EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006009 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1224 bases
Position: chrreftig_166:184701-185924
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010180	Nop53	PF07767.11	6.2e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010304	-	1224	-	ENSCSAVP00000010180	407 (aa)	-	H2YXW9

Gene Model

Click here to download ENSCSAVG00000006009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006009	-	95	35.581	ENSG00000105373	NOP53	72	64.865	Homo_sapiens
ENSCSAVG00000006009	-	95	33.489	ENSAPOG00000006446	nop53	89	33.724	Acanthochromis_polyacanthus
ENSCSAVG00000006009	-	95	35.333	ENSAMEG00000015214	NOP53	88	35.281	Ailuropoda_melanoleuca
ENSCSAVG00000006009	-	68	39.085	ENSACIG00000002467	nop53	77	37.589	Amphilophus_citrinellus
ENSCSAVG00000006009	-	95	33.099	ENSAOCG00000007002	nop53	89	33.333	Amphiprion_ocellaris
ENSCSAVG00000006009	-	95	33.255	ENSAPEG00000024564	nop53	89	33.489	Amphiprion_percula
ENSCSAVG00000006009	-	92	33.976	ENSATEG00000021860	nop53	89	33.415	Anabas_testudineus
ENSCSAVG00000006009	-	61	37.175	ENSACAG00000011362	-	89	37.175	Anolis_carolinensis
ENSCSAVG00000006009	-	99	31.929	ENSANAG00000007933	NOP53	92	32.483	Aotus_nancymaae
ENSCSAVG00000006009	-	95	35.035	ENSACLG00000011832	nop53	89	34.732	Astatotilapia_calliptera
ENSCSAVG00000006009	-	95	35.831	ENSAMXG00000014883	nop53	89	35.681	Astyanax_mexicanus
ENSCSAVG00000006009	-	95	35.281	ENSBTAG00000021192	NOP53	80	34.831	Bos_taurus
ENSCSAVG00000006009	-	95	34.018	ENSCJAG00000011385	NOP53	88	34.247	Callithrix_jacchus
ENSCSAVG00000006009	-	95	35.666	ENSCAFG00000004080	NOP53	88	36.092	Canis_familiaris
ENSCSAVG00000006009	-	95	35.011	ENSCHIG00000009393	NOP53	88	34.554	Capra_hircus
ENSCSAVG00000006009	-	95	34.353	ENSTSYG00000036631	NOP53	87	33.017	Carlito_syrichta
ENSCSAVG00000006009	-	89	35.309	ENSCAPG00000013148	NOP53	100	35.062	Cavia_aperea
ENSCSAVG00000006009	-	95	35.664	ENSCPOG00000015665	NOP53	88	35.198	Cavia_porcellus
ENSCSAVG00000006009	-	95	33.180	ENSCCAG00000025477	NOP53	88	34.562	Cebus_capucinus
ENSCSAVG00000006009	-	95	35.814	ENSCATG00000032842	NOP53	88	35.814	Cercocebus_atys
ENSCSAVG00000006009	-	95	33.333	ENSCLAG00000001860	NOP53	88	33.105	Chinchilla_lanigera
ENSCSAVG00000006009	-	95	34.651	ENSCSAG00000002928	NOP53	88	35.581	Chlorocebus_sabaeus
ENSCSAVG00000006009	-	91	32.367	ENSCPBG00000009047	NOP53	95	32.603	Chrysemys_picta_bellii
ENSCSAVG00000006009	-	96	68.702	ENSCING00000021395	-	97	69.211	Ciona_intestinalis
ENSCSAVG00000006009	-	95	34.940	ENSCANG00000039648	NOP53	87	35.904	Colobus_angolensis_palliatus
ENSCSAVG00000006009	-	95	34.286	ENSCGRG00001019033	Nop53	88	34.899	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006009	-	95	33.333	ENSCSEG00000014834	nop53	90	32.488	Cynoglossus_semilaevis
