EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000006145 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
15143 bases
Position
chrreftig_21:1655346-1670488
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000010433tRNA-synt_1gPF09334.112.1e-13811
ENSCSAVP00000010434tRNA-synt_1gPF09334.116.6e-7611
ENSCSAVP00000010434Anticodon_1PF08264.135e-0711
ENSCSAVP00000010433Anticodon_1PF08264.138.8e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000010560-1864-ENSCSAVP00000010434453 (aa)-H2YYM3
ENSCSAVT00000010559-1822-ENSCSAVP00000010433568 (aa)-H2YYM2
ENSCSAVT00000010558-743-ENSCSAVP00000010432247 (aa)-H2YYM1
Gene Model
Click here to download ENSCSAVG00000006145's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006145's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000006145-9964.348ENSG00000166986MARS8866.667Homo_sapiens
ENSCSAVG00000006145-9764.903ENSAPOG00000020238mars6264.903Acanthochromis_polyacanthus
ENSCSAVG00000006145-9764.716ENSAMEG00000004962MARS6464.223Ailuropoda_melanoleuca
ENSCSAVG00000006145-9963.979ENSACIG00000016271mars7163.979Amphilophus_citrinellus
ENSCSAVG00000006145-9764.727ENSAOCG00000011411mars6264.727Amphiprion_ocellaris
ENSCSAVG00000006145-9764.903ENSAPEG00000008610mars6662.021Amphiprion_percula
ENSCSAVG00000006145-9764.737ENSATEG00000025019mars6264.737Anabas_testudineus
ENSCSAVG00000006145-9765.542ENSAPLG00000014821MARS6864.533Anas_platyrhynchos
ENSCSAVG00000006145-9764.654ENSACAG00000006698MARS6264.654Anolis_carolinensis
ENSCSAVG00000006145-9764.550ENSANAG00000027589MARS6364.550Aotus_nancymaae
ENSCSAVG00000006145-10063.590ENSACLG00000018937mars6265.079Astatotilapia_calliptera
ENSCSAVG00000006145-9863.874ENSAMXG00000017335mars6664.021Astyanax_mexicanus
ENSCSAVG00000006145-9764.362ENSBTAG00000018405MARS6364.311Bos_taurus
ENSCSAVG00000006145-9857.068WBGene00003415mars-18557.068Caenorhabditis_elegans
ENSCSAVG00000006145-9864.223ENSCJAG00000007249MARS6464.223Callithrix_jacchus
ENSCSAVG00000006145-9764.311ENSCAFG00000000229MARS6464.098Canis_familiaris
ENSCSAVG00000006145-9764.311ENSCAFG00020023661MARS6464.098Canis_lupus_dingo
ENSCSAVG00000006145-9764.488ENSCHIG00000027023MARS6364.488Capra_hircus
ENSCSAVG00000006145-9764.716ENSTSYG00000005193MARS6364.273Carlito_syrichta
ENSCSAVG00000006145-9265.306ENSCAPG00000014448MARS7365.306Cavia_aperea
ENSCSAVG00000006145-9864.098ENSCPOG00000012866MARS6364.098Cavia_porcellus
ENSCSAVG00000006145-9864.049ENSCCAG00000032206MARS7364.049Cebus_capucinus
ENSCSAVG00000006145-9963.668ENSCATG00000038907MARS6463.668Cercocebus_atys
ENSCSAVG00000006145-9963.240ENSCLAG00000012164MARS6663.240Chinchilla_lanigera
ENSCSAVG00000006145-9963.339ENSCSAG00000004852MARS6463.339Chlorocebus_sabaeus
ENSCSAVG00000006145-10060.585ENSCPBG00000017136MARS6461.620Chrysemys_picta_bellii
ENSCSAVG00000006145-9882.570ENSCING00000018550-8582.570Ciona_intestinalis
ENSCSAVG00000006145-9963.668ENSCANG00000034583MARS6463.668Colobus_angolensis_palliatus
