EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006052 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4639 bases
Position: chrreftig_19:368724-373362
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010265	Exo_endo_phos	PF03372.23	4.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010390	-	1416	-	ENSCSAVP00000010265	472 (aa)	-	H2YY54

Gene Model

Click here to download ENSCSAVG00000006052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006052's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006052	-	99	38.390	ENSG00000169188	APEX2	99	38.390	Homo_sapiens
ENSCSAVG00000006052	-	90	60.317	ENSAPOG00000005805	apex2	75	60.317	Acanthochromis_polyacanthus
ENSCSAVG00000006052	-	99	38.879	ENSAMEG00000003608	APEX2	99	38.879	Ailuropoda_melanoleuca
ENSCSAVG00000006052	-	99	47.487	ENSACIG00000010000	apex2	84	47.487	Amphilophus_citrinellus
ENSCSAVG00000006052	-	94	49.725	ENSAOCG00000021774	apex2	79	49.725	Amphiprion_ocellaris
ENSCSAVG00000006052	-	94	49.451	ENSAPEG00000020890	apex2	74	49.451	Amphiprion_percula
ENSCSAVG00000006052	-	95	49.591	ENSATEG00000023600	apex2	78	50.136	Anabas_testudineus
ENSCSAVG00000006052	-	100	41.571	ENSACAG00000011201	APEX2	99	41.762	Anolis_carolinensis
ENSCSAVG00000006052	-	97	33.592	ENSANAG00000020845	-	99	33.592	Aotus_nancymaae
ENSCSAVG00000006052	-	99	38.202	ENSANAG00000021907	-	99	38.202	Aotus_nancymaae
ENSCSAVG00000006052	-	88	54.545	ENSAMXG00000007422	apex2	75	54.545	Astyanax_mexicanus
ENSCSAVG00000006052	-	99	39.811	ENSBTAG00000013177	APEX2	99	39.811	Bos_taurus
ENSCSAVG00000006052	-	99	38.390	ENSCJAG00000016584	APEX2	99	38.390	Callithrix_jacchus
ENSCSAVG00000006052	-	99	38.577	ENSCAFG00000014310	APEX2	99	38.577	Canis_familiaris
ENSCSAVG00000006052	-	99	39.139	ENSCAFG00020013818	APEX2	99	39.139	Canis_lupus_dingo
ENSCSAVG00000006052	-	99	39.434	ENSCHIG00000019916	APEX2	99	39.434	Capra_hircus
ENSCSAVG00000006052	-	99	38.941	ENSTSYG00000005612	APEX2	99	38.941	Carlito_syrichta
ENSCSAVG00000006052	-	99	38.679	ENSCPOG00000007265	APEX2	99	38.868	Cavia_porcellus
ENSCSAVG00000006052	-	96	35.654	ENSCCAG00000025405	-	97	35.654	Cebus_capucinus
ENSCSAVG00000006052	-	99	38.015	ENSCATG00000044854	APEX2	99	38.015	Cercocebus_atys
ENSCSAVG00000006052	-	99	38.577	ENSCLAG00000017315	APEX2	99	38.577	Chinchilla_lanigera
ENSCSAVG00000006052	-	99	38.577	ENSCSAG00000012124	APEX2	99	38.577	Chlorocebus_sabaeus
ENSCSAVG00000006052	-	100	40.524	ENSCPBG00000016631	APEX2	99	40.927	Chrysemys_picta_bellii
ENSCSAVG00000006052	-	99	38.577	ENSCANG00000003053	APEX2	99	38.577	Colobus_angolensis_palliatus
ENSCSAVG00000006052	-	99	39.626	ENSCGRG00001008132	Apex2	99	39.626	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006052	-	99	39.626	ENSCGRG00000009667	Apex2	99	39.626	Cricetulus_griseus_crigri
