EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006059 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2493 bases
Position: chrreftig_54:433329-435821
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010276	NUC173	PF08161.12	6.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010401	-	2445	-	ENSCSAVP00000010276	814 (aa)	-	H2YY65

Gene Model

Click here to download ENSCSAVG00000006059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006059	-	99	38.740	ENSG00000052749	RRP12	69	38.921	Homo_sapiens
ENSCSAVG00000006059	-	98	39.471	ENSAPOG00000013355	rrp12	63	39.405	Acanthochromis_polyacanthus
ENSCSAVG00000006059	-	99	38.811	ENSAMEG00000000134	RRP12	64	39.110	Ailuropoda_melanoleuca
ENSCSAVG00000006059	-	98	41.148	ENSACIG00000022673	rrp12	63	41.183	Amphilophus_citrinellus
ENSCSAVG00000006059	-	98	40.168	ENSAOCG00000016149	rrp12	63	40.569	Amphiprion_ocellaris
ENSCSAVG00000006059	-	98	39.307	ENSAPEG00000016023	rrp12	63	39.716	Amphiprion_percula
ENSCSAVG00000006059	-	99	40.621	ENSATEG00000022627	rrp12	64	40.662	Anabas_testudineus
ENSCSAVG00000006059	-	99	38.308	ENSAPLG00000014387	RRP12	67	38.615	Anas_platyrhynchos
ENSCSAVG00000006059	-	99	38.398	ENSACAG00000002175	RRP12	63	38.398	Anolis_carolinensis
ENSCSAVG00000006059	-	99	38.771	ENSANAG00000037485	RRP12	69	38.915	Aotus_nancymaae
ENSCSAVG00000006059	-	99	40.741	ENSACLG00000007354	rrp12	64	40.662	Astatotilapia_calliptera
ENSCSAVG00000006059	-	99	38.671	ENSAMXG00000012852	rrp12	64	39.265	Astyanax_mexicanus
ENSCSAVG00000006059	-	99	40.000	ENSBTAG00000002191	RRP12	67	40.000	Bos_taurus
ENSCSAVG00000006059	-	99	38.732	ENSCJAG00000016549	-	75	39.125	Callithrix_jacchus
ENSCSAVG00000006059	-	99	39.298	ENSCAFG00000009043	RRP12	64	39.883	Canis_familiaris
ENSCSAVG00000006059	-	99	39.298	ENSCAFG00020005991	RRP12	64	39.883	Canis_lupus_dingo
ENSCSAVG00000006059	-	99	37.294	ENSCHIG00000011876	RRP12	63	37.294	Capra_hircus
ENSCSAVG00000006059	-	83	38.354	ENSTSYG00000030210	-	99	38.089	Carlito_syrichta
ENSCSAVG00000006059	-	99	36.525	ENSCAPG00000008991	RRP12	67	36.525	Cavia_aperea
ENSCSAVG00000006059	-	99	38.607	ENSCPOG00000004215	RRP12	64	38.607	Cavia_porcellus
ENSCSAVG00000006059	-	99	39.033	ENSCCAG00000033123	-	75	39.151	Cebus_capucinus
ENSCSAVG00000006059	-	64	43.842	ENSCCAG00000024088	RRP12	61	43.842	Cebus_capucinus
ENSCSAVG00000006059	-	94	38.745	ENSCATG00000045310	RRP12	61	39.157	Cercocebus_atys
ENSCSAVG00000006059	-	99	38.967	ENSCLAG00000003753	RRP12	64	39.269	Chinchilla_lanigera
ENSCSAVG00000006059	-	99	38.740	ENSCSAG00000005877	RRP12	72	38.740	Chlorocebus_sabaeus
ENSCSAVG00000006059	-	99	39.248	ENSCPBG00000011935	RRP12	66	39.623	Chrysemys_picta_bellii
ENSCSAVG00000006059	-	99	38.973	ENSCANG00000031653	RRP12	69	39.039	Colobus_angolensis_palliatus
ENSCSAVG00000006059	-	99	39.789	ENSCGRG00001004338	Rrp12	70	39.789	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006059	-	99	39.789	ENSCGRG00000011965	Rrp12	63	39.789	Cricetulus_griseus_crigri
ENSCSAVG00000006059	-	99	39.048	ENSCSEG00000007799	rrp12	64	38.989	Cynoglossus_semilaevis