ENSCSAVG00000006145-9963.826ENSCGRG00001019238Mars6463.826Cricetulus_griseus_chok1gshd
ENSCSAVG00000006145-9963.826ENSCGRG00000017321Mars6463.826Cricetulus_griseus_crigri
ENSCSAVG00000006145-9864.398ENSCSEG00000010816mars6264.903Cynoglossus_semilaevis
ENSCSAVG00000006145-9764.903ENSCVAG00000009314mars6264.903Cyprinodon_variegatus
ENSCSAVG00000006145-9763.492ENSDARG00000034396mars6063.492Danio_rerio
ENSCSAVG00000006145-9863.085ENSDNOG00000017502MARS6463.085Dasypus_novemcinctus
ENSCSAVG00000006145-9764.362ENSDORG00000007127Mars6364.311Dipodomys_ordii
ENSCSAVG00000006145-9757.570FBgn0034401MetRS5557.570Drosophila_melanogaster
ENSCSAVG00000006145-10059.355ENSETEG00000007106MARS8759.743Echinops_telfairi
ENSCSAVG00000006145-9356.111ENSEBUG00000010439mars8656.111Eptatretus_burgeri
ENSCSAVG00000006145-9963.937ENSEASG00005007208MARS6463.937Equus_asinus_asinus
ENSCSAVG00000006145-9963.937ENSECAG00000015175MARS6463.937Equus_caballus
ENSCSAVG00000006145-9864.860ENSELUG00000010453mars6365.432Esox_lucius
ENSCSAVG00000006145-9863.874ENSFCAG00000002083MARS6463.874Felis_catus
ENSCSAVG00000006145-9963.652ENSFDAG00000010217MARS6663.652Fukomys_damarensis
ENSCSAVG00000006145-9764.374ENSFHEG00000016374mars6264.374Fundulus_heteroclitus
ENSCSAVG00000006145-9765.845ENSGMOG00000007987mars6365.845Gadus_morhua
ENSCSAVG00000006145-9765.009ENSGALG00000039315MARS6365.009Gallus_gallus
ENSCSAVG00000006145-9963.558ENSGAFG00000013461mars6563.558Gambusia_affinis
ENSCSAVG00000006145-9864.273ENSGACG00000006474mars6264.273Gasterosteus_aculeatus
ENSCSAVG00000006145-9765.364ENSGAGG00000011640MARS6265.364Gopherus_agassizii
ENSCSAVG00000006145-9964.174ENSGGOG00000001982MARS6464.727Gorilla_gorilla
ENSCSAVG00000006145-9960.470ENSHBUG00000009575mars6263.060Haplochromis_burtoni
ENSCSAVG00000006145-9963.826ENSHGLG00000013493MARS6463.826Heterocephalus_glaber_female
ENSCSAVG00000006145-9955.142ENSHGLG00000019739-6255.142Heterocephalus_glaber_female
ENSCSAVG00000006145-9963.826ENSHGLG00100006885MARS6463.826Heterocephalus_glaber_male
ENSCSAVG00000006145-9954.078ENSHGLG00100004906-6154.078Heterocephalus_glaber_male
ENSCSAVG00000006145-9764.903ENSHCOG00000001090mars6264.903Hippocampus_comes
ENSCSAVG00000006145-9863.415ENSIPUG00000024413mars9563.415Ictalurus_punctatus
ENSCSAVG00000006145-9863.652ENSIPUG00000024410mars6963.652Ictalurus_punctatus
ENSCSAVG00000006145-9963.478ENSSTOG00000001128MARS6463.478Ictidomys_tridecemlineatus
ENSCSAVG00000006145-9963.130ENSJJAG00000018827Mars6463.130Jaculus_jaculus
ENSCSAVG00000006145-9764.675ENSKMAG00000012408mars6864.675Kryptolebias_marmoratus
ENSCSAVG00000006145-9864.572ENSLBEG00000013609mars6265.079Labrus_bergylta
ENSCSAVG00000006145-9764.311ENSLACG00000018854MARS6364.311Latimeria_chalumnae
ENSCSAVG00000006145-5866.288ENSLOCG00000000371-9966.288Lepisosteus_oculatus
ENSCSAVG00000006145-9963.826ENSLAFG00000013525MARS6463.826Loxodonta_africana
