EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSCSAVG00000006028 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3053 bases
Position: chrreftig_0:411767-414819
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010229	zf-C2H2	PF00096.26	7.2e-15	1	2
ENSCSAVP00000010229	zf-C2H2	PF00096.26	7.2e-15	2	2
ENSCSAVP00000010229	zf-met	PF12874.7	3.2e-10	1	2
ENSCSAVP00000010229	zf-met	PF12874.7	3.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010354	-	790	-	ENSCSAVP00000010229	198 (aa)	-	H2YY18

Gene Model

Click here to download ENSCSAVG00000006028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000006028	-	57	41.111	ENSCSAVG00000000520	-	100	41.111
ENSCSAVG00000006028	-	95	41.667	ENSCSAVG00000008862	-	99	43.617
ENSCSAVG00000006028	-	71	41.053	ENSCSAVG00000000293	-	100	41.053
ENSCSAVG00000006028	-	79	40.625	ENSCSAVG00000000642	-	99	43.056
ENSCSAVG00000006028	-	64	41.489	ENSCSAVG00000001808	-	99	41.489
ENSCSAVG00000006028	-	78	40.426	ENSCSAVG00000009583	-	99	40.426
ENSCSAVG00000006028	-	69	42.105	ENSCSAVG00000000649	-	97	42.105
ENSCSAVG00000006028	-	85	39.062	ENSCSAVG00000006608	-	99	43.678
ENSCSAVG00000006028	-	69	42.708	ENSCSAVG00000004703	-	99	43.158
ENSCSAVG00000006028	-	89	41.304	ENSCSAVG00000004499	-	99	42.553
ENSCSAVG00000006028	-	85	41.489	ENSCSAVG00000007918	-	100	41.489
ENSCSAVG00000006028	-	63	44.330	ENSCSAVG00000010960	-	99	44.330
ENSCSAVG00000006028	-	99	43.011	ENSCSAVG00000001989	-	100	43.011
ENSCSAVG00000006028	-	71	36.719	ENSCSAVG00000004762	-	97	36.719
ENSCSAVG00000006028	-	69	42.553	ENSCSAVG00000006141	-	99	43.478
ENSCSAVG00000006028	-	71	39.623	ENSCSAVG00000009574	-	100	39.623
ENSCSAVG00000006028	-	50	39.726	ENSCSAVG00000009819	-	67	39.726
ENSCSAVG00000006028	-	64	36.082	ENSCSAVG00000009217	-	81	36.082
ENSCSAVG00000006028	-	51	40.000	ENSCSAVG00000003895	-	98	40.000
ENSCSAVG00000006028	-	56	38.806	ENSCSAVG00000004543	-	99	40.000
ENSCSAVG00000006028	-	89	41.053	ENSCSAVG00000007589	-	99	41.053
ENSCSAVG00000006028	-	51	43.137	ENSCSAVG00000005904	-	99	43.137
ENSCSAVG00000006028	-	68	44.681	ENSCSAVG00000009953	-	98	44.681
ENSCSAVG00000006028	-	85	42.466	ENSCSAVG00000001834	-	100	42.466
ENSCSAVG00000006028	-	66	40.426	ENSCSAVG00000006650	-	99	40.426
ENSCSAVG00000006028	-	50	34.615	ENSCSAVG00000011749	-	74	34.615
ENSCSAVG00000006028	-	70	40.449	ENSCSAVG00000000690	-	99	38.947
ENSCSAVG00000006028	-	57	34.314	ENSCSAVG00000005896	-	53	34.314
ENSCSAVG00000006028	-	85	42.029	ENSCSAVG00000000673	-	99	43.478
ENSCSAVG00000006028	-	85	42.105	ENSCSAVG00000000655	-	100	42.105
ENSCSAVG00000006028	-	63	35.789	ENSCSAVG00000006745	-	80	35.789
ENSCSAVG00000006028	-	51	36.735	ENSCSAVG00000006729	-	52	36.735
ENSCSAVG00000006028	-	63	40.217	ENSCSAVG00000004678	-	99	40.217
ENSCSAVG00000006028	-	54	38.158	ENSCSAVG00000009739	-	56	38.158
ENSCSAVG00000006028	-	54	41.053	ENSCSAVG00000002179	-	99	41.053