ENSCSAVG00000006052	-	100	46.633	ENSCSEG00000019900	apex2	84	46.633	Cynoglossus_semilaevis
ENSCSAVG00000006052	-	95	50.681	ENSCVAG00000021583	apex2	80	49.474	Cyprinodon_variegatus
ENSCSAVG00000006052	-	97	56.757	ENSDARG00000008472	apex2	85	56.757	Danio_rerio
ENSCSAVG00000006052	-	99	38.722	ENSDNOG00000038901	APEX2	99	38.722	Dasypus_novemcinctus
ENSCSAVG00000006052	-	100	43.227	ENSEBUG00000015654	apex2	100	43.426	Eptatretus_burgeri
ENSCSAVG00000006052	-	99	39.925	ENSEASG00005011694	APEX2	91	39.925	Equus_asinus_asinus
ENSCSAVG00000006052	-	99	39.925	ENSECAG00000026921	APEX2	91	39.925	Equus_caballus
ENSCSAVG00000006052	-	99	38.667	ENSEEUG00000013172	APEX2	99	38.667	Erinaceus_europaeus
ENSCSAVG00000006052	-	89	57.143	ENSELUG00000021417	apex2	72	57.143	Esox_lucius
ENSCSAVG00000006052	-	99	38.230	ENSFCAG00000021990	APEX2	99	38.230	Felis_catus
ENSCSAVG00000006052	-	99	39.700	ENSFDAG00000008076	APEX2	96	45.455	Fukomys_damarensis
ENSCSAVG00000006052	-	95	47.727	ENSFHEG00000021411	apex2	80	47.727	Fundulus_heteroclitus
ENSCSAVG00000006052	-	58	57.143	ENSGMOG00000019681	apex2	77	57.143	Gadus_morhua
ENSCSAVG00000006052	-	100	46.914	ENSGAFG00000005829	apex2	87	53.968	Gambusia_affinis
ENSCSAVG00000006052	-	54	56.354	ENSGACG00000012307	apex2	67	56.164	Gasterosteus_aculeatus
ENSCSAVG00000006052	-	88	35.608	ENSGAGG00000011520	APEX2	87	35.608	Gopherus_agassizii
ENSCSAVG00000006052	-	99	38.202	ENSGGOG00000002056	APEX2	99	38.202	Gorilla_gorilla
ENSCSAVG00000006052	-	100	43.797	ENSHBUG00000009938	apex2	99	44.278	Haplochromis_burtoni
ENSCSAVG00000006052	-	99	38.837	ENSHGLG00000000273	APEX2	98	45.299	Heterocephalus_glaber_female
ENSCSAVG00000006052	-	100	44.383	ENSHCOG00000010165	apex2	99	44.383	Hippocampus_comes
ENSCSAVG00000006052	-	91	50.975	ENSIPUG00000000352	APEX2	73	50.975	Ictalurus_punctatus
ENSCSAVG00000006052	-	99	40.075	ENSSTOG00000025121	APEX2	99	39.851	Ictidomys_tridecemlineatus
ENSCSAVG00000006052	-	99	38.390	ENSJJAG00000019611	Apex2	93	47.706	Jaculus_jaculus
ENSCSAVG00000006052	-	100	46.247	ENSKMAG00000006985	apex2	91	46.731	Kryptolebias_marmoratus
ENSCSAVG00000006052	-	95	51.233	ENSLBEG00000012139	apex2	79	51.233	Labrus_bergylta
ENSCSAVG00000006052	-	100	41.373	ENSLACG00000000865	APEX2	99	41.621	Latimeria_chalumnae
ENSCSAVG00000006052	-	88	55.224	ENSLOCG00000014467	apex2	73	55.224	Lepisosteus_oculatus
ENSCSAVG00000006052	-	99	39.623	ENSLAFG00000018312	APEX2	99	39.623	Loxodonta_africana
ENSCSAVG00000006052	-	99	38.390	ENSMFAG00000002486	APEX2	99	38.390	Macaca_fascicularis
ENSCSAVG00000006052	-	99	38.202	ENSMMUG00000008428	APEX2	99	38.202	Macaca_mulatta
ENSCSAVG00000006052	-	99	38.692	ENSMNEG00000036783	APEX2	99	38.692	Macaca_nemestrina
ENSCSAVG00000006052	-	99	38.015	ENSMLEG00000028208	APEX2	99	38.015	Mandrillus_leucophaeus