ENSCSAVG00000006145-9963.652ENSMFAG00000010123MARS6463.652Macaca_fascicularis
ENSCSAVG00000006145-9964.000ENSMMUG00000011277MARS8866.667Macaca_mulatta
ENSCSAVG00000006145-9962.976ENSMNEG00000044464MARS6462.976Macaca_nemestrina
ENSCSAVG00000006145-8983.962ENSMLEG00000034638MARS6483.962Mandrillus_leucophaeus
ENSCSAVG00000006145-9963.448ENSMAMG00000010012mars6864.437Mastacembelus_armatus
ENSCSAVG00000006145-9864.460ENSMZEG00005007092mars6464.236Maylandia_zebra
ENSCSAVG00000006145-5171.280ENSMGAG00000004209-9871.280Meleagris_gallopavo
ENSCSAVG00000006145-10063.095ENSMAUG00000011482Mars6763.095Mesocricetus_auratus
ENSCSAVG00000006145-9964.000ENSMICG00000032056MARS6464.000Microcebus_murinus
ENSCSAVG00000006145-9864.085ENSMOCG00000010941Mars6364.085Microtus_ochrogaster
ENSCSAVG00000006145-9764.021ENSMMOG00000007461mars6364.021Mola_mola
ENSCSAVG00000006145-9764.374ENSMALG00000010005mars6864.374Monopterus_albus
ENSCSAVG00000006145-9863.047MGP_CAROLIEiJ_G0015891Mars6363.222Mus_caroli
ENSCSAVG00000006145-9862.872ENSMUSG00000040354Mars6363.047Mus_musculus
ENSCSAVG00000006145-9863.047MGP_PahariEiJ_G0031194Mars6363.222Mus_pahari
ENSCSAVG00000006145-9863.047MGP_SPRETEiJ_G0016717Mars6363.222Mus_spretus
ENSCSAVG00000006145-9863.573ENSMPUG00000001831MARS6463.351Mustela_putorius_furo
ENSCSAVG00000006145-9964.174ENSMLUG00000001037MARS6464.174Myotis_lucifugus
ENSCSAVG00000006145-9963.304ENSNGAG00000018824Mars6463.304Nannospalax_galili
ENSCSAVG00000006145-9763.903ENSNBRG00000004105mars6963.095Neolamprologus_brichardi
ENSCSAVG00000006145-9963.478ENSNLEG00000017297MARS6463.478Nomascus_leucogenys
ENSCSAVG00000006145-9764.841ENSMEUG00000007195MARS7064.841Notamacropus_eugenii
ENSCSAVG00000006145-9862.172ENSOPRG00000006518MARS6362.172Ochotona_princeps
ENSCSAVG00000006145-9764.488ENSODEG00000001752MARS6364.488Octodon_degus
ENSCSAVG00000006145-9964.261ENSONIG00000005090mars6364.261Oreochromis_niloticus
ENSCSAVG00000006145-6872.180ENSOANG00000013318MARS6172.180Ornithorhynchus_anatinus
ENSCSAVG00000006145-9864.098ENSOCUG00000007373MARS6364.098Oryctolagus_cuniculus
ENSCSAVG00000006145-9764.198ENSORLG00000005405mars6264.198Oryzias_latipes
ENSCSAVG00000006145-9764.550ENSORLG00020017397mars6264.550Oryzias_latipes_hni
ENSCSAVG00000006145-9764.550ENSORLG00015012976mars6264.550Oryzias_latipes_hsok
ENSCSAVG00000006145-9764.550ENSOMEG00000018411mars6764.550Oryzias_melastigma
ENSCSAVG00000006145-9962.759ENSOGAG00000005226MARS6462.759Otolemur_garnettii
ENSCSAVG00000006145-9764.311ENSOARG00000006477MARS6364.311Ovis_aries
ENSCSAVG00000006145-9764.894ENSPPAG00000025147MARS6364.894Pan_paniscus
ENSCSAVG00000006145-9863.874ENSPPRG00000023243MARS6463.874Panthera_pardus
ENSCSAVG00000006145-9863.874ENSPTIG00000006721MARS6463.874Panthera_tigris_altaica
ENSCSAVG00000006145-9964.174ENSPTRG00000005135MARS6464.174Pan_troglodytes
ENSCSAVG00000006145-9963.668ENSPANG00000009140MARS6463.668Papio_anubis
