EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006078 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 204 bases
Position: chrreftig_226:139948-140151
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010311	RNA_pol_N	PF01194.17	2.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010436	-	204	-	ENSCSAVP00000010311	67 (aa)	-	H2YYA0

Gene Model

Click here to download ENSCSAVG00000006078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006078	-	100	89.552	ENSG00000177700	POLR2L	100	89.552	Homo_sapiens
ENSCSAVG00000006078	-	100	91.045	ENSAPOG00000011116	polr2l	100	91.045	Acanthochromis_polyacanthus
ENSCSAVG00000006078	-	100	91.045	ENSACIG00000005514	polr2l	100	91.045	Amphilophus_citrinellus
ENSCSAVG00000006078	-	100	91.045	ENSAOCG00000012342	polr2l	100	91.045	Amphiprion_ocellaris
ENSCSAVG00000006078	-	100	91.045	ENSAPEG00000015365	polr2l	100	91.045	Amphiprion_percula
ENSCSAVG00000006078	-	100	91.045	ENSATEG00000007953	polr2l	100	91.045	Anabas_testudineus
ENSCSAVG00000006078	-	100	89.552	ENSACAG00000015509	POLR2L	100	89.552	Anolis_carolinensis
ENSCSAVG00000006078	-	100	89.552	ENSANAG00000022996	POLR2L	100	89.552	Aotus_nancymaae
ENSCSAVG00000006078	-	100	91.045	ENSACLG00000026685	polr2l	100	91.045	Astatotilapia_calliptera
ENSCSAVG00000006078	-	100	91.045	ENSAMXG00000037735	polr2l	100	91.045	Astyanax_mexicanus
ENSCSAVG00000006078	-	100	89.552	ENSBTAG00000031061	POLR2L	100	89.552	Bos_taurus
ENSCSAVG00000006078	-	100	85.075	WBGene00021347	rpb-10	100	85.075	Caenorhabditis_elegans
ENSCSAVG00000006078	-	100	89.552	ENSCJAG00000041101	POLR2L	100	89.552	Callithrix_jacchus
ENSCSAVG00000006078	-	100	89.552	ENSCAFG00020017621	POLR2L	100	89.552	Canis_lupus_dingo
ENSCSAVG00000006078	-	100	89.552	ENSCHIG00000023006	POLR2L	100	89.552	Capra_hircus
ENSCSAVG00000006078	-	100	65.672	ENSTSYG00000027353	-	100	65.672	Carlito_syrichta
ENSCSAVG00000006078	-	100	89.552	ENSCPOG00000033252	POLR2L	100	89.552	Cavia_porcellus
ENSCSAVG00000006078	-	100	89.552	ENSCCAG00000035630	POLR2L	100	89.552	Cebus_capucinus
ENSCSAVG00000006078	-	100	60.274	ENSCATG00000034571	-	100	60.274	Cercocebus_atys
ENSCSAVG00000006078	-	100	89.552	ENSCATG00000041490	POLR2L	100	89.552	Cercocebus_atys
ENSCSAVG00000006078	-	100	89.552	ENSCLAG00000002071	POLR2L	100	89.552	Chinchilla_lanigera
ENSCSAVG00000006078	-	100	89.552	ENSCSAG00000010528	POLR2L	100	89.552	Chlorocebus_sabaeus
ENSCSAVG00000006078	-	100	89.552	ENSCPBG00000007106	POLR2L	100	89.552	Chrysemys_picta_bellii
ENSCSAVG00000006078	-	100	89.552	ENSCANG00000043116	POLR2L	100	89.552	Colobus_angolensis_palliatus
ENSCSAVG00000006078	-	100	86.567	ENSCGRG00001003398	-	87	86.567	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006078	-	100	89.552	ENSCGRG00001023078	-	100	89.552	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006078	-	100	86.567	ENSCGRG00000019284	-	87	86.567	Cricetulus_griseus_crigri
ENSCSAVG00000006078	-	100	89.552	ENSCGRG00000018042	-	100	89.552	Cricetulus_griseus_crigri
ENSCSAVG00000006078	-	100	91.045	ENSCSEG00000001959	polr2l	100	91.045	Cynoglossus_semilaevis
ENSCSAVG00000006078	-	100	91.045	ENSCVAG00000007386	polr2l	100	91.045	Cyprinodon_variegatus
