EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006151 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2798 bases
Position: chrreftig_19:401011-403808
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010454	RNA_pol_Rpb8	PF03870.15	5.1e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010580	-	738	-	ENSCSAVP00000010454	152 (aa)	-	H2YYP3

Gene Model

Click here to download ENSCSAVG00000006151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006151	-	99	74.667	ENSG00000163882	POLR2H	99	74.667	Homo_sapiens
ENSCSAVG00000006151	-	99	73.333	ENSAPOG00000023660	polr2h	99	73.333	Acanthochromis_polyacanthus
ENSCSAVG00000006151	-	99	74.667	ENSAMEG00000017011	POLR2H	99	74.667	Ailuropoda_melanoleuca
ENSCSAVG00000006151	-	76	69.565	ENSACIG00000013167	polr2h	100	69.565	Amphilophus_citrinellus
ENSCSAVG00000006151	-	99	73.333	ENSAOCG00000003084	polr2h	99	73.333	Amphiprion_ocellaris
ENSCSAVG00000006151	-	99	73.333	ENSAPEG00000002614	polr2h	99	73.333	Amphiprion_percula
ENSCSAVG00000006151	-	99	73.333	ENSATEG00000013227	polr2h	99	73.333	Anabas_testudineus
ENSCSAVG00000006151	-	99	74.667	ENSACAG00000002828	POLR2H	99	74.667	Anolis_carolinensis
ENSCSAVG00000006151	-	99	74.667	ENSANAG00000020244	POLR2H	99	74.667	Aotus_nancymaae
ENSCSAVG00000006151	-	99	73.333	ENSACLG00000026253	polr2h	99	73.333	Astatotilapia_calliptera
ENSCSAVG00000006151	-	99	74.000	ENSAMXG00000001800	polr2h	99	74.000	Astyanax_mexicanus
ENSCSAVG00000006151	-	99	74.667	ENSBTAG00000040199	POLR2H	99	74.667	Bos_taurus
ENSCSAVG00000006151	-	99	62.667	WBGene00017830	rpb-8	99	62.667	Caenorhabditis_elegans
ENSCSAVG00000006151	-	99	74.667	ENSCJAG00000014959	POLR2H	99	74.667	Callithrix_jacchus
ENSCSAVG00000006151	-	99	74.667	ENSCAFG00020002558	POLR2H	99	74.667	Canis_lupus_dingo
ENSCSAVG00000006151	-	99	74.667	ENSCHIG00000006695	POLR2H	99	74.667	Capra_hircus
ENSCSAVG00000006151	-	99	74.667	ENSTSYG00000007705	-	99	74.667	Carlito_syrichta
ENSCSAVG00000006151	-	99	64.667	ENSTSYG00000031988	-	99	64.667	Carlito_syrichta
ENSCSAVG00000006151	-	99	70.000	ENSTSYG00000031691	-	81	70.000	Carlito_syrichta
ENSCSAVG00000006151	-	99	74.000	ENSCPOG00000040303	POLR2H	99	74.000	Cavia_porcellus
ENSCSAVG00000006151	-	99	74.667	ENSCCAG00000035087	POLR2H	99	74.667	Cebus_capucinus
ENSCSAVG00000006151	-	99	74.667	ENSCATG00000045313	POLR2H	99	74.667	Cercocebus_atys
ENSCSAVG00000006151	-	99	74.000	ENSCLAG00000013016	POLR2H	99	74.000	Chinchilla_lanigera
ENSCSAVG00000006151	-	99	74.667	ENSCSAG00000013724	POLR2H	80	74.667	Chlorocebus_sabaeus
ENSCSAVG00000006151	-	73	72.072	ENSCHOG00000009216	POLR2H	99	72.072	Choloepus_hoffmanni