ENSCSAVG00000006059	-	99	39.593	ENSCVAG00000003418	rrp12	64	40.710	Cyprinodon_variegatus
ENSCSAVG00000006059	-	99	38.107	ENSDARG00000022410	rrp12	64	38.843	Danio_rerio
ENSCSAVG00000006059	-	99	38.156	ENSDNOG00000005120	RRP12	64	38.506	Dasypus_novemcinctus
ENSCSAVG00000006059	-	99	39.365	ENSDORG00000009199	Rrp12	64	39.365	Dipodomys_ordii
ENSCSAVG00000006059	-	94	34.864	ENSETEG00000002455	RRP12	61	35.367	Echinops_telfairi
ENSCSAVG00000006059	-	73	59.322	ENSEBUG00000006555	rrp12	54	59.322	Eptatretus_burgeri
ENSCSAVG00000006059	-	99	39.483	ENSEASG00005008693	RRP12	64	39.835	Equus_asinus_asinus
ENSCSAVG00000006059	-	99	39.365	ENSECAG00000010892	RRP12	68	39.718	Equus_caballus
ENSCSAVG00000006059	-	99	39.505	ENSELUG00000010510	rrp12	67	38.896	Esox_lucius
ENSCSAVG00000006059	-	99	40.023	ENSFCAG00000028639	RRP12	69	40.023	Felis_catus
ENSCSAVG00000006059	-	99	38.462	ENSFALG00000008458	RRP12	68	38.698	Ficedula_albicollis
ENSCSAVG00000006059	-	99	39.532	ENSFDAG00000019108	RRP12	61	39.741	Fukomys_damarensis
ENSCSAVG00000006059	-	98	39.372	ENSFHEG00000004148	rrp12	67	39.665	Fundulus_heteroclitus
ENSCSAVG00000006059	-	93	40.645	ENSGMOG00000004188	rrp12	59	40.645	Gadus_morhua
ENSCSAVG00000006059	-	98	40.167	ENSGALG00000041331	RRP12	61	39.928	Gallus_gallus
ENSCSAVG00000006059	-	99	39.692	ENSGAFG00000009038	rrp12	64	40.142	Gambusia_affinis
ENSCSAVG00000006059	-	99	39.068	ENSGACG00000007175	rrp12	64	39.007	Gasterosteus_aculeatus
ENSCSAVG00000006059	-	99	39.090	ENSGGOG00000014850	RRP12	69	39.323	Gorilla_gorilla
ENSCSAVG00000006059	-	99	41.099	ENSHBUG00000023527	rrp12	64	41.017	Haplochromis_burtoni
ENSCSAVG00000006059	-	99	39.156	ENSHGLG00000016772	RRP12	64	39.319	Heterocephalus_glaber_female
ENSCSAVG00000006059	-	99	39.156	ENSHGLG00100015110	RRP12	64	39.319	Heterocephalus_glaber_male
ENSCSAVG00000006059	-	99	39.976	ENSHCOG00000019519	rrp12	63	40.534	Hippocampus_comes
ENSCSAVG00000006059	-	100	37.618	ENSIPUG00000000311	RRP12	63	38.280	Ictalurus_punctatus
ENSCSAVG00000006059	-	99	39.202	ENSSTOG00000006515	RRP12	64	39.458	Ictidomys_tridecemlineatus
ENSCSAVG00000006059	-	99	38.660	ENSJJAG00000000110	Rrp12	65	39.059	Jaculus_jaculus
ENSCSAVG00000006059	-	99	40.438	ENSKMAG00000020621	rrp12	63	40.534	Kryptolebias_marmoratus
ENSCSAVG00000006059	-	99	38.869	ENSLBEG00000015335	rrp12	64	39.471	Labrus_bergylta
ENSCSAVG00000006059	-	81	35.311	ENSLACG00000016633	RRP12	58	35.745	Latimeria_chalumnae
ENSCSAVG00000006059	-	90	40.052	ENSLOCG00000003846	rrp12	58	40.052	Lepisosteus_oculatus
ENSCSAVG00000006059	-	99	38.551	ENSLAFG00000015965	RRP12	64	39.019	Loxodonta_africana
ENSCSAVG00000006059	-	99	39.090	ENSMFAG00000041558	RRP12	69	39.090	Macaca_fascicularis
ENSCSAVG00000006059	-	99	39.090	ENSMMUG00000019634	RRP12	69	39.090	Macaca_mulatta
ENSCSAVG00000006059	-	99	36.639	ENSMNEG00000036759	RRP12	68	36.873	Macaca_nemestrina
ENSCSAVG00000006059	-	99	39.090	ENSMLEG00000041317	RRP12	69	39.090	Mandrillus_leucophaeus
ENSCSAVG00000006059	-	99	40.344	ENSMAMG00000002964	rrp12	69	39.763	Mastacembelus_armatus
ENSCSAVG00000006059	-	99	40.980	ENSMZEG00005003241	rrp12	64	40.898	Maylandia_zebra