ENSCSAVG00000006078	-	100	91.045	ENSDARG00000058349	polr2l	100	91.045	Danio_rerio
ENSCSAVG00000006078	-	96	67.188	ENSDNOG00000049434	-	100	67.188	Dasypus_novemcinctus
ENSCSAVG00000006078	-	100	89.552	FBgn0039218	Rpb10	100	89.552	Drosophila_melanogaster
ENSCSAVG00000006078	-	100	89.552	ENSETEG00000012556	POLR2L	100	89.552	Echinops_telfairi
ENSCSAVG00000006078	-	100	91.045	ENSEBUG00000000392	-	100	91.045	Eptatretus_burgeri
ENSCSAVG00000006078	-	100	91.045	ENSEBUG00000010353	-	100	91.045	Eptatretus_burgeri
ENSCSAVG00000006078	-	100	61.194	ENSEASG00005017228	-	85	61.194	Equus_asinus_asinus
ENSCSAVG00000006078	-	100	89.552	ENSEASG00005007478	POLR2L	100	89.552	Equus_asinus_asinus
ENSCSAVG00000006078	-	100	61.194	ENSECAG00000001180	POLR2L	85	61.194	Equus_caballus
ENSCSAVG00000006078	-	100	89.552	ENSECAG00000031030	POLR2L	100	89.552	Equus_caballus
ENSCSAVG00000006078	-	100	65.672	ENSEEUG00000015795	-	100	65.672	Erinaceus_europaeus
ENSCSAVG00000006078	-	100	89.552	ENSELUG00000009612	RPAB5	100	89.552	Esox_lucius
ENSCSAVG00000006078	-	100	89.552	ENSFCAG00000043112	POLR2L	100	89.552	Felis_catus
ENSCSAVG00000006078	-	100	89.552	ENSFALG00000012058	POLR2L	100	89.552	Ficedula_albicollis
ENSCSAVG00000006078	-	100	89.552	ENSFDAG00000021533	POLR2L	100	89.552	Fukomys_damarensis
ENSCSAVG00000006078	-	100	91.045	ENSFHEG00000019804	polr2l	100	91.045	Fundulus_heteroclitus
ENSCSAVG00000006078	-	100	89.552	ENSGMOG00000001279	polr2l	100	89.552	Gadus_morhua
ENSCSAVG00000006078	-	100	89.552	ENSGALG00000006841	POLR2L	100	89.552	Gallus_gallus
ENSCSAVG00000006078	-	100	91.045	ENSGAFG00000013789	polr2l	100	91.045	Gambusia_affinis
ENSCSAVG00000006078	-	100	92.537	ENSGAGG00000006577	POLR2L	100	92.537	Gopherus_agassizii
ENSCSAVG00000006078	-	100	89.552	ENSGAGG00000017751	-	51	89.552	Gopherus_agassizii
ENSCSAVG00000006078	-	100	89.552	ENSGGOG00000010821	POLR2L	100	89.552	Gorilla_gorilla
ENSCSAVG00000006078	-	99	60.606	ENSGGOG00000040273	-	100	60.606	Gorilla_gorilla
ENSCSAVG00000006078	-	100	91.045	ENSHBUG00000013767	polr2l	100	91.045	Haplochromis_burtoni
ENSCSAVG00000006078	-	100	89.552	ENSHGLG00000007095	POLR2L	100	89.552	Heterocephalus_glaber_female
ENSCSAVG00000006078	-	100	89.552	ENSHGLG00100010399	POLR2L	100	89.552	Heterocephalus_glaber_male
ENSCSAVG00000006078	-	100	89.552	ENSHCOG00000008730	polr2l	100	89.552	Hippocampus_comes
ENSCSAVG00000006078	-	100	92.537	ENSIPUG00000017431	polr2l	100	92.537	Ictalurus_punctatus
ENSCSAVG00000006078	-	99	64.179	ENSSTOG00000022797	-	81	64.179	Ictidomys_tridecemlineatus
ENSCSAVG00000006078	-	100	77.612	ENSJJAG00000011334	-	100	77.612	Jaculus_jaculus
ENSCSAVG00000006078	-	100	89.552	ENSJJAG00000011194	-	100	89.552	Jaculus_jaculus
ENSCSAVG00000006078	-	100	91.045	ENSKMAG00000003267	polr2l	100	91.045	Kryptolebias_marmoratus
ENSCSAVG00000006078	-	100	89.552	ENSLBEG00000000928	polr2l	100	89.552	Labrus_bergylta
ENSCSAVG00000006078	-	100	92.537	ENSLACG00000017570	POLR2L	100	92.537	Latimeria_chalumnae
ENSCSAVG00000006078	-	100	89.552	ENSMFAG00000001554	POLR2L	100	89.552	Macaca_fascicularis