ENSCSAVG00000006009	-	95	33.486	ENSCVAG00000005940	nop53	89	33.871	Cyprinodon_variegatus
ENSCSAVG00000006009	-	96	34.742	ENSDARG00000100452	nop53	100	40.984	Danio_rerio
ENSCSAVG00000006009	-	95	34.783	ENSDNOG00000005165	NOP53	80	35.023	Dasypus_novemcinctus
ENSCSAVG00000006009	-	100	38.673	ENSEBUG00000012747	nop53	89	37.857	Eptatretus_burgeri
ENSCSAVG00000006009	-	99	35.604	ENSEASG00005004345	NOP53	84	36.468	Equus_asinus_asinus
ENSCSAVG00000006009	-	99	35.435	ENSECAG00000026850	NOP53	84	35.763	Equus_caballus
ENSCSAVG00000006009	-	85	67.647	ENSEEUG00000005287	NOP53	68	67.647	Erinaceus_europaeus
ENSCSAVG00000006009	-	95	32.941	ENSELUG00000001525	nop53	90	33.255	Esox_lucius
ENSCSAVG00000006009	-	95	35.520	ENSFCAG00000010861	NOP53	88	35.520	Felis_catus
ENSCSAVG00000006009	-	95	33.806	ENSFDAG00000010478	NOP53	86	32.471	Fukomys_damarensis
ENSCSAVG00000006009	-	95	34.339	ENSFHEG00000017763	nop53	87	33.879	Fundulus_heteroclitus
ENSCSAVG00000006009	-	96	33.813	ENSGMOG00000014299	nop53	89	33.735	Gadus_morhua
ENSCSAVG00000006009	-	97	32.184	ENSGAFG00000013301	nop53	89	31.529	Gambusia_affinis
ENSCSAVG00000006009	-	95	34.742	ENSGACG00000005766	nop53	89	34.038	Gasterosteus_aculeatus
ENSCSAVG00000006009	-	95	34.906	ENSGGOG00000005462	NOP53	88	35.849	Gorilla_gorilla
ENSCSAVG00000006009	-	95	32.067	ENSGGOG00000024728	-	87	33.492	Gorilla_gorilla
ENSCSAVG00000006009	-	95	34.732	ENSHBUG00000023625	nop53	89	34.732	Haplochromis_burtoni
ENSCSAVG00000006009	-	95	33.634	ENSHGLG00000018240	NOP53	88	34.253	Heterocephalus_glaber_female
ENSCSAVG00000006009	-	72	44.615	ENSHGLG00100015613	NOP53	71	64.474	Heterocephalus_glaber_male
ENSCSAVG00000006009	-	95	32.805	ENSHCOG00000017133	nop53	90	33.710	Hippocampus_comes
ENSCSAVG00000006009	-	96	35.529	ENSIPUG00000008154	nop53	79	35.225	Ictalurus_punctatus
ENSCSAVG00000006009	-	95	33.864	ENSSTOG00000022092	NOP53	88	34.554	Ictidomys_tridecemlineatus
ENSCSAVG00000006009	-	95	33.038	ENSJJAG00000007854	Nop53	88	34.483	Jaculus_jaculus
ENSCSAVG00000006009	-	91	33.252	ENSKMAG00000020756	nop53	89	33.252	Kryptolebias_marmoratus
ENSCSAVG00000006009	-	95	32.787	ENSLBEG00000011432	nop53	89	32.319	Labrus_bergylta
ENSCSAVG00000006009	-	91	36.145	ENSLACG00000018320	NOP53	100	35.437	Latimeria_chalumnae
ENSCSAVG00000006009	-	97	33.800	ENSLOCG00000014178	nop53	89	33.178	Lepisosteus_oculatus
ENSCSAVG00000006009	-	95	34.793	ENSMFAG00000045103	NOP53	88	35.023	Macaca_fascicularis
ENSCSAVG00000006009	-	95	34.332	ENSMMUG00000013348	NOP53	85	35.253	Macaca_mulatta
ENSCSAVG00000006009	-	95	34.332	ENSMNEG00000042540	NOP53	85	35.023	Macaca_nemestrina
ENSCSAVG00000006009	-	95	31.354	ENSMLEG00000032475	NOP53	88	30.254	Mandrillus_leucophaeus
ENSCSAVG00000006009	-	95	34.332	ENSMAMG00000012652	nop53	90	34.174	Mastacembelus_armatus
ENSCSAVG00000006009	-	95	34.689	ENSMZEG00005005033	nop53	88	34.135	Maylandia_zebra