ENSCSAVG00000006059	-	99	39.906	ENSMGAG00000009829	RRP12	63	39.669	Meleagris_gallopavo
ENSCSAVG00000006059	-	99	37.380	ENSMAUG00000020743	Rrp12	63	37.380	Mesocricetus_auratus
ENSCSAVG00000006059	-	99	39.013	ENSMICG00000007624	RRP12	69	39.013	Microcebus_murinus
ENSCSAVG00000006059	-	99	39.766	ENSMOCG00000006753	Rrp12	64	39.766	Microtus_ochrogaster
ENSCSAVG00000006059	-	99	40.266	ENSMMOG00000010708	rrp12	63	40.266	Mola_mola
ENSCSAVG00000006059	-	99	40.732	ENSMODG00000004315	RRP12	63	40.968	Monodelphis_domestica
ENSCSAVG00000006059	-	99	38.136	ENSMALG00000016560	rrp12	62	38.601	Monopterus_albus
ENSCSAVG00000006059	-	99	38.985	MGP_CAROLIEiJ_G0022957	Rrp12	64	39.195	Mus_caroli
ENSCSAVG00000006059	-	99	39.227	ENSMUSG00000035049	Rrp12	64	39.440	Mus_musculus
ENSCSAVG00000006059	-	99	39.273	MGP_PahariEiJ_G0014447	Rrp12	64	39.486	Mus_pahari
ENSCSAVG00000006059	-	99	39.110	MGP_SPRETEiJ_G0023878	Rrp12	64	39.440	Mus_spretus
ENSCSAVG00000006059	-	99	38.876	ENSMPUG00000017046	RRP12	64	39.176	Mustela_putorius_furo
ENSCSAVG00000006059	-	99	39.019	ENSMLUG00000017160	RRP12	64	39.019	Myotis_lucifugus
ENSCSAVG00000006059	-	99	38.921	ENSNGAG00000024144	Rrp12	64	38.947	Nannospalax_galili
ENSCSAVG00000006059	-	99	41.616	ENSNBRG00000009987	rrp12	63	41.525	Neolamprologus_brichardi
ENSCSAVG00000006059	-	99	34.235	ENSNLEG00000013762	RRP12	69	34.548	Nomascus_leucogenys
ENSCSAVG00000006059	-	100	41.677	ENSMEUG00000003185	RRP12	64	41.745	Notamacropus_eugenii
ENSCSAVG00000006059	-	89	37.285	ENSOPRG00000005001	RRP12	57	37.910	Ochotona_princeps
ENSCSAVG00000006059	-	99	39.074	ENSODEG00000016439	RRP12	63	39.021	Octodon_degus
ENSCSAVG00000006059	-	99	40.214	ENSONIG00000009528	rrp12	64	40.662	Oreochromis_niloticus
ENSCSAVG00000006059	-	99	37.898	ENSOANG00000006560	RRP12	63	37.915	Ornithorhynchus_anatinus
ENSCSAVG00000006059	-	99	38.615	ENSOCUG00000005662	RRP12	64	39.085	Oryctolagus_cuniculus
ENSCSAVG00000006059	-	99	40.311	ENSORLG00000008688	rrp12	64	40.355	Oryzias_latipes
ENSCSAVG00000006059	-	96	39.360	ENSORLG00020002355	rrp12	63	39.483	Oryzias_latipes_hni
ENSCSAVG00000006059	-	99	40.191	ENSORLG00015006709	rrp12	64	40.118	Oryzias_latipes_hsok
ENSCSAVG00000006059	-	96	39.852	ENSOMEG00000002609	rrp12	62	39.975	Oryzias_melastigma
ENSCSAVG00000006059	-	99	38.453	ENSOGAG00000001626	RRP12	64	38.570	Otolemur_garnettii
ENSCSAVG00000006059	-	99	39.554	ENSOARG00000009681	RRP12	64	39.554	Ovis_aries
ENSCSAVG00000006059	-	99	39.461	ENSPPAG00000043885	RRP12	69	39.529	Pan_paniscus
ENSCSAVG00000006059	-	99	40.023	ENSPPRG00000002029	RRP12	69	40.023	Panthera_pardus
ENSCSAVG00000006059	-	99	39.836	ENSPTIG00000004428	RRP12	69	40.023	Panthera_tigris_altaica
ENSCSAVG00000006059	-	99	39.461	ENSPTRG00000002806	RRP12	69	39.529	Pan_troglodytes
ENSCSAVG00000006059	-	99	39.207	ENSPANG00000021360	RRP12	69	39.207	Papio_anubis
ENSCSAVG00000006059	-	99	40.286	ENSPKIG00000016516	rrp12	63	40.644	Paramormyrops_kingsleyae
ENSCSAVG00000006059	-	98	39.855	ENSPMGG00000020217	rrp12	63	40.215	Periophthalmus_magnuspinnatus