ENSCSAVG00000006078	-	100	89.552	ENSMNEG00000026729	POLR2L	100	89.552	Macaca_nemestrina
ENSCSAVG00000006078	-	100	61.644	ENSMLEG00000042017	-	100	61.644	Mandrillus_leucophaeus
ENSCSAVG00000006078	-	100	92.537	ENSMAMG00000021937	polr2l	100	92.537	Mastacembelus_armatus
ENSCSAVG00000006078	-	100	91.045	ENSMZEG00005000960	polr2l	100	91.045	Maylandia_zebra
ENSCSAVG00000006078	-	100	89.552	ENSMGAG00000011610	POLR2L	100	89.552	Meleagris_gallopavo
ENSCSAVG00000006078	-	100	89.552	ENSMAUG00000019023	Polr2l	100	89.552	Mesocricetus_auratus
ENSCSAVG00000006078	-	100	89.552	ENSMICG00000047069	POLR2L	100	89.552	Microcebus_murinus
ENSCSAVG00000006078	-	100	89.552	ENSMOCG00000021062	Polr2l	100	89.552	Microtus_ochrogaster
ENSCSAVG00000006078	-	100	91.045	ENSMMOG00000017276	polr2l	100	91.045	Mola_mola
ENSCSAVG00000006078	-	100	92.537	ENSMALG00000018890	polr2l	100	92.537	Monopterus_albus
ENSCSAVG00000006078	-	100	89.552	MGP_CAROLIEiJ_G0030702	Polr2l	100	89.552	Mus_caroli
ENSCSAVG00000006078	-	100	89.552	ENSMUSG00000038489	Polr2l	100	89.552	Mus_musculus
ENSCSAVG00000006078	-	100	89.552	MGP_PahariEiJ_G0013901	Polr2l	100	89.552	Mus_pahari
ENSCSAVG00000006078	-	100	89.552	ENSMLUG00000005362	POLR2L	100	89.552	Myotis_lucifugus
ENSCSAVG00000006078	-	100	89.552	ENSNGAG00000015204	-	100	89.552	Nannospalax_galili
ENSCSAVG00000006078	-	100	77.612	ENSNGAG00000014203	-	100	77.612	Nannospalax_galili
ENSCSAVG00000006078	-	100	91.045	ENSNBRG00000013837	polr2l	100	91.045	Neolamprologus_brichardi
ENSCSAVG00000006078	-	100	89.552	ENSNLEG00000008683	POLR2L	100	89.552	Nomascus_leucogenys
ENSCSAVG00000006078	-	100	89.552	ENSMEUG00000003938	POLR2L	100	89.552	Notamacropus_eugenii
ENSCSAVG00000006078	-	100	91.045	ENSOPRG00000009675	-	100	91.045	Ochotona_princeps
ENSCSAVG00000006078	-	100	92.537	ENSOPRG00000001702	-	100	92.537	Ochotona_princeps
ENSCSAVG00000006078	-	100	89.552	ENSODEG00000016905	-	100	89.552	Octodon_degus
ENSCSAVG00000006078	-	100	82.090	ENSODEG00000014372	-	100	82.090	Octodon_degus
ENSCSAVG00000006078	-	100	91.045	ENSORLG00000027182	polr2l	99	91.045	Oryzias_latipes
ENSCSAVG00000006078	-	100	91.045	ENSORLG00020012637	polr2l	99	91.045	Oryzias_latipes_hni
ENSCSAVG00000006078	-	100	91.045	ENSORLG00015011064	polr2l	99	91.045	Oryzias_latipes_hsok
ENSCSAVG00000006078	-	100	91.045	ENSOMEG00000020485	polr2l	99	91.045	Oryzias_melastigma
ENSCSAVG00000006078	-	100	89.552	ENSOGAG00000024166	POLR2L	100	89.552	Otolemur_garnettii
ENSCSAVG00000006078	-	52	97.143	ENSPTIG00000012764	POLR2L	52	97.143	Panthera_tigris_altaica
ENSCSAVG00000006078	-	100	89.552	ENSPTRG00000052712	POLR2L	100	89.552	Pan_troglodytes
ENSCSAVG00000006078	-	100	89.552	ENSPANG00000032375	POLR2L	100	89.552	Papio_anubis
ENSCSAVG00000006078	-	100	91.045	ENSPKIG00000017973	polr2l	84	91.045	Paramormyrops_kingsleyae
ENSCSAVG00000006078	-	100	89.552	ENSPSIG00000013867	POLR2L	100	89.552	Pelodiscus_sinensis
ENSCSAVG00000006078	-	100	92.537	ENSPMGG00000004854	polr2l	100	92.537	Periophthalmus_magnuspinnatus
ENSCSAVG00000006078	-	100	76.119	ENSPEMG00000014839	-	100	76.119	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006078	-	100	89.552	ENSPCIG00000008250	-	100	89.552	Phascolarctos_cinereus