ENSCSAVG00000006151	-	99	74.667	ENSCPBG00000001462	POLR2H	99	74.667	Chrysemys_picta_bellii
ENSCSAVG00000006151	-	100	96.711	ENSCING00000011417	-	100	96.711	Ciona_intestinalis
ENSCSAVG00000006151	-	99	74.667	ENSCANG00000023708	POLR2H	99	74.667	Colobus_angolensis_palliatus
ENSCSAVG00000006151	-	99	74.667	ENSCGRG00001004900	Polr2h	99	74.667	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006151	-	99	74.667	ENSCGRG00000014304	Polr2h	99	74.667	Cricetulus_griseus_crigri
ENSCSAVG00000006151	-	99	72.000	ENSCSEG00000015264	polr2h	99	72.000	Cynoglossus_semilaevis
ENSCSAVG00000006151	-	99	74.000	ENSCVAG00000012410	polr2h	99	74.000	Cyprinodon_variegatus
ENSCSAVG00000006151	-	99	74.000	ENSDARG00000038505	polr2h	99	74.000	Danio_rerio
ENSCSAVG00000006151	-	99	74.667	ENSDNOG00000044402	POLR2H	99	74.667	Dasypus_novemcinctus
ENSCSAVG00000006151	-	99	74.667	ENSDORG00000027475	Polr2h	99	74.667	Dipodomys_ordii
ENSCSAVG00000006151	-	99	76.000	FBgn0037121	Rpb8	99	76.000	Drosophila_melanogaster
ENSCSAVG00000006151	-	59	82.609	ENSETEG00000004231	-	59	82.609	Echinops_telfairi
ENSCSAVG00000006151	-	99	62.857	ENSEBUG00000008233	POLR2H	99	62.857	Eptatretus_burgeri
ENSCSAVG00000006151	-	99	74.667	ENSEASG00005013088	POLR2H	99	74.667	Equus_asinus_asinus
ENSCSAVG00000006151	-	99	74.667	ENSECAG00000005828	POLR2H	99	74.667	Equus_caballus
ENSCSAVG00000006151	-	50	77.632	ENSEEUG00000006139	-	92	77.632	Erinaceus_europaeus
ENSCSAVG00000006151	-	99	72.667	ENSELUG00000006347	polr2h	99	72.667	Esox_lucius
ENSCSAVG00000006151	-	99	74.667	ENSFCAG00000007797	POLR2H	99	74.667	Felis_catus
ENSCSAVG00000006151	-	99	74.667	ENSFALG00000008177	POLR2H	99	74.667	Ficedula_albicollis
ENSCSAVG00000006151	-	99	74.667	ENSFDAG00000008781	POLR2H	99	74.667	Fukomys_damarensis
ENSCSAVG00000006151	-	99	74.000	ENSFHEG00000017819	polr2h	99	74.000	Fundulus_heteroclitus
ENSCSAVG00000006151	-	99	74.667	ENSGALG00000008534	POLR2H	99	74.667	Gallus_gallus
ENSCSAVG00000006151	-	99	74.000	ENSGAFG00000015424	polr2h	99	74.000	Gambusia_affinis
ENSCSAVG00000006151	-	99	74.000	ENSGACG00000009019	polr2h	99	74.000	Gasterosteus_aculeatus
ENSCSAVG00000006151	-	99	74.667	ENSGAGG00000009016	POLR2H	99	74.667	Gopherus_agassizii
ENSCSAVG00000006151	-	83	73.016	ENSGGOG00000002912	-	100	73.016	Gorilla_gorilla
ENSCSAVG00000006151	-	99	73.333	ENSHBUG00000006685	polr2h	99	73.333	Haplochromis_burtoni
ENSCSAVG00000006151	-	99	74.667	ENSHGLG00000012488	POLR2H	99	74.667	Heterocephalus_glaber_female
ENSCSAVG00000006151	-	99	74.667	ENSHGLG00100009576	POLR2H	99	74.667	Heterocephalus_glaber_male
ENSCSAVG00000006151	-	99	72.667	ENSHCOG00000010315	polr2h	99	72.667	Hippocampus_comes