ENSCSAVG00000006009	-	95	35.267	ENSMAUG00000012617	Nop53	88	35.035	Mesocricetus_auratus
ENSCSAVG00000006009	-	98	34.452	ENSMICG00000005580	NOP53	93	34.571	Microcebus_murinus
ENSCSAVG00000006009	-	95	34.703	ENSMOCG00000008367	Nop53	88	35.349	Microtus_ochrogaster
ENSCSAVG00000006009	-	95	33.412	ENSMMOG00000006515	nop53	89	33.890	Mola_mola
ENSCSAVG00000006009	-	95	31.787	ENSMODG00000008721	NOP53	81	32.319	Monodelphis_domestica
ENSCSAVG00000006009	-	95	34.038	ENSMALG00000020350	nop53	85	34.670	Monopterus_albus
ENSCSAVG00000006009	-	95	33.557	MGP_CAROLIEiJ_G0029218	Nop53	100	37.629	Mus_caroli
ENSCSAVG00000006009	-	95	33.557	ENSMUSG00000041560	Nop53	88	33.409	Mus_musculus
ENSCSAVG00000006009	-	92	33.484	MGP_PahariEiJ_G0021074	-	100	37.629	Mus_pahari
ENSCSAVG00000006009	-	95	34.004	MGP_SPRETEiJ_G0030298	Nop53	100	38.144	Mus_spretus
ENSCSAVG00000006009	-	95	36.219	ENSMPUG00000004456	NOP53	88	36.219	Mustela_putorius_furo
ENSCSAVG00000006009	-	61	39.007	ENSMLUG00000027066	-	100	39.781	Myotis_lucifugus
ENSCSAVG00000006009	-	99	35.000	ENSNGAG00000019894	Nop53	88	34.989	Nannospalax_galili
ENSCSAVG00000006009	-	90	33.586	ENSNBRG00000002057	nop53	82	33.081	Neolamprologus_brichardi
ENSCSAVG00000006009	-	95	35.116	ENSNLEG00000003143	NOP53	88	36.047	Nomascus_leucogenys
ENSCSAVG00000006009	-	95	32.584	ENSODEG00000006707	NOP53	88	32.353	Octodon_degus
ENSCSAVG00000006009	-	95	35.880	ENSONIG00000016624	nop53	89	35.349	Oreochromis_niloticus
ENSCSAVG00000006009	-	95	32.048	ENSORLG00000008659	nop53	89	32.530	Oryzias_latipes
ENSCSAVG00000006009	-	98	31.981	ENSORLG00020019916	nop53	88	31.894	Oryzias_latipes_hni
ENSCSAVG00000006009	-	95	31.850	ENSORLG00015001315	nop53	89	33.021	Oryzias_latipes_hsok
ENSCSAVG00000006009	-	97	33.793	ENSOMEG00000018244	nop53	89	33.179	Oryzias_melastigma
ENSCSAVG00000006009	-	88	64.789	ENSOGAG00000024300	NOP53	72	64.789	Otolemur_garnettii
ENSCSAVG00000006009	-	95	34.813	ENSPPAG00000002927	-	88	35.748	Pan_paniscus
ENSCSAVG00000006009	-	99	30.926	ENSPPAG00000029337	-	87	31.368	Pan_paniscus
ENSCSAVG00000006009	-	95	33.014	ENSPPAG00000032995	-	86	33.732	Pan_paniscus
ENSCSAVG00000006009	-	95	35.227	ENSPPRG00000008954	NOP53	88	35.227	Panthera_pardus
ENSCSAVG00000006009	-	99	30.700	ENSPTRG00000052493	-	87	30.806	Pan_troglodytes
ENSCSAVG00000006009	-	95	35.349	ENSPTRG00000011215	NOP53	88	36.279	Pan_troglodytes
ENSCSAVG00000006009	-	95	32.558	ENSPTRG00000043520	-	88	33.488	Pan_troglodytes
ENSCSAVG00000006009	-	95	35.349	ENSPANG00000002964	NOP53	88	36.279	Papio_anubis
ENSCSAVG00000006009	-	95	36.085	ENSPKIG00000000127	nop53	89	36.321	Paramormyrops_kingsleyae
ENSCSAVG00000006009	-	95	34.803	ENSPMGG00000021579	nop53	89	35.294	Periophthalmus_magnuspinnatus