ENSCSAVG00000006052	-	94	49.425	ENSMAMG00000024220	apex2	76	49.425	Mastacembelus_armatus
ENSCSAVG00000006052	-	100	43.797	ENSMZEG00005026322	apex2	99	44.278	Maylandia_zebra
ENSCSAVG00000006052	-	99	36.891	ENSMICG00000043181	APEX2	99	36.891	Microcebus_murinus
ENSCSAVG00000006052	-	99	39.736	ENSMOCG00000004339	Apex2	99	40.301	Microtus_ochrogaster
ENSCSAVG00000006052	-	100	47.382	ENSMMOG00000017340	apex2	90	45.205	Mola_mola
ENSCSAVG00000006052	-	99	45.473	ENSMODG00000005341	APEX2	99	45.473	Monodelphis_domestica
ENSCSAVG00000006052	-	95	49.176	ENSMALG00000014179	apex2	79	48.177	Monopterus_albus
ENSCSAVG00000006052	-	99	39.962	MGP_CAROLIEiJ_G0033484	Apex2	99	45.552	Mus_caroli
ENSCSAVG00000006052	-	99	39.962	ENSMUSG00000025269	Apex2	99	45.552	Mus_musculus
ENSCSAVG00000006052	-	99	39.962	MGP_PahariEiJ_G0032023	Apex2	99	45.552	Mus_pahari
ENSCSAVG00000006052	-	99	39.775	MGP_SPRETEiJ_G0034654	Apex2	99	45.552	Mus_spretus
ENSCSAVG00000006052	-	99	39.700	ENSMPUG00000003293	APEX2	99	39.700	Mustela_putorius_furo
ENSCSAVG00000006052	-	99	38.432	ENSMLUG00000004562	-	99	38.432	Myotis_lucifugus
ENSCSAVG00000006052	-	99	39.245	ENSMLUG00000016298	-	99	39.245	Myotis_lucifugus
ENSCSAVG00000006052	-	99	39.024	ENSNGAG00000013576	Apex2	99	39.024	Nannospalax_galili
ENSCSAVG00000006052	-	95	50.820	ENSNBRG00000010099	apex2	84	48.615	Neolamprologus_brichardi
ENSCSAVG00000006052	-	99	36.196	ENSNLEG00000032067	-	99	36.196	Nomascus_leucogenys
ENSCSAVG00000006052	-	95	50.546	ENSONIG00000016881	apex2	99	43.284	Oreochromis_niloticus
ENSCSAVG00000006052	-	92	41.752	ENSOANG00000000689	-	96	41.752	Ornithorhynchus_anatinus
ENSCSAVG00000006052	-	99	33.708	ENSOCUG00000000570	APEX2	99	33.708	Oryctolagus_cuniculus
ENSCSAVG00000006052	-	90	61.905	ENSORLG00000014053	apex2	76	61.905	Oryzias_latipes
ENSCSAVG00000006052	-	90	60.317	ENSORLG00020013253	apex2	76	60.317	Oryzias_latipes_hni
ENSCSAVG00000006052	-	90	61.905	ENSORLG00015007515	apex2	76	61.905	Oryzias_latipes_hsok
ENSCSAVG00000006052	-	91	59.091	ENSOMEG00000003655	apex2	77	59.091	Oryzias_melastigma
ENSCSAVG00000006052	-	99	38.879	ENSOGAG00000007797	APEX2	99	38.879	Otolemur_garnettii
ENSCSAVG00000006052	-	99	39.434	ENSOARG00000005742	APEX2	99	39.434	Ovis_aries
ENSCSAVG00000006052	-	99	38.390	ENSPPAG00000035747	APEX2	99	38.390	Pan_paniscus
ENSCSAVG00000006052	-	99	37.925	ENSPPRG00000002440	APEX2	99	37.925	Panthera_pardus
ENSCSAVG00000006052	-	99	37.736	ENSPTIG00000021651	APEX2	99	37.736	Panthera_tigris_altaica
ENSCSAVG00000006052	-	99	38.390	ENSPTRG00000021946	APEX2	99	38.390	Pan_troglodytes
ENSCSAVG00000006052	-	99	38.015	ENSPANG00000003595	APEX2	99	38.015	Papio_anubis
ENSCSAVG00000006052	-	87	58.730	ENSPKIG00000007752	apex2	73	58.730	Paramormyrops_kingsleyae
ENSCSAVG00000006052	-	99	51.852	ENSPMGG00000009151	apex2	84	51.852	Periophthalmus_magnuspinnatus