ENSCSAVG00000006151	-	99	72.667	ENSHCOG00000010338	polr2h	99	72.667	Hippocampus_comes
ENSCSAVG00000006151	-	99	74.000	ENSIPUG00000024331	polr2h	99	74.000	Ictalurus_punctatus
ENSCSAVG00000006151	-	99	74.667	ENSSTOG00000008300	POLR2H	99	74.667	Ictidomys_tridecemlineatus
ENSCSAVG00000006151	-	99	74.667	ENSJJAG00000015574	Polr2h	99	74.667	Jaculus_jaculus
ENSCSAVG00000006151	-	99	74.667	ENSKMAG00000008353	polr2h	99	74.667	Kryptolebias_marmoratus
ENSCSAVG00000006151	-	99	73.333	ENSLBEG00000018905	polr2h	99	73.333	Labrus_bergylta
ENSCSAVG00000006151	-	99	74.667	ENSLACG00000015017	POLR2H	99	74.667	Latimeria_chalumnae
ENSCSAVG00000006151	-	74	70.536	ENSLOCG00000008946	polr2h	99	70.536	Lepisosteus_oculatus
ENSCSAVG00000006151	-	99	74.667	ENSLAFG00000003573	POLR2H	99	74.667	Loxodonta_africana
ENSCSAVG00000006151	-	99	74.667	ENSMFAG00000038115	POLR2H	99	74.667	Macaca_fascicularis
ENSCSAVG00000006151	-	99	74.667	ENSMMUG00000007524	POLR2H	99	74.667	Macaca_mulatta
ENSCSAVG00000006151	-	99	74.667	ENSMNEG00000037272	POLR2H	99	74.667	Macaca_nemestrina
ENSCSAVG00000006151	-	99	74.667	ENSMLEG00000039827	POLR2H	99	74.667	Mandrillus_leucophaeus
ENSCSAVG00000006151	-	100	72.368	ENSMAMG00000001923	polr2h	99	73.333	Mastacembelus_armatus
ENSCSAVG00000006151	-	99	73.333	ENSMZEG00005017494	polr2h	99	73.333	Maylandia_zebra
ENSCSAVG00000006151	-	99	74.667	ENSMAUG00000016338	Polr2h	99	74.667	Mesocricetus_auratus
ENSCSAVG00000006151	-	95	75.172	ENSMICG00000027485	-	94	75.172	Microcebus_murinus
ENSCSAVG00000006151	-	99	56.667	ENSMICG00000033578	-	99	56.667	Microcebus_murinus
ENSCSAVG00000006151	-	99	74.667	ENSMICG00000048991	-	99	74.667	Microcebus_murinus
ENSCSAVG00000006151	-	99	74.667	ENSMOCG00000004886	Polr2h	99	74.667	Microtus_ochrogaster
ENSCSAVG00000006151	-	99	73.333	ENSMMOG00000008575	polr2h	99	73.333	Mola_mola
ENSCSAVG00000006151	-	99	74.667	ENSMODG00000002570	POLR2H	99	74.667	Monodelphis_domestica
ENSCSAVG00000006151	-	99	73.333	ENSMALG00000015108	polr2h	99	73.333	Monopterus_albus
ENSCSAVG00000006151	-	99	74.667	MGP_CAROLIEiJ_G0020589	Polr2h	99	74.667	Mus_caroli
ENSCSAVG00000006151	-	99	74.667	ENSMUSG00000021018	Polr2h	99	74.667	Mus_musculus
ENSCSAVG00000006151	-	99	74.667	MGP_SPRETEiJ_G0021486	Polr2h	99	74.667	Mus_spretus
ENSCSAVG00000006151	-	99	74.667	ENSMPUG00000002852	POLR2H	99	74.667	Mustela_putorius_furo
ENSCSAVG00000006151	-	99	74.667	ENSMLUG00000022295	POLR2H	99	74.667	Myotis_lucifugus
ENSCSAVG00000006151	-	99	56.291	ENSNGAG00000015806	-	100	56.291	Nannospalax_galili
ENSCSAVG00000006151	-	99	74.667	ENSNGAG00000023997	-	99	74.667	Nannospalax_galili