ENSCSAVG00000006009	-	95	34.298	ENSPEMG00000006856	Nop53	88	34.694	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006009	-	98	31.685	ENSPCIG00000016718	NOP53	89	31.702	Phascolarctos_cinereus
ENSCSAVG00000006009	-	95	33.333	ENSPFOG00000002839	nop53	89	32.874	Poecilia_formosa
ENSCSAVG00000006009	-	53	30.242	ENSPLAG00000009285	-	73	30.242	Poecilia_latipinna
ENSCSAVG00000006009	-	95	33.333	ENSPLAG00000006675	nop53	89	32.874	Poecilia_latipinna
ENSCSAVG00000006009	-	95	32.564	ENSPMEG00000009589	nop53	89	32.794	Poecilia_mexicana
ENSCSAVG00000006009	-	53	30.242	ENSPMEG00000006978	nop53	73	30.242	Poecilia_mexicana
ENSCSAVG00000006009	-	95	35.831	ENSPPYG00000010181	NOP53	87	36.768	Pongo_abelii
ENSCSAVG00000006009	-	82	35.171	ENSPCAG00000007692	NOP53	77	35.925	Procavia_capensis
ENSCSAVG00000006009	-	95	33.175	ENSPCOG00000016124	NOP53	86	32.000	Propithecus_coquereli
ENSCSAVG00000006009	-	60	37.770	ENSPVAG00000014671	NOP53	54	38.519	Pteropus_vampyrus
ENSCSAVG00000006009	-	95	35.035	ENSPNYG00000001341	nop53	89	34.965	Pundamilia_nyererei
ENSCSAVG00000006009	-	95	34.043	ENSPNAG00000012520	nop53	89	33.570	Pygocentrus_nattereri
ENSCSAVG00000006009	-	95	34.298	ENSRNOG00000013023	Nop53	88	35.011	Rattus_norvegicus
ENSCSAVG00000006009	-	95	34.404	ENSRBIG00000036427	NOP53	88	35.321	Rhinopithecus_bieti
ENSCSAVG00000006009	-	95	33.871	ENSRROG00000042298	NOP53	88	34.793	Rhinopithecus_roxellana
ENSCSAVG00000006009	-	95	35.023	ENSSBOG00000033115	NOP53	88	35.484	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006009	-	91	32.143	ENSSHAG00000002239	NOP53	100	31.517	Sarcophilus_harrisii
ENSCSAVG00000006009	-	95	33.563	ENSSFOG00015007062	gltscr2	89	34.507	Scleropages_formosus
ENSCSAVG00000006009	-	95	34.192	ENSSMAG00000000212	nop53	90	33.800	Scophthalmus_maximus
ENSCSAVG00000006009	-	95	34.824	ENSSDUG00000010575	nop53	89	34.752	Seriola_dumerili
ENSCSAVG00000006009	-	95	33.967	ENSSLDG00000000140	nop53	86	33.652	Seriola_lalandi_dorsalis
ENSCSAVG00000006009	-	77	34.195	ENSSARG00000014109	NOP53	71	33.811	Sorex_araneus
ENSCSAVG00000006009	-	84	31.608	ENSSPUG00000004420	NOP53	81	31.608	Sphenodon_punctatus
ENSCSAVG00000006009	-	95	34.028	ENSSPAG00000000318	nop53	89	33.953	Stegastes_partitus
ENSCSAVG00000006009	-	95	34.660	ENSSSCG00000022774	NOP53	88	35.084	Sus_scrofa
ENSCSAVG00000006009	-	97	35.172	ENSTRUG00000004944	nop53	89	35.116	Takifugu_rubripes
ENSCSAVG00000006009	-	95	34.000	ENSTTRG00000011831	NOP53	88	34.615	Tursiops_truncatus
ENSCSAVG00000006009	-	95	35.963	ENSUAMG00000028254	NOP53	88	35.963	Ursus_americanus
ENSCSAVG00000006009	-	71	31.737	ENSVVUG00000023365	NOP53	66	31.737	Vulpes_vulpes
ENSCSAVG00000006009	-	79	57.303	ENSXETG00000002782	nop53	90	34.198	Xenopus_tropicalis
ENSCSAVG00000006009	-	95	34.615	ENSXCOG00000004436	nop53	89	33.894	Xiphophorus_couchianus
ENSCSAVG00000006009	-	95	33.875	ENSXMAG00000002589	nop53	89	33.179	Xiphophorus_maculatus