ENSCSAVG00000006059	-	99	38.759	ENSPEMG00000008437	Rrp12	64	39.090	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006059	-	99	40.214	ENSPCIG00000002157	RRP12	63	40.214	Phascolarctos_cinereus
ENSCSAVG00000006059	-	99	40.143	ENSPFOG00000014975	rrp12	64	40.071	Poecilia_formosa
ENSCSAVG00000006059	-	99	40.024	ENSPLAG00000009840	rrp12	64	39.953	Poecilia_latipinna
ENSCSAVG00000006059	-	99	40.528	ENSPMEG00000021871	rrp12	64	40.071	Poecilia_mexicana
ENSCSAVG00000006059	-	98	40.048	ENSPREG00000020950	rrp12	63	39.976	Poecilia_reticulata
ENSCSAVG00000006059	-	99	38.804	ENSPPYG00000002528	RRP12	65	39.039	Pongo_abelii
ENSCSAVG00000006059	-	99	38.615	ENSPCAG00000008967	RRP12	64	38.615	Procavia_capensis
ENSCSAVG00000006059	-	99	37.972	ENSPCOG00000014009	RRP12	69	38.751	Propithecus_coquereli
ENSCSAVG00000006059	-	99	35.605	ENSPVAG00000003370	RRP12	64	35.605	Pteropus_vampyrus
ENSCSAVG00000006059	-	99	41.099	ENSPNYG00000009451	rrp12	64	41.017	Pundamilia_nyererei
ENSCSAVG00000006059	-	99	39.333	ENSPNAG00000007658	rrp12	63	40.119	Pygocentrus_nattereri
ENSCSAVG00000006059	-	99	39.202	ENSRNOG00000048495	Rrp12	64	39.508	Rattus_norvegicus
ENSCSAVG00000006059	-	99	38.973	ENSRBIG00000021296	RRP12	69	38.973	Rhinopithecus_bieti
ENSCSAVG00000006059	-	99	38.973	ENSRROG00000032482	RRP12	69	38.973	Rhinopithecus_roxellana
ENSCSAVG00000006059	-	99	38.763	ENSSBOG00000030992	RRP12	69	38.869	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006059	-	100	40.378	ENSSHAG00000018275	RRP12	64	40.872	Sarcophilus_harrisii
ENSCSAVG00000006059	-	99	39.715	ENSSFOG00015016400	rrp12	63	39.715	Scleropages_formosus
ENSCSAVG00000006059	-	99	38.293	ENSSMAG00000004047	rrp12	63	40.119	Scophthalmus_maximus
ENSCSAVG00000006059	-	99	40.197	ENSSDUG00000022871	rrp12	63	39.620	Seriola_dumerili
ENSCSAVG00000006059	-	99	39.568	ENSSLDG00000003038	rrp12	63	39.620	Seriola_lalandi_dorsalis
ENSCSAVG00000006059	-	99	38.316	ENSSPUG00000012221	RRP12	63	38.197	Sphenodon_punctatus
ENSCSAVG00000006059	-	99	39.586	ENSSPAG00000002261	rrp12	64	40.071	Stegastes_partitus
ENSCSAVG00000006059	-	99	38.706	ENSSSCG00000010514	RRP12	64	39.340	Sus_scrofa
ENSCSAVG00000006059	-	99	37.796	ENSTGUG00000009711	RRP12	71	38.690	Taeniopygia_guttata
ENSCSAVG00000006059	-	99	37.893	ENSTRUG00000012017	rrp12	64	37.998	Takifugu_rubripes
ENSCSAVG00000006059	-	99	38.361	ENSTNIG00000016522	rrp12	64	38.480	Tetraodon_nigroviridis
ENSCSAVG00000006059	-	80	42.520	ENSTBEG00000004907	RRP12	53	42.520	Tupaia_belangeri
ENSCSAVG00000006059	-	99	38.869	ENSTTRG00000009878	RRP12	64	39.176	Tursiops_truncatus
ENSCSAVG00000006059	-	99	39.141	ENSUAMG00000009092	RRP12	64	39.649	Ursus_americanus
ENSCSAVG00000006059	-	99	39.269	ENSUMAG00000021621	RRP12	65	39.480	Ursus_maritimus
ENSCSAVG00000006059	-	99	39.269	ENSVVUG00000023168	RRP12	63	39.976	Vulpes_vulpes
ENSCSAVG00000006059	-	99	40.378	ENSXETG00000003430	rrp12	63	40.592	Xenopus_tropicalis
ENSCSAVG00000006059	-	95	39.186	ENSXCOG00000012082	rrp12	60	39.313	Xiphophorus_couchianus
ENSCSAVG00000006059	-	99	41.010	ENSXMAG00000013498	rrp12	63	41.354	Xiphophorus_maculatus