ENSCSAVG00000006151	-	99	73.333	ENSNBRG00000001133	polr2h	99	73.333	Neolamprologus_brichardi
ENSCSAVG00000006151	-	99	74.667	ENSNLEG00000029447	POLR2H	99	74.667	Nomascus_leucogenys
ENSCSAVG00000006151	-	60	70.330	ENSMEUG00000014141	-	100	70.330	Notamacropus_eugenii
ENSCSAVG00000006151	-	50	78.947	ENSOPRG00000015024	-	92	78.947	Ochotona_princeps
ENSCSAVG00000006151	-	99	74.000	ENSODEG00000020005	-	99	74.000	Octodon_degus
ENSCSAVG00000006151	-	99	74.000	ENSODEG00000013008	-	99	74.000	Octodon_degus
ENSCSAVG00000006151	-	99	73.333	ENSONIG00000012493	polr2h	99	73.333	Oreochromis_niloticus
ENSCSAVG00000006151	-	99	74.667	ENSOANG00000010454	POLR2H	99	74.667	Ornithorhynchus_anatinus
ENSCSAVG00000006151	-	99	74.667	ENSOCUG00000007078	POLR2H	99	74.667	Oryctolagus_cuniculus
ENSCSAVG00000006151	-	99	73.333	ENSORLG00000023347	polr2h	99	73.333	Oryzias_latipes
ENSCSAVG00000006151	-	99	73.333	ENSORLG00020017770	polr2h	99	73.333	Oryzias_latipes_hni
ENSCSAVG00000006151	-	99	73.333	ENSORLG00015013505	polr2h	99	73.333	Oryzias_latipes_hsok
ENSCSAVG00000006151	-	99	73.333	ENSOMEG00000021100	polr2h	99	73.333	Oryzias_melastigma
ENSCSAVG00000006151	-	99	74.667	ENSOGAG00000001599	POLR2H	99	74.667	Otolemur_garnettii
ENSCSAVG00000006151	-	99	74.667	ENSOARG00000020584	POLR2H	99	74.667	Ovis_aries
ENSCSAVG00000006151	-	99	74.667	ENSPPAG00000035658	-	99	74.667	Pan_paniscus
ENSCSAVG00000006151	-	99	74.667	ENSPPRG00000004001	POLR2H	99	74.667	Panthera_pardus
ENSCSAVG00000006151	-	99	74.667	ENSPTIG00000010551	POLR2H	99	74.667	Panthera_tigris_altaica
ENSCSAVG00000006151	-	99	74.667	ENSPTRG00000047600	-	99	61.333	Pan_troglodytes
ENSCSAVG00000006151	-	99	74.667	ENSPANG00000020585	POLR2H	99	74.667	Papio_anubis
ENSCSAVG00000006151	-	99	73.333	ENSPKIG00000022836	polr2h	99	73.333	Paramormyrops_kingsleyae
ENSCSAVG00000006151	-	76	71.304	ENSPSIG00000017108	POLR2H	100	71.304	Pelodiscus_sinensis
ENSCSAVG00000006151	-	99	73.333	ENSPMGG00000004693	polr2h	93	73.333	Periophthalmus_magnuspinnatus
ENSCSAVG00000006151	-	99	74.667	ENSPMAG00000008230	-	99	74.667	Petromyzon_marinus
ENSCSAVG00000006151	-	99	74.000	ENSPFOG00000024200	polr2h	99	74.000	Poecilia_formosa
ENSCSAVG00000006151	-	99	74.000	ENSPLAG00000024033	polr2h	99	74.000	Poecilia_latipinna
ENSCSAVG00000006151	-	99	74.000	ENSPMEG00000005909	polr2h	99	74.000	Poecilia_mexicana
ENSCSAVG00000006151	-	99	74.000	ENSPREG00000007275	polr2h	99	74.000	Poecilia_reticulata
ENSCSAVG00000006151	-	99	74.667	ENSPPYG00000014357	-	99	74.667	Pongo_abelii
ENSCSAVG00000006151	-	99	54.667	ENSPCAG00000015035	-	99	54.667	Procavia_capensis
ENSCSAVG00000006151	-	99	74.667	ENSPCOG00000021194	POLR2H	99	74.667	Propithecus_coquereli