ENSCSAVG00000006052	-	99	39.700	ENSPEMG00000016475	Apex2	99	39.700	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006052	-	99	45.783	ENSPCIG00000007633	APEX2	98	45.783	Phascolarctos_cinereus
ENSCSAVG00000006052	-	93	57.143	ENSPFOG00000000408	apex2	82	57.143	Poecilia_formosa
ENSCSAVG00000006052	-	93	57.143	ENSPLAG00000023814	apex2	79	57.143	Poecilia_latipinna
ENSCSAVG00000006052	-	93	57.143	ENSPMEG00000023222	apex2	82	57.143	Poecilia_mexicana
ENSCSAVG00000006052	-	99	38.202	ENSPPYG00000020388	APEX2	99	38.202	Pongo_abelii
ENSCSAVG00000006052	-	99	38.764	ENSPCOG00000016083	APEX2	99	38.764	Propithecus_coquereli
ENSCSAVG00000006052	-	91	39.413	ENSPVAG00000007851	APEX2	99	39.413	Pteropus_vampyrus
ENSCSAVG00000006052	-	93	50.546	ENSPNYG00000015698	apex2	83	48.718	Pundamilia_nyererei
ENSCSAVG00000006052	-	87	62.500	ENSPNAG00000011666	apex2	69	62.500	Pygocentrus_nattereri
ENSCSAVG00000006052	-	99	41.431	ENSRNOG00000000166	Apex2	99	41.431	Rattus_norvegicus
ENSCSAVG00000006052	-	99	38.577	ENSRBIG00000036500	APEX2	99	38.577	Rhinopithecus_bieti
ENSCSAVG00000006052	-	99	38.390	ENSRROG00000032674	APEX2	99	38.390	Rhinopithecus_roxellana
ENSCSAVG00000006052	-	96	32.371	ENSSBOG00000003489	-	96	32.371	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006052	-	99	38.764	ENSSBOG00000030500	-	99	38.577	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006052	-	99	44.779	ENSSHAG00000007846	APEX2	99	44.779	Sarcophilus_harrisii
ENSCSAVG00000006052	-	87	58.730	ENSSFOG00015010354	apex2	99	44.894	Scleropages_formosus
ENSCSAVG00000006052	-	89	55.714	ENSSMAG00000012753	apex2	85	55.714	Scophthalmus_maximus
ENSCSAVG00000006052	-	93	54.430	ENSSDUG00000022892	apex2	79	54.430	Seriola_dumerili
ENSCSAVG00000006052	-	95	49.587	ENSSLDG00000024347	apex2	99	44.068	Seriola_lalandi_dorsalis
ENSCSAVG00000006052	-	99	38.837	ENSSARG00000010297	APEX2	99	38.837	Sorex_araneus
ENSCSAVG00000006052	-	100	49.725	ENSSPAG00000016279	apex2	86	49.725	Stegastes_partitus
ENSCSAVG00000006052	-	99	39.587	ENSSSCG00000012348	-	99	39.587	Sus_scrofa
ENSCSAVG00000006052	-	100	54.667	ENSTRUG00000015660	apex2	87	54.667	Takifugu_rubripes
ENSCSAVG00000006052	-	82	57.576	ENSTNIG00000003725	apex2	99	42.254	Tetraodon_nigroviridis
ENSCSAVG00000006052	-	91	37.759	ENSTBEG00000010520	APEX2	99	37.759	Tupaia_belangeri
ENSCSAVG00000006052	-	99	40.075	ENSUAMG00000004720	APEX2	93	46.320	Ursus_americanus
ENSCSAVG00000006052	-	99	37.453	ENSUMAG00000002892	APEX2	99	37.828	Ursus_maritimus
ENSCSAVG00000006052	-	99	39.139	ENSVVUG00000005989	APEX2	99	39.139	Vulpes_vulpes
ENSCSAVG00000006052	-	100	44.231	ENSXETG00000022026	apex2	99	44.231	Xenopus_tropicalis
ENSCSAVG00000006052	-	93	55.556	ENSXMAG00000025740	apex2	82	55.556	Xiphophorus_maculatus