00000005966-6884.892ENSVPAG00000000903RPS59384.892Vicugna_pacos
ENSCSAVG00000005966-9588.144ENSVVUG00000002269RPS59088.144Vulpes_vulpes
ENSCSAVG00000005966-9985.075ENSXETG00000020355rps59885.075Xenopus_tropicalis
ENSCSAVG00000005966-9986.070ENSXCOG00000019549rps59986.070Xiphophorus_couchianus
ENSCSAVG00000005966-9986.070ENSXMAG00000014201rps59986.070Xiphophorus_maculatus

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