ENSCSAVG00000006151	-	99	63.333	ENSPVAG00000004869	POLR2H	99	63.333	Pteropus_vampyrus
ENSCSAVG00000006151	-	99	73.333	ENSPNYG00000020592	polr2h	99	73.333	Pundamilia_nyererei
ENSCSAVG00000006151	-	99	72.667	ENSPNAG00000010676	polr2h	99	72.667	Pygocentrus_nattereri
ENSCSAVG00000006151	-	99	74.667	ENSRNOG00000001748	LOC100912534	99	74.667	Rattus_norvegicus
ENSCSAVG00000006151	-	99	74.667	ENSRNOG00000049116	Polr2h	99	74.667	Rattus_norvegicus
ENSCSAVG00000006151	-	99	74.667	ENSRBIG00000032148	POLR2H	99	74.667	Rhinopithecus_bieti
ENSCSAVG00000006151	-	99	74.667	ENSRROG00000040465	POLR2H	99	74.667	Rhinopithecus_roxellana
ENSCSAVG00000006151	-	97	35.294	YOR224C	RPB8	99	35.294	Saccharomyces_cerevisiae
ENSCSAVG00000006151	-	99	74.667	ENSSBOG00000033101	POLR2H	99	61.333	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006151	-	84	73.228	ENSSHAG00000006304	POLR2H	91	73.228	Sarcophilus_harrisii
ENSCSAVG00000006151	-	99	74.000	ENSSFOG00015014221	polr2h	99	74.000	Scleropages_formosus
ENSCSAVG00000006151	-	99	73.333	ENSSMAG00000001049	polr2h	99	73.333	Scophthalmus_maximus
ENSCSAVG00000006151	-	99	73.333	ENSSDUG00000005936	polr2h	99	73.333	Seriola_dumerili
ENSCSAVG00000006151	-	99	73.333	ENSSLDG00000002246	polr2h	99	73.333	Seriola_lalandi_dorsalis
ENSCSAVG00000006151	-	99	74.667	ENSSARG00000003429	POLR2H	99	74.667	Sorex_araneus
ENSCSAVG00000006151	-	76	71.304	ENSSPUG00000014013	-	100	71.304	Sphenodon_punctatus
ENSCSAVG00000006151	-	99	73.333	ENSSPAG00000012297	polr2h	99	73.333	Stegastes_partitus
ENSCSAVG00000006151	-	99	74.667	ENSSSCG00000022507	POLR2H	99	74.667	Sus_scrofa
ENSCSAVG00000006151	-	94	74.825	ENSTGUG00000010383	POLR2H	99	74.825	Taeniopygia_guttata
ENSCSAVG00000006151	-	99	72.667	ENSTRUG00000007619	polr2h	99	72.667	Takifugu_rubripes
ENSCSAVG00000006151	-	99	73.333	ENSTNIG00000012183	polr2h	99	73.333	Tetraodon_nigroviridis
ENSCSAVG00000006151	-	59	81.579	ENSTBEG00000005571	-	59	81.579	Tupaia_belangeri
ENSCSAVG00000006151	-	99	74.667	ENSTTRG00000011254	POLR2H	99	74.667	Tursiops_truncatus
ENSCSAVG00000006151	-	99	74.667	ENSUAMG00000004615	POLR2H	99	74.667	Ursus_americanus
ENSCSAVG00000006151	-	99	74.667	ENSUMAG00000005255	POLR2H	99	74.667	Ursus_maritimus
ENSCSAVG00000006151	-	99	61.333	ENSVPAG00000009011	-	99	61.333	Vicugna_pacos
ENSCSAVG00000006151	-	99	74.667	ENSVVUG00000012241	POLR2H	99	74.667	Vulpes_vulpes
ENSCSAVG00000006151	-	99	73.333	ENSXETG00000017291	polr2h	99	73.333	Xenopus_tropicalis
ENSCSAVG00000006151	-	99	74.000	ENSXCOG00000003501	polr2h	99	74.000	Xiphophorus_couchianus
ENSCSAVG00000006151	-	99	74.000	ENSXMAG00000005861	polr2h	99	74.000	Xiphophorus_maculatus