ENSCSAVG00000006145-9961.565ENSPKIG00000002833mars6362.807Paramormyrops_kingsleyae
ENSCSAVG00000006145-9537.128ENSPSIG00000013607MARS6438.354Pelodiscus_sinensis
ENSCSAVG00000006145-9765.256ENSPMGG00000014847mars6765.256Periophthalmus_magnuspinnatus
ENSCSAVG00000006145-9864.148ENSPEMG00000000046Mars6364.448Peromyscus_maniculatus_bairdii
ENSCSAVG00000006145-9764.894ENSPCIG00000023765MARS6364.841Phascolarctos_cinereus
ENSCSAVG00000006145-9764.727ENSPFOG00000006998mars6463.465Poecilia_formosa
ENSCSAVG00000006145-9764.727ENSPLAG00000017870mars6463.465Poecilia_latipinna
ENSCSAVG00000006145-9764.727ENSPMEG00000008197mars6664.125Poecilia_mexicana
ENSCSAVG00000006145-9764.727ENSPREG00000008123mars6964.561Poecilia_reticulata
ENSCSAVG00000006145-9963.478ENSPPYG00000004691MARS6463.478Pongo_abelii
ENSCSAVG00000006145-9763.251ENSPCAG00000016037MARS6663.251Procavia_capensis
ENSCSAVG00000006145-9964.174ENSPCOG00000017598MARS6464.174Propithecus_coquereli
ENSCSAVG00000006145-10063.932ENSPNYG00000013809mars6465.432Pundamilia_nyererei
ENSCSAVG00000006145-9863.700ENSPNAG00000017290mars6363.167Pygocentrus_nattereri
ENSCSAVG00000006145-9963.021ENSRNOG00000025459Mars6463.021Rattus_norvegicus
ENSCSAVG00000006145-9964.000ENSRBIG00000044782MARS6464.000Rhinopithecus_bieti
ENSCSAVG00000006145-9964.174ENSRROG00000042331MARS6464.174Rhinopithecus_roxellana
ENSCSAVG00000006145-9753.819YGR264CMES17553.819Saccharomyces_cerevisiae
ENSCSAVG00000006145-9861.082ENSSBOG00000022875MARS6361.082Saimiri_boliviensis_boliviensis
ENSCSAVG00000006145-9964.138ENSSHAG00000007182MARS6564.138Sarcophilus_harrisii
ENSCSAVG00000006145-9762.963ENSSFOG00015011038mars6662.963Scleropages_formosus
ENSCSAVG00000006145-9864.223ENSSMAG00000012409mars6664.727Scophthalmus_maximus
ENSCSAVG00000006145-9764.550ENSSDUG00000019070mars6264.550Seriola_dumerili
ENSCSAVG00000006145-9963.448ENSSLDG00000005561mars6763.448Seriola_lalandi_dorsalis
ENSCSAVG00000006145-8380.808ENSSARG00000002477MARS5680.374Sorex_araneus
ENSCSAVG00000006145-8368.454ENSSPUG00000007756MARS6269.068Sphenodon_punctatus
ENSCSAVG00000006145-9764.903ENSSPAG00000022691mars6264.789Stegastes_partitus
ENSCSAVG00000006145-9964.348ENSSSCG00000023318MARS6164.348Sus_scrofa
ENSCSAVG00000006145-9765.026ENSTRUG00000014774mars6265.026Takifugu_rubripes
ENSCSAVG00000006145-9963.511ENSTNIG00000007060mars6363.511Tetraodon_nigroviridis
ENSCSAVG00000006145-10050.753ENSTBEG00000000303MARS6853.757Tupaia_belangeri
ENSCSAVG00000006145-9864.273ENSTTRG00000013088MARS6364.273Tursiops_truncatus
ENSCSAVG00000006145-9864.098ENSUMAG00000019826MARS6463.874Ursus_maritimus
ENSCSAVG00000006145-9864.273ENSVVUG00000017940MARS6464.273Vulpes_vulpes
ENSCSAVG00000006145-10058.386ENSXETG00000025174mars8961.949Xenopus_tropicalis
ENSCSAVG00000006145-9764.550ENSXCOG00000013878mars6563.293Xiphophorus_couchianus
ENSCSAVG00000006145-9764.550ENSXMAG00000017920mars6463.293Xiphophorus_maculatus

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