ENSCSAVG00000006078	-	100	62.687	ENSPCIG00000011752	-	100	62.687	Phascolarctos_cinereus
ENSCSAVG00000006078	-	100	91.045	ENSPFOG00000004650	polr2l	100	91.045	Poecilia_formosa
ENSCSAVG00000006078	-	100	91.045	ENSPLAG00000010698	polr2l	100	91.045	Poecilia_latipinna
ENSCSAVG00000006078	-	100	91.045	ENSPMEG00000015438	polr2l	100	91.045	Poecilia_mexicana
ENSCSAVG00000006078	-	100	91.045	ENSPREG00000022948	polr2l	100	91.045	Poecilia_reticulata
ENSCSAVG00000006078	-	100	85.075	ENSPPYG00000029850	POLR2L	100	85.075	Pongo_abelii
ENSCSAVG00000006078	-	100	89.552	ENSPCAG00000011644	POLR2L	100	89.552	Procavia_capensis
ENSCSAVG00000006078	-	100	89.552	ENSPVAG00000014859	POLR2L	100	89.552	Pteropus_vampyrus
ENSCSAVG00000006078	-	100	91.045	ENSPNYG00000007348	polr2l	100	91.045	Pundamilia_nyererei
ENSCSAVG00000006078	-	100	91.045	ENSPNAG00000015066	polr2l	100	91.045	Pygocentrus_nattereri
ENSCSAVG00000006078	-	100	85.075	ENSRNOG00000023805	AABR07042789.1	100	85.075	Rattus_norvegicus
ENSCSAVG00000006078	-	100	89.552	ENSRBIG00000033751	POLR2L	100	89.552	Rhinopithecus_bieti
ENSCSAVG00000006078	-	100	89.552	ENSRROG00000045437	-	100	89.552	Rhinopithecus_roxellana
ENSCSAVG00000006078	-	100	89.552	ENSRROG00000001154	-	100	89.552	Rhinopithecus_roxellana
ENSCSAVG00000006078	-	100	72.059	YOR210W	RPB10	97	72.059	Saccharomyces_cerevisiae
ENSCSAVG00000006078	-	100	64.179	ENSSBOG00000026975	-	100	64.179	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006078	-	100	91.045	ENSSFOG00015010252	polr2l	100	91.045	Scleropages_formosus
ENSCSAVG00000006078	-	100	91.045	ENSSMAG00000021392	polr2l	100	91.045	Scophthalmus_maximus
ENSCSAVG00000006078	-	100	92.537	ENSSDUG00000008725	polr2l	100	92.537	Seriola_dumerili
ENSCSAVG00000006078	-	100	92.537	ENSSLDG00000024029	polr2l	100	92.537	Seriola_lalandi_dorsalis
ENSCSAVG00000006078	-	100	89.552	ENSSARG00000007627	POLR2L	100	89.552	Sorex_araneus
ENSCSAVG00000006078	-	100	80.597	ENSSPUG00000005252	POLR2L	69	80.597	Sphenodon_punctatus
ENSCSAVG00000006078	-	100	91.045	ENSSPAG00000019322	polr2l	100	91.045	Stegastes_partitus
ENSCSAVG00000006078	-	100	65.672	ENSSSCG00000012839	-	100	65.672	Sus_scrofa
ENSCSAVG00000006078	-	100	73.134	ENSSSCG00000000461	-	100	73.134	Sus_scrofa
ENSCSAVG00000006078	-	100	89.552	ENSSSCG00000033068	-	100	89.552	Sus_scrofa
ENSCSAVG00000006078	-	100	80.597	ENSTGUG00000009757	POLR2L	100	80.597	Taeniopygia_guttata
ENSCSAVG00000006078	-	100	92.537	ENSTRUG00000017292	polr2l	100	92.537	Takifugu_rubripes
ENSCSAVG00000006078	-	100	89.552	ENSTTRG00000012496	POLR2L	100	89.552	Tursiops_truncatus
ENSCSAVG00000006078	-	100	89.552	ENSUAMG00000024755	-	100	89.552	Ursus_americanus
ENSCSAVG00000006078	-	100	59.701	ENSUAMG00000016335	-	63	59.701	Ursus_americanus
ENSCSAVG00000006078	-	100	89.552	ENSVVUG00000000205	POLR2L	100	89.552	Vulpes_vulpes
ENSCSAVG00000006078	-	100	89.552	ENSXETG00000025768	polr2l.1	100	89.552	Xenopus_tropicalis
ENSCSAVG00000006078	-	100	92.537	ENSXETG00000002878	polr2l.2	100	92.537	Xenopus_tropicalis
ENSCSAVG00000006078	-	100	91.045	ENSXMAG00000007260	polr2l	100	91.045	Xiphophorus_maculatus